RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 ORC3Q9UBD5 711 aaPredicted RBP15.22■□□□□ 0.03
CHD3-210ENST00000479080 PRR12Q9ULL5 1215 aa15.22■□□□□ 0.03
CHD3-210ENST00000479080 A0A0G2JMZ2 1700 aa15.21■□□□□ 0.03
CHD3-210ENST00000479080 CCDC196A0A1B0GTZ2 297 aa15.21■□□□□ 0.03
CHD3-210ENST00000479080 CPLX1O14810 134 aa15.21■□□□□ 0.03
CHD3-210ENST00000479080 ADAMTS3O15072 1205 aa15.21■□□□□ 0.03
CHD3-210ENST00000479080 SMARCA1P28370 1054 aa15.21■□□□□ 0.03
CHD3-210ENST00000479080 GNAQP50148 359 aa15.21■□□□□ 0.03
CHD3-210ENST00000479080 CATSPERGQ6ZRH7 1159 aa15.21■□□□□ 0.03
CHD3-210ENST00000479080 PROCA1Q8NCQ7 364 aaPredicted RBP15.21■□□□□ 0.03
CHD3-210ENST00000479080 PIBF1Q8WXW3 757 aa15.21■□□□□ 0.03
CHD3-210ENST00000479080 SMC3Q9UQE7 1217 aa15.21■□□□□ 0.03
CHD3-210ENST00000479080 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.21■□□□□ 0.03
CHD3-210ENST00000479080 V9GY48 417 aaPredicted RBP15.21■□□□□ 0.03
CHD3-210ENST00000479080 DHX16O60231 1041 aaKnown RBP15.2■□□□□ 0.02
CHD3-210ENST00000479080 ZBTB48P10074 688 aaPredicted RBP15.2■□□□□ 0.02
CHD3-210ENST00000479080 ZNF157P51786 506 aaPredicted RBP15.2■□□□□ 0.02
CHD3-210ENST00000479080 SSRP1Q08945 709 aaKnown RBP15.2■□□□□ 0.02
CHD3-210ENST00000479080 OTUD7BQ6GQQ9 843 aa15.2■□□□□ 0.02
CHD3-210ENST00000479080 GADL1Q6ZQY3 521 aa15.2■□□□□ 0.02
CHD3-210ENST00000479080 REPS2Q8NFH8 660 aa15.2■□□□□ 0.02
CHD3-210ENST00000479080 PTPN18Q99952 460 aa15.2■□□□□ 0.02
CHD3-210ENST00000479080 LZTS2Q9BRK4 669 aa15.2■□□□□ 0.02
CHD3-210ENST00000479080 VAT1LQ9HCJ6 419 aa15.2■□□□□ 0.02
CHD3-210ENST00000479080 TMOD4Q9NZQ9 345 aa15.2■□□□□ 0.02
CHD3-210ENST00000479080 FEM1BQ9UK73 627 aa15.2■□□□□ 0.02
CHD3-210ENST00000479080 PPP1R9AQ9ULJ8 1098 aa15.2■□□□□ 0.02
CHD3-210ENST00000479080 ZNF536O15090 1300 aa15.19■□□□□ 0.02
CHD3-210ENST00000479080 TESPA1A2RU30 521 aaPredicted RBP15.19■□□□□ 0.02
CHD3-210ENST00000479080 SPDYE16A6NNV3 312 aaPredicted RBP15.19■□□□□ 0.02
CHD3-210ENST00000479080 CDKL5O76039 1030 aa15.19■□□□□ 0.02
CHD3-210ENST00000479080 APLP1P51693 650 aa15.19■□□□□ 0.02
CHD3-210ENST00000479080 STAT2P52630 851 aa15.19■□□□□ 0.02
CHD3-210ENST00000479080 FOSBP53539 338 aa15.19■□□□□ 0.02
CHD3-210ENST00000479080 HMGN5P82970 282 aaKnown RBP15.19■□□□□ 0.02
CHD3-210ENST00000479080 SNAPC2Q13487 334 aa15.19■□□□□ 0.02
CHD3-210ENST00000479080 NPY5RQ15761 445 aa15.19■□□□□ 0.02
CHD3-210ENST00000479080 CDC37Q16543 378 aaPredicted RBP15.19■□□□□ 0.02
CHD3-210ENST00000479080 PFKFB3Q16875 520 aaPredicted RBP15.19■□□□□ 0.02
CHD3-210ENST00000479080 QRICH1Q2TAL8 776 aa15.19■□□□□ 0.02
CHD3-210ENST00000479080 WWC2Q6AWC2 1192 aa15.19■□□□□ 0.02
CHD3-210ENST00000479080 HOMER1Q86YM7 354 aa15.19■□□□□ 0.02
CHD3-210ENST00000479080 GPKOWQ92917 476 aaPredicted RBP eCLIP15.19■□□□□ 0.02
CHD3-210ENST00000479080 ATG4CQ96DT6 458 aa15.19■□□□□ 0.02
CHD3-210ENST00000479080 HHIPL1Q96JK4 782 aa15.19■□□□□ 0.02
CHD3-210ENST00000479080 TANGO6Q9C0B7 1094 aa15.19■□□□□ 0.02
CHD3-210ENST00000479080 RANBP17Q9H2T7 1088 aaKnown RBP15.19■□□□□ 0.02
CHD3-210ENST00000479080 ISY1Q9ULR0 285 aaKnown RBP15.19■□□□□ 0.02
CHD3-210ENST00000479080 ADAMTS5Q9UNA0 930 aa15.19■□□□□ 0.02
CHD3-210ENST00000479080 AGTPBP1Q9UPW5 1226 aa15.19■□□□□ 0.02
CHD3-210ENST00000479080 ZDHHC9Q9Y397 364 aa15.19■□□□□ 0.02
CHD3-210ENST00000479080 CCL15-CCL14A0A0B4J2E2 113 aa15.18■□□□□ 0.02
CHD3-210ENST00000479080 RASSF10A6NK89 507 aa15.18■□□□□ 0.02
CHD3-210ENST00000479080 USP17L15C9J2P7 530 aa15.18■□□□□ 0.02
CHD3-210ENST00000479080 BTBD19C9JJ37 291 aa15.18■□□□□ 0.02
CHD3-210ENST00000479080 USP17L13C9JLJ4 530 aa15.18■□□□□ 0.02
CHD3-210ENST00000479080 USP17L11C9JVI0 530 aa15.18■□□□□ 0.02
CHD3-210ENST00000479080 USP17L18D6R9N7 530 aa15.18■□□□□ 0.02
CHD3-210ENST00000479080 USP17L22D6RA61 530 aa15.18■□□□□ 0.02
CHD3-210ENST00000479080 USP17L17D6RBQ6 530 aa15.18■□□□□ 0.02
CHD3-210ENST00000479080 USP17L19D6RCP7 530 aa15.18■□□□□ 0.02
CHD3-210ENST00000479080 USP17L20D6RJB6 530 aa15.18■□□□□ 0.02
CHD3-210ENST00000479080 PEX10O60683 326 aa15.18■□□□□ 0.02
CHD3-210ENST00000479080 DEXIO95424 95 aa15.18■□□□□ 0.02
CHD3-210ENST00000479080 HOXA7P31268 230 aaPredicted RBP15.18■□□□□ 0.02
CHD3-210ENST00000479080 DSG3P32926 999 aa15.18■□□□□ 0.02
CHD3-210ENST00000479080 HTRA3P83110 453 aa15.18■□□□□ 0.02
CHD3-210ENST00000479080 USP17L24Q0WX57 530 aa15.18■□□□□ 0.02
CHD3-210ENST00000479080 CCL15Q16663 113 aa15.18■□□□□ 0.02
CHD3-210ENST00000479080 CYP4F22Q6NT55 531 aa15.18■□□□□ 0.02
CHD3-210ENST00000479080 CPLX2Q6PUV4 134 aaKnown RBP15.18■□□□□ 0.02
CHD3-210ENST00000479080 FAM160B2Q86V87 743 aa15.18■□□□□ 0.02
CHD3-210ENST00000479080 FAM43AQ8N2R8 423 aa15.18■□□□□ 0.02
CHD3-210ENST00000479080 KIFC2Q96AC6 838 aa15.18■□□□□ 0.02
CHD3-210ENST00000479080 SLF1Q9BQI6 1058 aa15.18■□□□□ 0.02
CHD3-210ENST00000479080 ALG1Q9BT22 464 aa15.18■□□□□ 0.02
CHD3-210ENST00000479080 CREBZFQ9NS37 354 aa15.18■□□□□ 0.02
CHD3-210ENST00000479080 ABT1Q9ULW3 272 aaKnown RBP15.18■□□□□ 0.02
CHD3-210ENST00000479080 BAZ2BQ9UIF8 2168 aaKnown RBP15.17■□□□□ 0.02
CHD3-210ENST00000479080 STXBP3O00186 592 aa15.17■□□□□ 0.02
CHD3-210ENST00000479080 IGF2BP3O00425 579 aaKnown RBP eCLIP15.17■□□□□ 0.02
CHD3-210ENST00000479080 ZBTB5O15062 677 aa15.17■□□□□ 0.02
CHD3-210ENST00000479080 CNMDO75829 334 aa15.17■□□□□ 0.02
CHD3-210ENST00000479080 FLOT1O75955 427 aa15.17■□□□□ 0.02
CHD3-210ENST00000479080 SCG2P13521 617 aa15.17■□□□□ 0.02
CHD3-210ENST00000479080 SYT1P21579 422 aa15.17■□□□□ 0.02
CHD3-210ENST00000479080 GTF2A2P52657 109 aa15.17■□□□□ 0.02
CHD3-210ENST00000479080 ASCC2Q9H1I8 757 aaPredicted RBP15.17■□□□□ 0.02
CHD3-210ENST00000479080 VPS54Q9P1Q0 977 aa15.17■□□□□ 0.02
CHD3-210ENST00000479080 MTMR6Q9Y217 621 aa15.17■□□□□ 0.02
CHD3-210ENST00000479080 OPLAHO14841 1288 aa15.16■□□□□ 0.02
CHD3-210ENST00000479080 HSP90AA1P07900 732 aaKnown RBP15.16■□□□□ 0.02
CHD3-210ENST00000479080 CETPP11597 493 aa15.16■□□□□ 0.02
CHD3-210ENST00000479080 GUCY1B3Q02153 619 aa15.16■□□□□ 0.02
CHD3-210ENST00000479080 SAMD1Q6SPF0 538 aaPredicted RBP15.16■□□□□ 0.02
CHD3-210ENST00000479080 TRIM22Q8IYM9 498 aa15.16■□□□□ 0.02
CHD3-210ENST00000479080 CHURC1Q8WUH1 139 aa15.16■□□□□ 0.02
CHD3-210ENST00000479080 COA7Q96BR5 231 aa15.16■□□□□ 0.02
CHD3-210ENST00000479080 RRP36Q96EU6 259 aaKnown RBP15.16■□□□□ 0.02
CHD3-210ENST00000479080 P2RX7Q99572 595 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms