RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 CYP2C19P33261 490 aa22.21■■□□□ 1.15
SREBF1-212ENST00000478616 RRP12Q5JTH9 1297 aaKnown RBP22.21■■□□□ 1.15
SREBF1-212ENST00000478616 ABRAQ8N0Z2 381 aa22.21■■□□□ 1.15
SREBF1-212ENST00000478616 PRPF38AQ8NAV1 312 aaKnown RBP22.21■■□□□ 1.15
SREBF1-212ENST00000478616 TMEM47Q9BQJ4 181 aa22.21■■□□□ 1.15
SREBF1-212ENST00000478616 OGDHLQ9ULD0 1010 aa22.21■■□□□ 1.15
SREBF1-212ENST00000478616 STX8Q9UNK0 236 aa22.21■■□□□ 1.15
SREBF1-212ENST00000478616 TAF6LQ9Y6J9 622 aa22.21■■□□□ 1.15
SREBF1-212ENST00000478616 PTH1RQ03431 593 aa22.2■■□□□ 1.14
SREBF1-212ENST00000478616 PRPF38BQ5VTL8 546 aaKnown RBP22.2■■□□□ 1.14
SREBF1-212ENST00000478616 KCTD1Q719H9 257 aa22.2■■□□□ 1.14
SREBF1-212ENST00000478616 TRMT44Q8IYL2 757 aaKnown RBP22.2■■□□□ 1.14
SREBF1-212ENST00000478616 FEM1BQ9UK73 627 aa22.2■■□□□ 1.14
SREBF1-212ENST00000478616 IVNS1ABPQ9Y6Y0 642 aa22.2■■□□□ 1.14
SREBF1-212ENST00000478616 TMEM232C9JQI7 657 aa22.19■■□□□ 1.14
SREBF1-212ENST00000478616 FARP2O94887 1054 aaPredicted RBP22.19■■□□□ 1.14
SREBF1-212ENST00000478616 SLC25A27O95847 323 aa22.19■■□□□ 1.14
SREBF1-212ENST00000478616 PGK2P07205 417 aa22.19■■□□□ 1.14
SREBF1-212ENST00000478616 CYBAP13498 195 aa22.19■■□□□ 1.14
SREBF1-212ENST00000478616 TAL1P17542 331 aaPredicted RBP22.19■■□□□ 1.14
SREBF1-212ENST00000478616 MFAP1P55081 439 aaKnown RBP22.19■■□□□ 1.14
SREBF1-212ENST00000478616 TTBK2Q6IQ55 1244 aa22.19■■□□□ 1.14
SREBF1-212ENST00000478616 KIFC2Q96AC6 838 aa22.19■■□□□ 1.14
SREBF1-212ENST00000478616 FGD4Q96M96 766 aa22.19■■□□□ 1.14
SREBF1-212ENST00000478616 RAVER2Q9HCJ3 691 aaKnown RBP22.19■■□□□ 1.14
SREBF1-212ENST00000478616 ZNF792Q3KQV3 632 aa22.18■■□□□ 1.14
SREBF1-212ENST00000478616 OLFML2BQ68BL8 750 aa22.18■■□□□ 1.14
SREBF1-212ENST00000478616 SNRNP48Q6IEG0 339 aaKnown RBP22.18■■□□□ 1.14
SREBF1-212ENST00000478616 MFSD6Q6ZSS7 791 aa22.18■■□□□ 1.14
SREBF1-212ENST00000478616 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.18■■□□□ 1.14
SREBF1-212ENST00000478616 MAML3Q96JK9 1138 aa22.18■■□□□ 1.14
SREBF1-212ENST00000478616 TEX13BQ9BXU2 312 aa22.18■■□□□ 1.14
SREBF1-212ENST00000478616 CWC22Q9HCG8 908 aaKnown RBP22.18■■□□□ 1.14
SREBF1-212ENST00000478616 DNAJC25-GNG10A0A024R161 153 aa22.17■■□□□ 1.14
SREBF1-212ENST00000478616 PLA2G6O60733 806 aa22.17■■□□□ 1.14
SREBF1-212ENST00000478616 TFRCP02786 760 aaKnown RBP22.17■■□□□ 1.14
SREBF1-212ENST00000478616 SNAP25P60880 206 aa22.17■■□□□ 1.14
SREBF1-212ENST00000478616 PAWRQ96IZ0 340 aaKnown RBP22.17■■□□□ 1.14
SREBF1-212ENST00000478616 ZKSCAN3Q9BRR0 538 aa22.17■■□□□ 1.14
SREBF1-212ENST00000478616 TOMM22Q9NS69 142 aa22.17■■□□□ 1.14
SREBF1-212ENST00000478616 RAD50Q92878 1312 aa22.16■■□□□ 1.14
SREBF1-212ENST00000478616 B4E1Z4 1266 aa22.16■■□□□ 1.14
SREBF1-212ENST00000478616 ZNF213O14771 459 aa22.16■■□□□ 1.14
SREBF1-212ENST00000478616 SGSM2O43147 1006 aa22.16■■□□□ 1.14
SREBF1-212ENST00000478616 SNHG28P0DPA3 235 aa22.16■■□□□ 1.14
SREBF1-212ENST00000478616 TOP1P11387 765 aaKnown RBP22.16■■□□□ 1.14
SREBF1-212ENST00000478616 PCP11498 1178 aaKnown RBP22.16■■□□□ 1.14
SREBF1-212ENST00000478616 FCER1AP12319 257 aa22.16■■□□□ 1.14
SREBF1-212ENST00000478616 SLC1A4P43007 532 aa22.16■■□□□ 1.14
SREBF1-212ENST00000478616 DPP9Q86TI2 863 aa22.16■■□□□ 1.14
SREBF1-212ENST00000478616 CPXCR1Q8N123 301 aa22.16■■□□□ 1.14
SREBF1-212ENST00000478616 MMP19Q99542 508 aa22.16■■□□□ 1.14
SREBF1-212ENST00000478616 PRR12Q9ULL5 1215 aa22.16■■□□□ 1.14
SREBF1-212ENST00000478616 PRAMEF19Q5SWL8 479 aa22.15■■□□□ 1.14
SREBF1-212ENST00000478616 BTNL9Q6UXG8 535 aa22.15■■□□□ 1.14
SREBF1-212ENST00000478616 LRRC37A2A6NM11 1700 aa22.14■■□□□ 1.14
SREBF1-212ENST00000478616 PFASO15067 1338 aa22.14■■□□□ 1.14
SREBF1-212ENST00000478616 KDM4AO75164 1064 aa22.14■■□□□ 1.13
SREBF1-212ENST00000478616 PDHBP11177 359 aa22.14■■□□□ 1.13
SREBF1-212ENST00000478616 STAT2P52630 851 aa22.14■■□□□ 1.13
SREBF1-212ENST00000478616 COL9A3Q14050 684 aaPredicted RBP22.14■■□□□ 1.13
SREBF1-212ENST00000478616 MFSD14CQ5VZR4 134 aa22.14■■□□□ 1.13
SREBF1-212ENST00000478616 DCAF4Q8WV16 495 aa22.14■■□□□ 1.13
SREBF1-212ENST00000478616 AGBL1Q96MI9 1066 aa22.14■■□□□ 1.13
SREBF1-212ENST00000478616 ZSWIM5Q9P217 1185 aa22.14■■□□□ 1.13
SREBF1-212ENST00000478616 MTMR7Q9Y216 660 aa22.14■■□□□ 1.13
SREBF1-212ENST00000478616 ZBED4O75132 1171 aa22.13■■□□□ 1.13
SREBF1-212ENST00000478616 CYP21A2P08686 494 aa22.13■■□□□ 1.13
SREBF1-212ENST00000478616 COL6A1P12109 1028 aa22.13■■□□□ 1.13
SREBF1-212ENST00000478616 SLC16A2P36021 539 aa22.13■■□□□ 1.13
SREBF1-212ENST00000478616 OAZ1P54368 228 aa22.13■■□□□ 1.13
SREBF1-212ENST00000478616 STOX1Q6ZVD7 989 aa22.13■■□□□ 1.13
SREBF1-212ENST00000478616 FAM160B2Q86V87 743 aa22.13■■□□□ 1.13
SREBF1-212ENST00000478616 ANKLE1Q8NAG6 615 aa22.13■■□□□ 1.13
SREBF1-212ENST00000478616 ANKS1AQ92625 1134 aa22.13■■□□□ 1.13
SREBF1-212ENST00000478616 RNF41Q9H4P4 317 aaPredicted RBP22.13■■□□□ 1.13
SREBF1-212ENST00000478616 FRMPD2Q68DX3 1309 aaPredicted RBP22.12■■□□□ 1.13
SREBF1-212ENST00000478616 PPP4R3BQ5MIZ7 849 aa22.12■■□□□ 1.13
SREBF1-212ENST00000478616 CYB5R4Q7L1T6 521 aa22.12■■□□□ 1.13
SREBF1-212ENST00000478616 CENPQQ7L2Z9 268 aaPredicted RBP22.12■■□□□ 1.13
SREBF1-212ENST00000478616 ESR2Q92731 530 aa22.12■■□□□ 1.13
SREBF1-212ENST00000478616 TTC14Q96N46 770 aa22.12■■□□□ 1.13
SREBF1-212ENST00000478616 DDX20Q9UHI6 824 aaKnown RBP22.12■■□□□ 1.13
SREBF1-212ENST00000478616 DIS3Q9Y2L1 958 aaKnown RBP22.12■■□□□ 1.13
SREBF1-212ENST00000478616 ASTN1O14525 1302 aa22.11■■□□□ 1.13
SREBF1-212ENST00000478616 H0YGN5 161 aa22.11■■□□□ 1.13
SREBF1-212ENST00000478616 CAPN2P17655 700 aa22.11■■□□□ 1.13
SREBF1-212ENST00000478616 COPB2P35606 906 aa22.11■■□□□ 1.13
SREBF1-212ENST00000478616 ZNF543Q08ER8 600 aa22.11■■□□□ 1.13
SREBF1-212ENST00000478616 IMMTQ16891 758 aaKnown RBP22.11■■□□□ 1.13
SREBF1-212ENST00000478616 ENAHQ8N8S7 591 aaPredicted RBP22.11■■□□□ 1.13
SREBF1-212ENST00000478616 CHURC1Q8WUH1 139 aa22.11■■□□□ 1.13
SREBF1-212ENST00000478616 RANBP17Q9H2T7 1088 aaKnown RBP22.11■■□□□ 1.13
SREBF1-212ENST00000478616 SNAI1O95863 264 aaPredicted RBP22.1■■□□□ 1.13
SREBF1-212ENST00000478616 ZNF865P0CJ78 1059 aaPredicted RBP22.1■■□□□ 1.13
SREBF1-212ENST00000478616 KCTD2Q14681 263 aa22.1■■□□□ 1.13
SREBF1-212ENST00000478616 SEC23AQ15436 765 aa22.1■■□□□ 1.13
SREBF1-212ENST00000478616 MUM1L1Q5H9M0 696 aa22.1■■□□□ 1.13
SREBF1-212ENST00000478616 DGKHQ86XP1 1220 aa22.1■■□□□ 1.13
SREBF1-212ENST00000478616 TINF2Q9BSI4 451 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms