RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 NCAPHQ15003 741 aa7.06□□□□□ -1.28
SMNDC1-205ENST00000477763 VHLLQ6RSH7 139 aa7.06□□□□□ -1.28
SMNDC1-205ENST00000477763 USHBP1Q8N6Y0 703 aa7.06□□□□□ -1.28
SMNDC1-205ENST00000477763 DNAJC2Q99543 621 aaKnown RBP7.06□□□□□ -1.28
SMNDC1-205ENST00000477763 KLHL25Q9H0H3 589 aa7.06□□□□□ -1.28
SMNDC1-205ENST00000477763 SLAMF8Q9P0V8 285 aa7.06□□□□□ -1.28
SMNDC1-205ENST00000477763 TMEM59LQ9UK28 342 aa7.06□□□□□ -1.28
SMNDC1-205ENST00000477763 RNF114Q9Y508 228 aa7.06□□□□□ -1.28
SMNDC1-205ENST00000477763 GSNP06396 782 aa7.05□□□□□ -1.28
SMNDC1-205ENST00000477763 ITGA4P13612 1032 aa7.05□□□□□ -1.28
SMNDC1-205ENST00000477763 ENDOUP21128 410 aaKnown RBP7.05□□□□□ -1.28
SMNDC1-205ENST00000477763 BMP8BP34820 402 aa7.05□□□□□ -1.28
SMNDC1-205ENST00000477763 ZNF143P52747 638 aaPredicted RBP7.05□□□□□ -1.28
SMNDC1-205ENST00000477763 ZNF445P59923 1031 aa7.05□□□□□ -1.28
SMNDC1-205ENST00000477763 HEATR6Q6AI08 1181 aaKnown RBP7.05□□□□□ -1.28
SMNDC1-205ENST00000477763 SYTL4Q96C24 671 aaPredicted RBP7.05□□□□□ -1.28
SMNDC1-205ENST00000477763 GBP3Q9H0R5 595 aa7.05□□□□□ -1.28
SMNDC1-205ENST00000477763 WHRNQ9P202 907 aa7.05□□□□□ -1.28
SMNDC1-205ENST00000477763 PCDHB10Q9UN67 800 aa7.05□□□□□ -1.28
SMNDC1-205ENST00000477763 CTNND2Q9UQB3 1225 aa7.05□□□□□ -1.28
SMNDC1-205ENST00000477763 ZNF451Q9Y4E5 1061 aa7.05□□□□□ -1.28
SMNDC1-205ENST00000477763 NOL9Q5SY16 702 aaKnown RBP7.04□□□□□ -1.28
SMNDC1-205ENST00000477763 NBPF6Q5VWK0 638 aa7.04□□□□□ -1.28
SMNDC1-205ENST00000477763 KIAA1211LQ6NV74 962 aa7.04□□□□□ -1.28
SMNDC1-205ENST00000477763 NBPF4Q96M43 638 aa7.04□□□□□ -1.28
SMNDC1-205ENST00000477763 DSCC1Q9BVC3 393 aa7.04□□□□□ -1.28
SMNDC1-205ENST00000477763 FAM86C1Q9NVL1 165 aa7.04□□□□□ -1.28
SMNDC1-205ENST00000477763 C19orf73Q9NVV2 129 aa7.04□□□□□ -1.28
SMNDC1-205ENST00000477763 TCFL5Q9UL49 500 aa7.04□□□□□ -1.28
SMNDC1-205ENST00000477763 DNAJC25-GNG10A0A024R161 153 aa7.03□□□□□ -1.28
SMNDC1-205ENST00000477763 SSU72P8A0A1W2PR75 194 aa7.03□□□□□ -1.28
SMNDC1-205ENST00000477763 ANKRD34BA5PLL1 514 aa7.03□□□□□ -1.28
SMNDC1-205ENST00000477763 NAT2P11245 290 aa7.03□□□□□ -1.28
SMNDC1-205ENST00000477763 CTSKP43235 329 aa7.03□□□□□ -1.28
SMNDC1-205ENST00000477763 DUSP4Q13115 394 aa7.03□□□□□ -1.28
SMNDC1-205ENST00000477763 FXNQ16595 210 aa7.03□□□□□ -1.28
SMNDC1-205ENST00000477763 RALGPS1Q5JS13 557 aa7.03□□□□□ -1.28
SMNDC1-205ENST00000477763 ANKS3Q6ZW76 656 aa7.03□□□□□ -1.28
SMNDC1-205ENST00000477763 TRIM55Q9BYV6 548 aa7.03□□□□□ -1.28
SMNDC1-205ENST00000477763 FOXP3Q9BZS1 431 aa7.03□□□□□ -1.28
SMNDC1-205ENST00000477763 DIS3Q9Y2L1 958 aaKnown RBP7.03□□□□□ -1.28
SMNDC1-205ENST00000477763 SF3B6Q9Y3B4 125 aaKnown RBP7.03□□□□□ -1.28
SMNDC1-205ENST00000477763 U2SURPO15042 1029 aaKnown RBP7.02□□□□□ -1.29
SMNDC1-205ENST00000477763 PPM1BO75688 479 aa7.02□□□□□ -1.29
SMNDC1-205ENST00000477763 ZNF205O95201 554 aa7.02□□□□□ -1.29
SMNDC1-205ENST00000477763 EPHX1P07099 455 aa7.02□□□□□ -1.29
SMNDC1-205ENST00000477763 SYPP08247 313 aa7.02□□□□□ -1.29
SMNDC1-205ENST00000477763 ZGLP1P0C6A0 271 aa7.02□□□□□ -1.29
SMNDC1-205ENST00000477763 AFMP43652 599 aa7.02□□□□□ -1.29
SMNDC1-205ENST00000477763 CWF19L1Q69YN2 538 aaKnown RBP7.02□□□□□ -1.29
SMNDC1-205ENST00000477763 FIBCD1Q8N539 461 aa7.02□□□□□ -1.29
SMNDC1-205ENST00000477763 PDZD8Q8NEN9 1154 aa7.02□□□□□ -1.29
SMNDC1-205ENST00000477763 PMFBP1Q8TBY8 1022 aa7.02□□□□□ -1.29
SMNDC1-205ENST00000477763 RCC1LQ96I51 464 aaKnown RBP7.02□□□□□ -1.29
SMNDC1-205ENST00000477763 ADAMTS10Q9H324 1103 aa7.02□□□□□ -1.29
SMNDC1-205ENST00000477763 SUSD2Q9UGT4 822 aa7.02□□□□□ -1.29
SMNDC1-205ENST00000477763 MINPP1Q9UNW1 487 aa7.02□□□□□ -1.29
SMNDC1-205ENST00000477763 TMEM82A0PJX8 343 aa7.01□□□□□ -1.29
SMNDC1-205ENST00000477763 KLF4O43474 513 aa7.01□□□□□ -1.29
SMNDC1-205ENST00000477763 PAPLNO95428 1278 aa7.01□□□□□ -1.29
SMNDC1-205ENST00000477763 HPXP02790 462 aa7.01□□□□□ -1.29
SMNDC1-205ENST00000477763 VAV1P15498 845 aa7.01□□□□□ -1.29
SMNDC1-205ENST00000477763 YBX3P16989 372 aaKnown RBP eCLIP7.01□□□□□ -1.29
SMNDC1-205ENST00000477763 LARP1BQ659C4 914 aaKnown RBP7.01□□□□□ -1.29
SMNDC1-205ENST00000477763 CRTC3Q6UUV7 619 aa7.01□□□□□ -1.29
SMNDC1-205ENST00000477763 FAM178BQ8IXR5 827 aa7.01□□□□□ -1.29
SMNDC1-205ENST00000477763 LINC01599Q8WXQ3 324 aa7.01□□□□□ -1.29
SMNDC1-205ENST00000477763 BRF1Q92994 677 aa7.01□□□□□ -1.29
SMNDC1-205ENST00000477763 MEIS1O00470 390 aa7□□□□□ -1.29
SMNDC1-205ENST00000477763 RAC2P15153 192 aa7□□□□□ -1.29
SMNDC1-205ENST00000477763 CHRNEQ04844 493 aa7□□□□□ -1.29
SMNDC1-205ENST00000477763 NR0B2Q15466 257 aa7□□□□□ -1.29
SMNDC1-205ENST00000477763 C6orf15Q6UXA7 325 aaPredicted RBP7□□□□□ -1.29
SMNDC1-205ENST00000477763 DPH6Q7L8W6 267 aa7□□□□□ -1.29
SMNDC1-205ENST00000477763 ARHGEF39Q8N4T4 335 aa7□□□□□ -1.29
SMNDC1-205ENST00000477763 OXR1Q8N573 874 aa7□□□□□ -1.29
SMNDC1-205ENST00000477763 ANKS4BQ8N8V4 417 aa7□□□□□ -1.29
SMNDC1-205ENST00000477763 G6PC3Q9BUM1 346 aa7□□□□□ -1.29
SMNDC1-205ENST00000477763 FITM1A5D6W6 292 aa6.99□□□□□ -1.29
SMNDC1-205ENST00000477763 H0Y8X5 98 aa6.99□□□□□ -1.29
SMNDC1-205ENST00000477763 RPL10P27635 214 aaKnown RBP6.99□□□□□ -1.29
SMNDC1-205ENST00000477763 KIR2DL1P43626 348 aaPredicted RBP6.99□□□□□ -1.29
SMNDC1-205ENST00000477763 KIR2DL2P43627 348 aaPredicted RBP6.99□□□□□ -1.29
SMNDC1-205ENST00000477763 NOP2P46087 812 aaKnown RBP6.99□□□□□ -1.29
SMNDC1-205ENST00000477763 HK2P52789 917 aa6.99□□□□□ -1.29
SMNDC1-205ENST00000477763 POU4F1Q01851 419 aa6.99□□□□□ -1.29
SMNDC1-205ENST00000477763 GRB10Q13322 594 aa6.99□□□□□ -1.29
SMNDC1-205ENST00000477763 RAB33AQ14088 237 aa6.99□□□□□ -1.29
SMNDC1-205ENST00000477763 WAPLQ7Z5K2 1190 aa6.99□□□□□ -1.29
SMNDC1-205ENST00000477763 ADAT2Q7Z6V5 191 aaKnown RBP6.99□□□□□ -1.29
SMNDC1-205ENST00000477763 SPPL2CQ8IUH8 684 aa6.99□□□□□ -1.29
SMNDC1-205ENST00000477763 ZNF513Q8N8E2 541 aaPredicted RBP6.99□□□□□ -1.29
SMNDC1-205ENST00000477763 HNRNPLLQ8WVV9 542 aaKnown RBP6.99□□□□□ -1.29
SMNDC1-205ENST00000477763 ASIC4Q96FT7 647 aa6.99□□□□□ -1.29
SMNDC1-205ENST00000477763 FCRL2Q96LA5 508 aaPredicted RBP6.99□□□□□ -1.29
SMNDC1-205ENST00000477763 APBA2Q99767 749 aa6.99□□□□□ -1.29
SMNDC1-205ENST00000477763 LNPKQ9C0E8 428 aa6.99□□□□□ -1.29
SMNDC1-205ENST00000477763 NOL6Q9H6R4 1146 aaKnown RBP6.99□□□□□ -1.29
SMNDC1-205ENST00000477763 SIRPGQ9P1W8 387 aa6.99□□□□□ -1.29
SMNDC1-205ENST00000477763 DDAH1O94760 285 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms