RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 ZNF697Q5TEC3 545 aa14.04□□□□□ -0.16
CPSF7-211ENST00000477890 CPXCR1Q8N123 301 aa14.04□□□□□ -0.16
CPSF7-211ENST00000477890 PRPF38AQ8NAV1 312 aaKnown RBP14.04□□□□□ -0.16
CPSF7-211ENST00000477890 TRIM43Q96BQ3 446 aaPredicted RBP14.04□□□□□ -0.16
CPSF7-211ENST00000477890 LENG1Q96BZ8 264 aaPredicted RBP14.04□□□□□ -0.16
CPSF7-211ENST00000477890 DDX11Q96FC9 970 aa14.04□□□□□ -0.16
CPSF7-211ENST00000477890 GUCD1Q96NT3 240 aa14.04□□□□□ -0.16
CPSF7-211ENST00000477890 DCTPP1Q9H773 170 aa14.04□□□□□ -0.16
CPSF7-211ENST00000477890 EPB41L4AQ9HCS5 686 aaPredicted RBP14.04□□□□□ -0.16
CPSF7-211ENST00000477890 RIPK3Q9Y572 518 aa14.04□□□□□ -0.16
CPSF7-211ENST00000477890 CTDP1Q9Y5B0 961 aaPredicted RBP14.04□□□□□ -0.16
CPSF7-211ENST00000477890 A0A1W2PQ45 241 aaPredicted RBP14.03□□□□□ -0.16
CPSF7-211ENST00000477890 A0A1W2PQY0 241 aa14.03□□□□□ -0.16
CPSF7-211ENST00000477890 M0R2C6 588 aa14.03□□□□□ -0.16
CPSF7-211ENST00000477890 PRDM1O75626 825 aa14.03□□□□□ -0.16
CPSF7-211ENST00000477890 ZFYP08048 801 aaPredicted RBP14.03□□□□□ -0.16
CPSF7-211ENST00000477890 GNAT2P19087 354 aa14.03□□□□□ -0.16
CPSF7-211ENST00000477890 ZNF444Q8N0Y2 327 aaPredicted RBP14.03□□□□□ -0.16
CPSF7-211ENST00000477890 ZNF287Q9HBT7 754 aa14.03□□□□□ -0.16
CPSF7-211ENST00000477890 TACC3Q9Y6A5 838 aa14.03□□□□□ -0.16
CPSF7-211ENST00000477890 IGKV6D-41A0A0C4DH26 115 aa14.02□□□□□ -0.17
CPSF7-211ENST00000477890 PQBP1O60828 265 aaKnown RBP14.02□□□□□ -0.17
CPSF7-211ENST00000477890 ZBED4O75132 1171 aa14.02□□□□□ -0.17
CPSF7-211ENST00000477890 CLTBP09497 229 aa14.02□□□□□ -0.17
CPSF7-211ENST00000477890 MSL3Q8N5Y2 521 aaKnown RBP14.02□□□□□ -0.17
CPSF7-211ENST00000477890 KIFC2Q96AC6 838 aa14.02□□□□□ -0.17
CPSF7-211ENST00000477890 CEP95Q96GE4 821 aa14.02□□□□□ -0.17
CPSF7-211ENST00000477890 RAVER2Q9HCJ3 691 aaKnown RBP14.02□□□□□ -0.17
CPSF7-211ENST00000477890 ZHX1Q9UKY1 873 aaPredicted RBP14.02□□□□□ -0.17
CPSF7-211ENST00000477890 MCM3APO60318 1980 aa14.02□□□□□ -0.17
CPSF7-211ENST00000477890 SYNGAP1Q96PV0 1343 aa14.01□□□□□ -0.17
CPSF7-211ENST00000477890 SYNRGQ9UMZ2 1314 aa14.01□□□□□ -0.17
CPSF7-211ENST00000477890 PATL2C9JE40 543 aaKnown RBP14.01□□□□□ -0.17
CPSF7-211ENST00000477890 ATP2A1O14983 1001 aa14.01□□□□□ -0.17
CPSF7-211ENST00000477890 ADAMTS4O75173 837 aa14.01□□□□□ -0.17
CPSF7-211ENST00000477890 SNAI1O95863 264 aaPredicted RBP14.01□□□□□ -0.17
CPSF7-211ENST00000477890 ITGB8P26012 769 aa14.01□□□□□ -0.17
CPSF7-211ENST00000477890 LRRFIP1Q32MZ4 808 aaKnown RBP14.01□□□□□ -0.17
CPSF7-211ENST00000477890 IFNL3Q8IZI9 196 aa14.01□□□□□ -0.17
CPSF7-211ENST00000477890 LRRC47Q8N1G4 583 aaKnown RBP14.01□□□□□ -0.17
CPSF7-211ENST00000477890 TSEN34Q9BSV6 310 aaKnown RBP14.01□□□□□ -0.17
CPSF7-211ENST00000477890 MTMR4Q9NYA4 1195 aa14.01□□□□□ -0.17
CPSF7-211ENST00000477890 FEM1BQ9UK73 627 aa14.01□□□□□ -0.17
CPSF7-211ENST00000477890 FAM184BQ9ULE4 1060 aa14.01□□□□□ -0.17
CPSF7-211ENST00000477890 DNAJC25-GNG10A0A024R161 153 aa14□□□□□ -0.17
CPSF7-211ENST00000477890 TTLL1O95922 423 aa14□□□□□ -0.17
CPSF7-211ENST00000477890 TSPY3P0CV98 308 aa14□□□□□ -0.17
CPSF7-211ENST00000477890 TSPY8P0CW00 308 aa14□□□□□ -0.17
CPSF7-211ENST00000477890 RAG1P15918 1043 aa14□□□□□ -0.17
CPSF7-211ENST00000477890 ACLYP53396 1101 aa14□□□□□ -0.17
CPSF7-211ENST00000477890 MAMDC4Q6UXC1 1216 aa14□□□□□ -0.17
CPSF7-211ENST00000477890 ANKRD35Q8N283 1001 aa14□□□□□ -0.17
CPSF7-211ENST00000477890 NUP133Q8WUM0 1156 aa14□□□□□ -0.17
CPSF7-211ENST00000477890 MKL1Q969V6 931 aa14□□□□□ -0.17
CPSF7-211ENST00000477890 SEC62Q99442 399 aaKnown RBP14□□□□□ -0.17
CPSF7-211ENST00000477890 SLC38A10Q9HBR0 1119 aa14□□□□□ -0.17
CPSF7-211ENST00000477890 STARD7Q9NQZ5 370 aa14□□□□□ -0.17
CPSF7-211ENST00000477890 TMEM39AQ9NV64 488 aa14□□□□□ -0.17
CPSF7-211ENST00000477890 ISY1Q9ULR0 285 aaKnown RBP14□□□□□ -0.17
CPSF7-211ENST00000477890 TTC41PQ6P2S7 1318 aa13.99□□□□□ -0.17
CPSF7-211ENST00000477890 KIAA0355O15063 1070 aa13.99□□□□□ -0.17
CPSF7-211ENST00000477890 ERC2O15083 957 aa13.99□□□□□ -0.17
CPSF7-211ENST00000477890 SMAD3P84022 425 aaKnown RBP13.99□□□□□ -0.17
CPSF7-211ENST00000477890 PDE4BQ07343 736 aa13.99□□□□□ -0.17
CPSF7-211ENST00000477890 ACVR2BQ13705 512 aa13.99□□□□□ -0.17
CPSF7-211ENST00000477890 KCNA10Q16322 511 aa13.99□□□□□ -0.17
CPSF7-211ENST00000477890 SLFN13Q68D06 897 aa13.99□□□□□ -0.17
CPSF7-211ENST00000477890 ZNF467Q7Z7K2 595 aaPredicted RBP13.99□□□□□ -0.17
CPSF7-211ENST00000477890 GMCL1P1Q8NEA9 526 aa13.99□□□□□ -0.17
CPSF7-211ENST00000477890 KLHDC9Q8NEP7 349 aa13.99□□□□□ -0.17
CPSF7-211ENST00000477890 NEDD1Q8NHV4 660 aa13.99□□□□□ -0.17
CPSF7-211ENST00000477890 RNPC3Q96LT9 517 aaKnown RBP13.99□□□□□ -0.17
CPSF7-211ENST00000477890 CDX2Q99626 313 aaPredicted RBP13.99□□□□□ -0.17
CPSF7-211ENST00000477890 FSD1Q9BTV5 496 aa13.99□□□□□ -0.17
CPSF7-211ENST00000477890 NACAP1Q9BZK3 213 aa13.99□□□□□ -0.17
CPSF7-211ENST00000477890 SEMA6BQ9H3T3 888 aa13.99□□□□□ -0.17
CPSF7-211ENST00000477890 HOMER2Q9NSB8 354 aa13.99□□□□□ -0.17
CPSF7-211ENST00000477890 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.99□□□□□ -0.17
CPSF7-211ENST00000477890 FBXO40Q9UH90 709 aa13.99□□□□□ -0.17
CPSF7-211ENST00000477890 SYNPO2Q9UMS6 1093 aa13.99□□□□□ -0.17
CPSF7-211ENST00000477890 MYADML2A6NDP7 307 aa13.98□□□□□ -0.17
CPSF7-211ENST00000477890 MOXD2PA6NHM9 499 aa13.98□□□□□ -0.17
CPSF7-211ENST00000477890 DCDC2CA8MYV0 355 aa13.98□□□□□ -0.17
CPSF7-211ENST00000477890 DUSP11O75319 330 aaKnown RBP13.98□□□□□ -0.17
CPSF7-211ENST00000477890 SLC3A2P08195 630 aaKnown RBP13.98□□□□□ -0.17
CPSF7-211ENST00000477890 C6orf222P0C671 652 aaPredicted RBP13.98□□□□□ -0.17
CPSF7-211ENST00000477890 BMP3P12645 472 aa13.98□□□□□ -0.17
CPSF7-211ENST00000477890 OAZ1P54368 228 aa13.98□□□□□ -0.17
CPSF7-211ENST00000477890 EPHB4P54760 987 aa13.98□□□□□ -0.17
CPSF7-211ENST00000477890 FPGSQ05932 587 aa13.98□□□□□ -0.17
CPSF7-211ENST00000477890 PPARAQ07869 468 aa13.98□□□□□ -0.17
CPSF7-211ENST00000477890 FAAP100Q0VG06 881 aa13.98□□□□□ -0.17
CPSF7-211ENST00000477890 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.98□□□□□ -0.17
CPSF7-211ENST00000477890 ANKRD33Q7Z3H0 272 aa13.98□□□□□ -0.17
CPSF7-211ENST00000477890 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.98□□□□□ -0.17
CPSF7-211ENST00000477890 CHST13Q8NET6 341 aa13.98□□□□□ -0.17
CPSF7-211ENST00000477890 TOX2Q96NM4 488 aa13.98□□□□□ -0.17
CPSF7-211ENST00000477890 NAPBQ9H115 298 aa13.98□□□□□ -0.17
CPSF7-211ENST00000477890 ABHD16BQ9H3Z7 469 aa13.98□□□□□ -0.17
CPSF7-211ENST00000477890 LAMA2P24043 3122 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms