RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 DCAF15Q66K64 600 aa7.7□□□□□ -1.18
VPS50-213ENST00000477572 ATG14Q6ZNE5 492 aa7.7□□□□□ -1.18
VPS50-213ENST00000477572 PPFIBP1Q86W92 1011 aa7.7□□□□□ -1.18
VPS50-213ENST00000477572 ZNF654Q8IZM8 581 aa7.7□□□□□ -1.18
VPS50-213ENST00000477572 KCNN1Q92952 543 aa7.7□□□□□ -1.18
VPS50-213ENST00000477572 MRRFQ96E11 262 aaKnown RBP7.7□□□□□ -1.18
VPS50-213ENST00000477572 DHRS1Q96LJ7 313 aa7.7□□□□□ -1.18
VPS50-213ENST00000477572 CDADC1Q9BWV3 514 aa7.7□□□□□ -1.18
VPS50-213ENST00000477572 SLC6A17Q9H1V8 727 aa7.7□□□□□ -1.18
VPS50-213ENST00000477572 EFR3BQ9Y2G0 817 aa7.7□□□□□ -1.18
VPS50-213ENST00000477572 NPIPB6E9PJ23 425 aa7.69□□□□□ -1.18
VPS50-213ENST00000477572 INTS3Q68E01 1043 aaKnown RBP7.69□□□□□ -1.18
VPS50-213ENST00000477572 UNC5AQ6ZN44 842 aa7.69□□□□□ -1.18
VPS50-213ENST00000477572 ANKLE2Q86XL3 938 aa7.69□□□□□ -1.18
VPS50-213ENST00000477572 NT5DC4Q86YG4 428 aa7.69□□□□□ -1.18
VPS50-213ENST00000477572 CILP2Q8IUL8 1156 aa7.69□□□□□ -1.18
VPS50-213ENST00000477572 C7orf61Q8IZ16 206 aa7.69□□□□□ -1.18
VPS50-213ENST00000477572 BRF1Q92994 677 aa7.69□□□□□ -1.18
VPS50-213ENST00000477572 DSCC1Q9BVC3 393 aa7.69□□□□□ -1.18
VPS50-213ENST00000477572 CWC22Q9HCG8 908 aaKnown RBP7.69□□□□□ -1.18
VPS50-213ENST00000477572 UNCXA6NJT0 531 aa7.68□□□□□ -1.18
VPS50-213ENST00000477572 SHOXO15266 292 aa7.68□□□□□ -1.18
VPS50-213ENST00000477572 CFPP27918 469 aa7.68□□□□□ -1.18
VPS50-213ENST00000477572 PMS1P54277 932 aaKnown RBP7.68□□□□□ -1.18
VPS50-213ENST00000477572 HDLBPQ00341 1268 aaKnown RBP7.68□□□□□ -1.18
VPS50-213ENST00000477572 AXDND1Q5T1B0 1012 aaPredicted RBP7.68□□□□□ -1.18
VPS50-213ENST00000477572 ADGRF1Q5T601 910 aa7.68□□□□□ -1.18
VPS50-213ENST00000477572 LSRQ86X29 649 aaPredicted RBP7.68□□□□□ -1.18
VPS50-213ENST00000477572 BHLHE22Q8NFJ8 381 aaPredicted RBP7.68□□□□□ -1.18
VPS50-213ENST00000477572 TM9SF2Q99805 663 aa7.68□□□□□ -1.18
VPS50-213ENST00000477572 PLCD4Q9BRC7 762 aa7.68□□□□□ -1.18
VPS50-213ENST00000477572 AP5S1Q9NUS5 200 aa7.68□□□□□ -1.18
VPS50-213ENST00000477572 KIAA1522Q9P206 1035 aaPredicted RBP7.68□□□□□ -1.18
VPS50-213ENST00000477572 MYOCOSA0A1B0GUC4 107 aa7.67□□□□□ -1.18
VPS50-213ENST00000477572 VAMP1P23763 118 aa7.67□□□□□ -1.18
VPS50-213ENST00000477572 GUCY2CP25092 1073 aa7.67□□□□□ -1.18
VPS50-213ENST00000477572 RTP1P59025 263 aa7.67□□□□□ -1.18
VPS50-213ENST00000477572 SNX17Q15036 470 aa7.67□□□□□ -1.18
VPS50-213ENST00000477572 NLRX1Q86UT6 975 aa7.67□□□□□ -1.18
VPS50-213ENST00000477572 LRRC56Q8IYG6 542 aaPredicted RBP7.67□□□□□ -1.18
VPS50-213ENST00000477572 CRBNQ96SW2 442 aa7.67□□□□□ -1.18
VPS50-213ENST00000477572 SGPP1Q9BX95 441 aa7.67□□□□□ -1.18
VPS50-213ENST00000477572 MCOLN1Q9GZU1 580 aa7.67□□□□□ -1.18
VPS50-213ENST00000477572 VAV1P15498 845 aa7.66□□□□□ -1.18
VPS50-213ENST00000477572 NOL9Q5SY16 702 aaKnown RBP7.66□□□□□ -1.18
VPS50-213ENST00000477572 TMEM132EQ6IEE7 984 aa7.66□□□□□ -1.18
VPS50-213ENST00000477572 IRF2BP1Q8IU81 584 aa7.66□□□□□ -1.18
VPS50-213ENST00000477572 TOX2Q96NM4 488 aa7.66□□□□□ -1.18
VPS50-213ENST00000477572 SLC26A8Q96RN1 970 aa7.66□□□□□ -1.18
VPS50-213ENST00000477572 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.66□□□□□ -1.18
VPS50-213ENST00000477572 GPR55Q9Y2T6 319 aaPredicted RBP7.66□□□□□ -1.18
VPS50-213ENST00000477572 KRTAP4-8A0A0G2JLE6 195 aa7.65□□□□□ -1.18
VPS50-213ENST00000477572 TCAF2A6NFQ2 919 aa7.65□□□□□ -1.18
VPS50-213ENST00000477572 H0Y8X5 98 aa7.65□□□□□ -1.18
VPS50-213ENST00000477572 NRDCO43847 1150 aa7.65□□□□□ -1.18
VPS50-213ENST00000477572 ZNF205O95201 554 aa7.65□□□□□ -1.18
VPS50-213ENST00000477572 BMP8BP34820 402 aa7.65□□□□□ -1.18
VPS50-213ENST00000477572 KIR2DL1P43626 348 aaPredicted RBP7.65□□□□□ -1.18
VPS50-213ENST00000477572 KIR2DL2P43627 348 aaPredicted RBP7.65□□□□□ -1.18
VPS50-213ENST00000477572 ZNF445P59923 1031 aa7.65□□□□□ -1.18
VPS50-213ENST00000477572 GPRASP2Q96D09 838 aa7.65□□□□□ -1.18
VPS50-213ENST00000477572 FCRL2Q96LA5 508 aaPredicted RBP7.65□□□□□ -1.18
VPS50-213ENST00000477572 GP6Q9HCN6 339 aa7.65□□□□□ -1.18
VPS50-213ENST00000477572 LTBP3Q9NS15 1303 aa7.65□□□□□ -1.18
VPS50-213ENST00000477572 ERVK13-1Q9NX77 482 aa7.65□□□□□ -1.18
VPS50-213ENST00000477572 PCDHB10Q9UN67 800 aa7.65□□□□□ -1.18
VPS50-213ENST00000477572 SMG5Q9UPR3 1016 aaKnown RBP7.65□□□□□ -1.18
VPS50-213ENST00000477572 FADS2P1A8MWK0 482 aa7.64□□□□□ -1.19
VPS50-213ENST00000477572 GSTM1P09488 218 aa7.64□□□□□ -1.19
VPS50-213ENST00000477572 KCNA10Q16322 511 aa7.64□□□□□ -1.19
VPS50-213ENST00000477572 SPOCD1Q6ZMY3 1216 aa7.64□□□□□ -1.19
VPS50-213ENST00000477572 C1QL4Q86Z23 238 aa7.64□□□□□ -1.19
VPS50-213ENST00000477572 TAB3Q8N5C8 712 aaPredicted RBP7.64□□□□□ -1.19
VPS50-213ENST00000477572 RBBP8NLQ8NC74 664 aaPredicted RBP7.64□□□□□ -1.19
VPS50-213ENST00000477572 ZNF552Q9H707 407 aaPredicted RBP7.64□□□□□ -1.19
VPS50-213ENST00000477572 CD320Q9NPF0 282 aa7.64□□□□□ -1.19
VPS50-213ENST00000477572 ZNF451Q9Y4E5 1061 aa7.64□□□□□ -1.19
VPS50-213ENST00000477572 OR14I1A6ND48 311 aa7.63□□□□□ -1.19
VPS50-213ENST00000477572 NASPP49321 788 aaPredicted RBP7.63□□□□□ -1.19
VPS50-213ENST00000477572 EIF6P56537 245 aaKnown RBP7.63□□□□□ -1.19
VPS50-213ENST00000477572 DLG4P78352 724 aa7.63□□□□□ -1.19
VPS50-213ENST00000477572 HSF5Q4G112 596 aaPredicted RBP7.63□□□□□ -1.19
VPS50-213ENST00000477572 RTP2Q5QGT7 225 aa7.63□□□□□ -1.19
VPS50-213ENST00000477572 CWF19L1Q69YN2 538 aaKnown RBP7.63□□□□□ -1.19
VPS50-213ENST00000477572 LCNL1Q6ZST4 164 aa7.63□□□□□ -1.19
VPS50-213ENST00000477572 TNFRSF10DQ9UBN6 386 aa7.63□□□□□ -1.19
VPS50-213ENST00000477572 ZNF214Q9UL59 606 aaPredicted RBP7.63□□□□□ -1.19
VPS50-213ENST00000477572 TAF6LQ9Y6J9 622 aa7.63□□□□□ -1.19
VPS50-213ENST00000477572 GSNP06396 782 aa7.62□□□□□ -1.19
VPS50-213ENST00000477572 CD247P20963 164 aa7.62□□□□□ -1.19
VPS50-213ENST00000477572 GLDCP23378 1020 aa7.62□□□□□ -1.19
VPS50-213ENST00000477572 SOX9P48436 509 aa7.62□□□□□ -1.19
VPS50-213ENST00000477572 CEBPAP49715 358 aaPredicted RBP7.62□□□□□ -1.19
VPS50-213ENST00000477572 PPP2R5EQ16537 467 aa7.62□□□□□ -1.19
VPS50-213ENST00000477572 FIBCD1Q8N539 461 aa7.62□□□□□ -1.19
VPS50-213ENST00000477572 TMEM52Q8NDY8 209 aa7.62□□□□□ -1.19
VPS50-213ENST00000477572 ADCY4Q8NFM4 1077 aa7.62□□□□□ -1.19
VPS50-213ENST00000477572 ZDHHC15Q96MV8 337 aa7.62□□□□□ -1.19
VPS50-213ENST00000477572 SLC12A9Q9BXP2 914 aa7.62□□□□□ -1.19
VPS50-213ENST00000477572 NOL6Q9H6R4 1146 aaKnown RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms