RNA–Protein interactions for RNA: ENST00000477392.1

LINC00996-201, long intergenic non-protein coding RNA 996, humanhuman

TSL 1 (best) BASIC

Gene LINC00996, Length 2,043 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00996-201ENST00000477392 ALDH1B1P30837 517 aa17.81■□□□□ 0.44
LINC00996-201ENST00000477392 PDE6BP35913 854 aa17.81■□□□□ 0.44
LINC00996-201ENST00000477392 IQUBQ8NA54 791 aa17.81■□□□□ 0.44
LINC00996-201ENST00000477392 TMEM60Q9H2L4 133 aa17.81■□□□□ 0.44
LINC00996-201ENST00000477392 C10orf71Q711Q0 1435 aa17.8■□□□□ 0.44
LINC00996-201ENST00000477392 USP17L5A8MUK1 530 aa17.8■□□□□ 0.44
LINC00996-201ENST00000477392 AKR1B1P15121 316 aa17.8■□□□□ 0.44
LINC00996-201ENST00000477392 SMARCA1P28370 1054 aa17.8■□□□□ 0.44
LINC00996-201ENST00000477392 PTPN21Q16825 1174 aa17.8■□□□□ 0.44
LINC00996-201ENST00000477392 CT47A1Q5JQC4 288 aaPredicted RBP17.8■□□□□ 0.44
LINC00996-201ENST00000477392 STAMQ92783 540 aa17.8■□□□□ 0.44
LINC00996-201ENST00000477392 MASTLQ96GX5 879 aa17.8■□□□□ 0.44
LINC00996-201ENST00000477392 SAMSN1Q9NSI8 373 aaKnown RBP17.8■□□□□ 0.44
LINC00996-201ENST00000477392 MTMR4Q9NYA4 1195 aa17.8■□□□□ 0.44
LINC00996-201ENST00000477392 SCN9AQ15858 1988 aa17.8■□□□□ 0.44
LINC00996-201ENST00000477392 PDHBP11177 359 aa17.79■□□□□ 0.44
LINC00996-201ENST00000477392 KCNJ6P48051 423 aa17.79■□□□□ 0.44
LINC00996-201ENST00000477392 SCNN1DP51172 638 aa17.79■□□□□ 0.44
LINC00996-201ENST00000477392 NAPAP54920 295 aa17.79■□□□□ 0.44
LINC00996-201ENST00000477392 RBM10P98175 930 aaKnown RBP17.79■□□□□ 0.44
LINC00996-201ENST00000477392 E4F1Q66K89 784 aaPredicted RBP17.79■□□□□ 0.44
LINC00996-201ENST00000477392 TSC1Q92574 1164 aa17.79■□□□□ 0.44
LINC00996-201ENST00000477392 PYM1Q9BRP8 204 aaKnown RBP17.79■□□□□ 0.44
LINC00996-201ENST00000477392 PARP3Q9Y6F1 533 aa17.79■□□□□ 0.44
LINC00996-201ENST00000477392 SYNRGQ9UMZ2 1314 aa17.79■□□□□ 0.44
LINC00996-201ENST00000477392 PPP1R3GB7ZBB8 358 aa17.79■□□□□ 0.44
LINC00996-201ENST00000477392 HOMER1Q86YM7 354 aa17.79■□□□□ 0.44
LINC00996-201ENST00000477392 RRP36Q96EU6 259 aaKnown RBP17.79■□□□□ 0.44
LINC00996-201ENST00000477392 PIGSQ96S52 555 aa17.79■□□□□ 0.44
LINC00996-201ENST00000477392 USP40Q9NVE5 1235 aa17.79■□□□□ 0.44
LINC00996-201ENST00000477392 MYH4Q9Y623 1939 aa17.79■□□□□ 0.44
LINC00996-201ENST00000477392 GTPBP6O43824 516 aaPredicted RBP17.78■□□□□ 0.44
LINC00996-201ENST00000477392 CDC25AP30304 524 aa17.78■□□□□ 0.44
LINC00996-201ENST00000477392 MSL1Q68DK7 614 aa17.78■□□□□ 0.44
LINC00996-201ENST00000477392 CDC42EP5Q6NZY7 148 aa17.78■□□□□ 0.44
LINC00996-201ENST00000477392 CLEC10AQ8IUN9 316 aa17.78■□□□□ 0.44
LINC00996-201ENST00000477392 SMYD4Q8IYR2 804 aaPredicted RBP17.78■□□□□ 0.44
LINC00996-201ENST00000477392 FLAD1Q8NFF5 587 aa17.78■□□□□ 0.44
LINC00996-201ENST00000477392 BLZF1Q9H2G9 400 aa17.78■□□□□ 0.44
LINC00996-201ENST00000477392 RIOX1Q9H6W3 641 aa17.78■□□□□ 0.44
LINC00996-201ENST00000477392 TRMT1Q9NXH9 659 aaKnown RBP17.78■□□□□ 0.44
LINC00996-201ENST00000477392 SLX4Q8IY92 1834 aa17.78■□□□□ 0.44
LINC00996-201ENST00000477392 MYO3BQ8WXR4 1341 aa17.78■□□□□ 0.44
LINC00996-201ENST00000477392 TBX2Q13207 712 aaPredicted RBP17.77■□□□□ 0.44
LINC00996-201ENST00000477392 APOBEC3HQ6NTF7 200 aaKnown RBP17.77■□□□□ 0.44
LINC00996-201ENST00000477392 HHIPL2Q6UWX4 724 aa17.77■□□□□ 0.44
LINC00996-201ENST00000477392 LRRC47Q8N1G4 583 aaKnown RBP17.77■□□□□ 0.44
LINC00996-201ENST00000477392 CCDC12Q8WUD4 166 aaPredicted RBP17.77■□□□□ 0.44
LINC00996-201ENST00000477392 UBA5Q9GZZ9 404 aa17.77■□□□□ 0.44
LINC00996-201ENST00000477392 RGPD3A6NKT7 1758 aaPredicted RBP17.77■□□□□ 0.44
LINC00996-201ENST00000477392 RGPD4Q7Z3J3 1758 aa17.77■□□□□ 0.44
LINC00996-201ENST00000477392 FRMPD2Q68DX3 1309 aaPredicted RBP17.77■□□□□ 0.44
LINC00996-201ENST00000477392 SNHG28P0DPA3 235 aa17.77■□□□□ 0.43
LINC00996-201ENST00000477392 SHMT1P34896 483 aa17.77■□□□□ 0.43
LINC00996-201ENST00000477392 KARSQ15046 597 aaKnown RBP17.77■□□□□ 0.43
LINC00996-201ENST00000477392 SPATA1Q5VX52 437 aa17.77■□□□□ 0.43
LINC00996-201ENST00000477392 CEP135Q66GS9 1140 aa17.77■□□□□ 0.43
LINC00996-201ENST00000477392 KLHL10Q6JEL2 608 aa17.77■□□□□ 0.43
LINC00996-201ENST00000477392 APTXQ7Z2E3 356 aaKnown RBP17.77■□□□□ 0.43
LINC00996-201ENST00000477392 KRT25Q7Z3Z0 450 aa17.77■□□□□ 0.43
LINC00996-201ENST00000477392 TMX1Q9H3N1 280 aa17.77■□□□□ 0.43
LINC00996-201ENST00000477392 SEC63Q9UGP8 760 aaKnown RBP17.77■□□□□ 0.43
LINC00996-201ENST00000477392 SMCO2A6NFE2 343 aa17.76■□□□□ 0.43
LINC00996-201ENST00000477392 PP2D1A8MPX8 630 aa17.76■□□□□ 0.43
LINC00996-201ENST00000477392 RRP9O43818 475 aaKnown RBP17.76■□□□□ 0.43
LINC00996-201ENST00000477392 CDK11BP21127 795 aaKnown RBP17.76■□□□□ 0.43
LINC00996-201ENST00000477392 GOLGA8FQ08AF8 430 aa17.76■□□□□ 0.43
LINC00996-201ENST00000477392 GOLGA8DPQ0D2H9 430 aa17.76■□□□□ 0.43
LINC00996-201ENST00000477392 NAALADL2Q58DX5 795 aa17.76■□□□□ 0.43
LINC00996-201ENST00000477392 DTHD1Q6ZMT9 781 aa17.76■□□□□ 0.43
LINC00996-201ENST00000477392 VAT1LQ9HCJ6 419 aa17.76■□□□□ 0.43
LINC00996-201ENST00000477392 C6orf50Q9HD87 102 aa17.76■□□□□ 0.43
LINC00996-201ENST00000477392 KCNQ5Q9NR82 932 aa17.76■□□□□ 0.43
LINC00996-201ENST00000477392 DISC1Q9NRI5 854 aa17.76■□□□□ 0.43
LINC00996-201ENST00000477392 SWAP70Q9UH65 585 aa17.76■□□□□ 0.43
LINC00996-201ENST00000477392 SERPINB13Q9UIV8 391 aa17.76■□□□□ 0.43
LINC00996-201ENST00000477392 ESYT2A0FGR8 921 aa17.76■□□□□ 0.43
LINC00996-201ENST00000477392 LAD1O00515 517 aa17.76■□□□□ 0.43
LINC00996-201ENST00000477392 TXLNAP40222 546 aa17.76■□□□□ 0.43
LINC00996-201ENST00000477392 PRPHP41219 470 aa17.76■□□□□ 0.43
LINC00996-201ENST00000477392 STX17P56962 302 aa17.76■□□□□ 0.43
LINC00996-201ENST00000477392 NONOQ15233 471 aaKnown RBP eCLIP17.76■□□□□ 0.43
LINC00996-201ENST00000477392 PTPN14Q15678 1187 aa17.76■□□□□ 0.43
LINC00996-201ENST00000477392 ASPRV1Q53RT3 343 aa17.76■□□□□ 0.43
LINC00996-201ENST00000477392 CDKAL1Q5VV42 579 aa17.76■□□□□ 0.43
LINC00996-201ENST00000477392 TEKT1Q969V4 418 aa17.76■□□□□ 0.43
LINC00996-201ENST00000477392 PPP1R13BQ96KQ4 1090 aa17.76■□□□□ 0.43
LINC00996-201ENST00000477392 DBNDD1Q9H9R9 158 aa17.76■□□□□ 0.43
LINC00996-201ENST00000477392 A0A1B0GTH6 734 aa17.75■□□□□ 0.43
LINC00996-201ENST00000477392 PSDA5PKW4 1024 aaPredicted RBP17.75■□□□□ 0.43
LINC00996-201ENST00000477392 STAT6P42226 847 aa17.75■□□□□ 0.43
LINC00996-201ENST00000477392 EIF6P56537 245 aaKnown RBP17.75■□□□□ 0.43
LINC00996-201ENST00000477392 NFIAQ12857 509 aa17.75■□□□□ 0.43
LINC00996-201ENST00000477392 TMEM139Q8IV31 216 aa17.75■□□□□ 0.43
LINC00996-201ENST00000477392 CCDC112Q8NEF3 446 aa17.75■□□□□ 0.43
LINC00996-201ENST00000477392 ZNF622Q969S3 477 aaKnown RBP eCLIP17.75■□□□□ 0.43
LINC00996-201ENST00000477392 PAXBP1Q9Y5B6 917 aa17.75■□□□□ 0.43
LINC00996-201ENST00000477392 hCG_1984214I3L0E3 225 aa17.74■□□□□ 0.43
LINC00996-201ENST00000477392 CTIFO43310 598 aaKnown RBP17.74■□□□□ 0.43
LINC00996-201ENST00000477392 GNA11P29992 359 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms