RNA–Protein interactions for RNA: ENST00000477991.1

SCUBE1-206, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 3

Gene SCUBE1, Length 489 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-206ENST00000477991 ZNF444Q8N0Y2 327 aaPredicted RBP12.4□□□□□ -0.42
SCUBE1-206ENST00000477991 GMCL1P1Q8NEA9 526 aa12.4□□□□□ -0.42
SCUBE1-206ENST00000477991 NEDD1Q8NHV4 660 aa12.4□□□□□ -0.42
SCUBE1-206ENST00000477991 CEP95Q96GE4 821 aa12.4□□□□□ -0.42
SCUBE1-206ENST00000477991 SEC62Q99442 399 aaKnown RBP12.4□□□□□ -0.42
SCUBE1-206ENST00000477991 SLC38A10Q9HBR0 1119 aa12.4□□□□□ -0.42
SCUBE1-206ENST00000477991 ZNF287Q9HBT7 754 aa12.4□□□□□ -0.42
SCUBE1-206ENST00000477991 CLIP2Q9UDT6 1046 aa12.4□□□□□ -0.42
SCUBE1-206ENST00000477991 ATP11BQ9Y2G3 1177 aa12.4□□□□□ -0.42
SCUBE1-206ENST00000477991 STXBP5LQ9Y2K9 1186 aa12.4□□□□□ -0.42
SCUBE1-206ENST00000477991 SYNGAP1Q96PV0 1343 aa12.39□□□□□ -0.43
SCUBE1-206ENST00000477991 ERC2O15083 957 aa12.39□□□□□ -0.43
SCUBE1-206ENST00000477991 ADAMTS4O75173 837 aa12.39□□□□□ -0.43
SCUBE1-206ENST00000477991 SNAI1O95863 264 aaPredicted RBP12.39□□□□□ -0.43
SCUBE1-206ENST00000477991 TTLL1O95922 423 aa12.39□□□□□ -0.43
SCUBE1-206ENST00000477991 RARBP10826 455 aa12.39□□□□□ -0.43
SCUBE1-206ENST00000477991 AKR1A1P14550 325 aa12.39□□□□□ -0.43
SCUBE1-206ENST00000477991 TDO2P48775 406 aa12.39□□□□□ -0.43
SCUBE1-206ENST00000477991 OAZ1P54368 228 aa12.39□□□□□ -0.43
SCUBE1-206ENST00000477991 TRIM60Q495X7 471 aa12.39□□□□□ -0.43
SCUBE1-206ENST00000477991 ZMYM1Q5SVZ6 1142 aa12.39□□□□□ -0.43
SCUBE1-206ENST00000477991 SNRNP48Q6IEG0 339 aaKnown RBP12.39□□□□□ -0.43
SCUBE1-206ENST00000477991 STK11IPQ8N1F8 1099 aa12.39□□□□□ -0.43
SCUBE1-206ENST00000477991 OTUD7AQ8TE49 926 aaPredicted RBP12.39□□□□□ -0.43
SCUBE1-206ENST00000477991 XPNPEP3Q9NQH7 507 aa12.39□□□□□ -0.43
SCUBE1-206ENST00000477991 PDLIM7Q9NR12 457 aa12.39□□□□□ -0.43
SCUBE1-206ENST00000477991 PRKAG2Q9UGJ0 569 aa12.39□□□□□ -0.43
SCUBE1-206ENST00000477991 FEM1BQ9UK73 627 aa12.39□□□□□ -0.43
SCUBE1-206ENST00000477991 PRUNE2Q8WUY3 3088 aa12.39□□□□□ -0.43
SCUBE1-206ENST00000477991 TRIM43BA6NCK2 446 aa12.38□□□□□ -0.43
SCUBE1-206ENST00000477991 FOXP2O15409 715 aa12.38□□□□□ -0.43
SCUBE1-206ENST00000477991 RAD21O60216 631 aa12.38□□□□□ -0.43
SCUBE1-206ENST00000477991 PRDM1O75626 825 aa12.38□□□□□ -0.43
SCUBE1-206ENST00000477991 CCSAPQ6IQ19 270 aaPredicted RBP12.38□□□□□ -0.43
SCUBE1-206ENST00000477991 SH3RF1Q7Z6J0 888 aa12.38□□□□□ -0.43
SCUBE1-206ENST00000477991 RNF180Q86T96 592 aa12.38□□□□□ -0.43
SCUBE1-206ENST00000477991 SLC17A8Q8NDX2 589 aa12.38□□□□□ -0.43
SCUBE1-206ENST00000477991 TRIM43Q96BQ3 446 aaPredicted RBP12.38□□□□□ -0.43
SCUBE1-206ENST00000477991 FGD4Q96M96 766 aa12.38□□□□□ -0.43
SCUBE1-206ENST00000477991 TSEN34Q9BSV6 310 aaKnown RBP12.38□□□□□ -0.43
SCUBE1-206ENST00000477991 NACAP1Q9BZK3 213 aa12.38□□□□□ -0.43
SCUBE1-206ENST00000477991 A0A1W2PQ45 241 aaPredicted RBP12.37□□□□□ -0.43
SCUBE1-206ENST00000477991 A0A1W2PQY0 241 aa12.37□□□□□ -0.43
SCUBE1-206ENST00000477991 ZBED4O75132 1171 aa12.37□□□□□ -0.43
SCUBE1-206ENST00000477991 PGK1P00558 417 aa12.37□□□□□ -0.43
SCUBE1-206ENST00000477991 APPP05067 770 aa12.37□□□□□ -0.43
SCUBE1-206ENST00000477991 FDX1P10109 184 aa12.37□□□□□ -0.43
SCUBE1-206ENST00000477991 NOVP48745 357 aa12.37□□□□□ -0.43
SCUBE1-206ENST00000477991 TLE2Q04725 743 aa12.37□□□□□ -0.43
SCUBE1-206ENST00000477991 PDE4BQ07343 736 aa12.37□□□□□ -0.43
SCUBE1-206ENST00000477991 PPARAQ07869 468 aa12.37□□□□□ -0.43
SCUBE1-206ENST00000477991 KLHDC9Q8NEP7 349 aa12.37□□□□□ -0.43
SCUBE1-206ENST00000477991 CHST13Q8NET6 341 aa12.37□□□□□ -0.43
SCUBE1-206ENST00000477991 BADQ92934 168 aa12.37□□□□□ -0.43
SCUBE1-206ENST00000477991 FERMT2Q96AC1 680 aa12.37□□□□□ -0.43
SCUBE1-206ENST00000477991 FBXO40Q9UH90 709 aa12.37□□□□□ -0.43
SCUBE1-206ENST00000477991 CNPY2Q9Y2B0 182 aa12.37□□□□□ -0.43
SCUBE1-206ENST00000477991 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.37□□□□□ -0.43
SCUBE1-206ENST00000477991 CDH23Q9H251 3354 aa12.36□□□□□ -0.43
SCUBE1-206ENST00000477991 KIAA0355O15063 1070 aa12.36□□□□□ -0.43
SCUBE1-206ENST00000477991 PLA2G6O60733 806 aa12.36□□□□□ -0.43
SCUBE1-206ENST00000477991 DUSP11O75319 330 aaKnown RBP12.36□□□□□ -0.43
SCUBE1-206ENST00000477991 BMP3P12645 472 aa12.36□□□□□ -0.43
SCUBE1-206ENST00000477991 MX1P20591 662 aa12.36□□□□□ -0.43
SCUBE1-206ENST00000477991 ITGB8P26012 769 aa12.36□□□□□ -0.43
SCUBE1-206ENST00000477991 CST5P28325 142 aaPredicted RBP12.36□□□□□ -0.43
SCUBE1-206ENST00000477991 NKX3-2P78367 333 aa12.36□□□□□ -0.43
SCUBE1-206ENST00000477991 SHHQ15465 462 aa12.36□□□□□ -0.43
SCUBE1-206ENST00000477991 SLFN13Q68D06 897 aa12.36□□□□□ -0.43
SCUBE1-206ENST00000477991 ANKRD33Q7Z3H0 272 aa12.36□□□□□ -0.43
SCUBE1-206ENST00000477991 KIFC2Q96AC6 838 aa12.36□□□□□ -0.43
SCUBE1-206ENST00000477991 DDX11Q96FC9 970 aa12.36□□□□□ -0.43
SCUBE1-206ENST00000477991 GMCL1Q96IK5 515 aa12.36□□□□□ -0.43
SCUBE1-206ENST00000477991 TOX2Q96NM4 488 aa12.36□□□□□ -0.43
SCUBE1-206ENST00000477991 GUCD1Q96NT3 240 aa12.36□□□□□ -0.43
SCUBE1-206ENST00000477991 FSD1Q9BTV5 496 aa12.36□□□□□ -0.43
SCUBE1-206ENST00000477991 NAPBQ9H115 298 aa12.36□□□□□ -0.43
SCUBE1-206ENST00000477991 RAVER2Q9HCJ3 691 aaKnown RBP12.36□□□□□ -0.43
SCUBE1-206ENST00000477991 FAM184BQ9ULE4 1060 aa12.36□□□□□ -0.43
SCUBE1-206ENST00000477991 TACC3Q9Y6A5 838 aa12.36□□□□□ -0.43
SCUBE1-206ENST00000477991 ZNF536O15090 1300 aa12.36□□□□□ -0.43
SCUBE1-206ENST00000477991 SYNRGQ9UMZ2 1314 aa12.36□□□□□ -0.43
SCUBE1-206ENST00000477991 MOXD2PA6NHM9 499 aa12.35□□□□□ -0.43
SCUBE1-206ENST00000477991 MYCNP04198 464 aaPredicted RBP12.35□□□□□ -0.43
SCUBE1-206ENST00000477991 SLC3A2P08195 630 aaKnown RBP12.35□□□□□ -0.43
SCUBE1-206ENST00000477991 CLTBP09497 229 aa12.35□□□□□ -0.43
SCUBE1-206ENST00000477991 FGRP09769 529 aa12.35□□□□□ -0.43
SCUBE1-206ENST00000477991 TSPY3P0CV98 308 aa12.35□□□□□ -0.43
SCUBE1-206ENST00000477991 TSPY8P0CW00 308 aa12.35□□□□□ -0.43
SCUBE1-206ENST00000477991 RRP1P56182 461 aaKnown RBP12.35□□□□□ -0.43
SCUBE1-206ENST00000477991 TFAP4Q01664 338 aa12.35□□□□□ -0.43
SCUBE1-206ENST00000477991 C9orf50Q5SZB4 431 aa12.35□□□□□ -0.43
SCUBE1-206ENST00000477991 CPXCR1Q8N123 301 aa12.35□□□□□ -0.43
SCUBE1-206ENST00000477991 LRRC47Q8N1G4 583 aaKnown RBP12.35□□□□□ -0.43
SCUBE1-206ENST00000477991 LENG1Q96BZ8 264 aaPredicted RBP12.35□□□□□ -0.43
SCUBE1-206ENST00000477991 KATNBL1Q9H079 304 aa12.35□□□□□ -0.43
SCUBE1-206ENST00000477991 ABHD16BQ9H3Z7 469 aa12.35□□□□□ -0.43
SCUBE1-206ENST00000477991 PRDM5Q9NQX1 630 aaPredicted RBP12.35□□□□□ -0.43
SCUBE1-206ENST00000477991 IL17RBQ9NRM6 502 aa12.35□□□□□ -0.43
SCUBE1-206ENST00000477991 ANAPC4Q9UJX5 808 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms