RNA–Protein interactions for RNA: ENST00000479169.5

HDLBP-237, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 1,017 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-237ENST00000479169 SNAI1O95863 264 aaPredicted RBP13.23□□□□□ -0.29
HDLBP-237ENST00000479169 ATP5JP18859 108 aa13.23□□□□□ -0.29
HDLBP-237ENST00000479169 DNAJB2P25686 324 aa13.23□□□□□ -0.29
HDLBP-237ENST00000479169 ACLYP53396 1101 aa13.23□□□□□ -0.29
HDLBP-237ENST00000479169 SNRNP48Q6IEG0 339 aaKnown RBP13.23□□□□□ -0.29
HDLBP-237ENST00000479169 ANKRD33Q7Z3H0 272 aa13.23□□□□□ -0.29
HDLBP-237ENST00000479169 KLHDC9Q8NEP7 349 aa13.23□□□□□ -0.29
HDLBP-237ENST00000479169 PUS7LQ9H0K6 701 aaKnown RBP13.23□□□□□ -0.29
HDLBP-237ENST00000479169 STARD7Q9NQZ5 370 aa13.23□□□□□ -0.29
HDLBP-237ENST00000479169 ZHX1Q9UKY1 873 aaPredicted RBP13.23□□□□□ -0.29
HDLBP-237ENST00000479169 CNPY2Q9Y2B0 182 aa13.23□□□□□ -0.29
HDLBP-237ENST00000479169 NCOR1O75376 2440 aa13.23□□□□□ -0.29
HDLBP-237ENST00000479169 CHD7Q9P2D1 2997 aa13.23□□□□□ -0.29
HDLBP-237ENST00000479169 TMEM265A0A087WTH1 108 aa13.22□□□□□ -0.29
HDLBP-237ENST00000479169 ADCY6O43306 1168 aa13.22□□□□□ -0.29
HDLBP-237ENST00000479169 HMMRO75330 724 aa13.22□□□□□ -0.29
HDLBP-237ENST00000479169 COPB2P35606 906 aa13.22□□□□□ -0.29
HDLBP-237ENST00000479169 SLC4A3P48751 1232 aa13.22□□□□□ -0.29
HDLBP-237ENST00000479169 KCNA10Q16322 511 aa13.22□□□□□ -0.29
HDLBP-237ENST00000479169 CCSAPQ6IQ19 270 aaPredicted RBP13.22□□□□□ -0.29
HDLBP-237ENST00000479169 DDRGK1Q96HY6 314 aa13.22□□□□□ -0.29
HDLBP-237ENST00000479169 SLF1Q9BQI6 1058 aa13.22□□□□□ -0.29
HDLBP-237ENST00000479169 TSEN34Q9BSV6 310 aaKnown RBP13.22□□□□□ -0.29
HDLBP-237ENST00000479169 TEX13BQ9BXU2 312 aa13.22□□□□□ -0.29
HDLBP-237ENST00000479169 SYNGAP1Q96PV0 1343 aa13.21□□□□□ -0.29
HDLBP-237ENST00000479169 REV3LO60673 3130 aa13.21□□□□□ -0.29
HDLBP-237ENST00000479169 DNAJC25-GNG10A0A024R161 153 aa13.21□□□□□ -0.29
HDLBP-237ENST00000479169 DCDC2CA8MYV0 355 aa13.21□□□□□ -0.29
HDLBP-237ENST00000479169 RAB11FIP3O75154 756 aa13.21□□□□□ -0.29
HDLBP-237ENST00000479169 NDUFB10O96000 172 aa13.21□□□□□ -0.29
HDLBP-237ENST00000479169 RASA1P20936 1047 aa13.21□□□□□ -0.29
HDLBP-237ENST00000479169 UBE3CQ15386 1083 aa13.21□□□□□ -0.29
HDLBP-237ENST00000479169 RPAP2Q8IXW5 612 aaPredicted RBP13.21□□□□□ -0.29
HDLBP-237ENST00000479169 CPXCR1Q8N123 301 aa13.21□□□□□ -0.29
HDLBP-237ENST00000479169 DDX11Q96FC9 970 aa13.21□□□□□ -0.29
HDLBP-237ENST00000479169 TOX2Q96NM4 488 aa13.21□□□□□ -0.29
HDLBP-237ENST00000479169 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.21□□□□□ -0.29
HDLBP-237ENST00000479169 ZBTB40Q9NUA8 1239 aa13.21□□□□□ -0.29
HDLBP-237ENST00000479169 TBX21Q9UL17 535 aa13.21□□□□□ -0.29
HDLBP-237ENST00000479169 FAM184BQ9ULE4 1060 aa13.21□□□□□ -0.29
HDLBP-237ENST00000479169 COG6Q9Y2V7 657 aa13.21□□□□□ -0.29
HDLBP-237ENST00000479169 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.2□□□□□ -0.3
HDLBP-237ENST00000479169 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.2□□□□□ -0.3
HDLBP-237ENST00000479169 MOXD2PA6NHM9 499 aa13.2□□□□□ -0.3
HDLBP-237ENST00000479169 GRXCR1A8MXD5 290 aa13.2□□□□□ -0.3
HDLBP-237ENST00000479169 F5H6K3 240 aa13.2□□□□□ -0.3
HDLBP-237ENST00000479169 SMARCA5O60264 1052 aaPredicted RBP13.2□□□□□ -0.3
HDLBP-237ENST00000479169 DUSP11O75319 330 aaKnown RBP13.2□□□□□ -0.3
HDLBP-237ENST00000479169 TIMP1P01033 207 aa13.2□□□□□ -0.3
HDLBP-237ENST00000479169 KLRC3Q07444 240 aa13.2□□□□□ -0.3
HDLBP-237ENST00000479169 MAMDC4Q6UXC1 1216 aa13.2□□□□□ -0.3
HDLBP-237ENST00000479169 MSL3Q8N5Y2 521 aaKnown RBP13.2□□□□□ -0.3
HDLBP-237ENST00000479169 NUP133Q8WUM0 1156 aa13.2□□□□□ -0.3
HDLBP-237ENST00000479169 TIFAQ96CG3 184 aa13.2□□□□□ -0.3
HDLBP-237ENST00000479169 FGD4Q96M96 766 aa13.2□□□□□ -0.3
HDLBP-237ENST00000479169 ZNF576Q9H609 170 aa13.2□□□□□ -0.3
HDLBP-237ENST00000479169 RAVER2Q9HCJ3 691 aaKnown RBP13.2□□□□□ -0.3
HDLBP-237ENST00000479169 PRDM6Q9NQX0 595 aa13.2□□□□□ -0.3
HDLBP-237ENST00000479169 ARPP21Q9UBL0 812 aaPredicted RBP13.2□□□□□ -0.3
HDLBP-237ENST00000479169 LRRC37A2A6NM11 1700 aa13.19□□□□□ -0.3
HDLBP-237ENST00000479169 MINDY4BA8MYZ0 360 aa13.19□□□□□ -0.3
HDLBP-237ENST00000479169 C6orf222P0C671 652 aaPredicted RBP13.19□□□□□ -0.3
HDLBP-237ENST00000479169 PBX2P40425 430 aa13.19□□□□□ -0.3
HDLBP-237ENST00000479169 ACVR2BQ13705 512 aa13.19□□□□□ -0.3
HDLBP-237ENST00000479169 TMEM240Q5SV17 173 aa13.19□□□□□ -0.3
HDLBP-237ENST00000479169 C16orf59Q7L2K0 433 aa13.19□□□□□ -0.3
HDLBP-237ENST00000479169 KIFC2Q96AC6 838 aa13.19□□□□□ -0.3
HDLBP-237ENST00000479169 STRBPQ96SI9 672 aaKnown RBP13.19□□□□□ -0.3
HDLBP-237ENST00000479169 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.19□□□□□ -0.3
HDLBP-237ENST00000479169 NYAP2Q9P242 653 aa13.19□□□□□ -0.3
HDLBP-237ENST00000479169 GSG1L2A8MUP6 293 aa13.18□□□□□ -0.3
HDLBP-237ENST00000479169 ASGR1P07306 291 aa13.18□□□□□ -0.3
HDLBP-237ENST00000479169 ACRP10323 421 aa13.18□□□□□ -0.3
HDLBP-237ENST00000479169 CSF2RAP15509 400 aa13.18□□□□□ -0.3
HDLBP-237ENST00000479169 CST5P28325 142 aaPredicted RBP13.18□□□□□ -0.3
HDLBP-237ENST00000479169 CDK7P50613 346 aa13.18□□□□□ -0.3
HDLBP-237ENST00000479169 CCDC144BQ3MJ40 725 aa13.18□□□□□ -0.3
HDLBP-237ENST00000479169 SBK1Q52WX2 424 aa13.18□□□□□ -0.3
HDLBP-237ENST00000479169 MFSD5Q6N075 450 aa13.18□□□□□ -0.3
HDLBP-237ENST00000479169 ZNF467Q7Z7K2 595 aaPredicted RBP13.18□□□□□ -0.3
HDLBP-237ENST00000479169 PRPF38AQ8NAV1 312 aaKnown RBP13.18□□□□□ -0.3
HDLBP-237ENST00000479169 VTI1AQ96AJ9 217 aa13.18□□□□□ -0.3
HDLBP-237ENST00000479169 GLT1D1Q96MS3 346 aa13.18□□□□□ -0.3
HDLBP-237ENST00000479169 PPP1R12CQ9BZL4 782 aa13.18□□□□□ -0.3
HDLBP-237ENST00000479169 MKNK2Q9HBH9 465 aa13.18□□□□□ -0.3
HDLBP-237ENST00000479169 CLIP2Q9UDT6 1046 aa13.18□□□□□ -0.3
HDLBP-237ENST00000479169 DDX19BQ9UMR2 479 aa13.18□□□□□ -0.3
HDLBP-237ENST00000479169 LCTP09848 1927 aa13.17□□□□□ -0.3
HDLBP-237ENST00000479169 ELP1O95163 1332 aa13.17□□□□□ -0.3
HDLBP-237ENST00000479169 MROH7Q68CQ1 1323 aa13.17□□□□□ -0.3
HDLBP-237ENST00000479169 IGKV6D-41A0A0C4DH26 115 aa13.17□□□□□ -0.3
HDLBP-237ENST00000479169 ATP2A1O14983 1001 aa13.17□□□□□ -0.3
HDLBP-237ENST00000479169 ZBED4O75132 1171 aa13.17□□□□□ -0.3
HDLBP-237ENST00000479169 GJA9P57773 515 aa13.17□□□□□ -0.3
HDLBP-237ENST00000479169 PPIGQ13427 754 aaKnown RBP eCLIP13.17□□□□□ -0.33e-13■□□□□ 10
HDLBP-237ENST00000479169 ZSCAN25Q6NSZ9 544 aa13.17□□□□□ -0.3
HDLBP-237ENST00000479169 CCDC129Q6ZRS4 1044 aa13.17□□□□□ -0.3
HDLBP-237ENST00000479169 ARMCX2Q7L311 632 aa13.17□□□□□ -0.3
HDLBP-237ENST00000479169 LRRC47Q8N1G4 583 aaKnown RBP13.17□□□□□ -0.3
HDLBP-237ENST00000479169 PPM1EQ8WY54 764 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms