RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 ZNFX1Q9P2E3 1918 aaKnown RBP18.57■□□□□ 0.56
COPS3-207ENST00000477299 KLF18A0A0U1RQI7 1052 aa18.56■□□□□ 0.56
COPS3-207ENST00000477299 PALM3A6NDB9 673 aaPredicted RBP18.56■□□□□ 0.56
COPS3-207ENST00000477299 GPR25O00155 361 aa18.56■□□□□ 0.56
COPS3-207ENST00000477299 GRM4Q14833 912 aa18.56■□□□□ 0.56
COPS3-207ENST00000477299 CMTR1Q8N1G2 835 aaKnown RBP18.56■□□□□ 0.56
COPS3-207ENST00000477299 TBC1D32Q96NH3 1257 aa18.56■□□□□ 0.56
COPS3-207ENST00000477299 ARHGAP39Q9C0H5 1083 aa18.56■□□□□ 0.56
COPS3-207ENST00000477299 FEM1BQ9UK73 627 aa18.56■□□□□ 0.56
COPS3-207ENST00000477299 PNMA3Q9UL41 463 aa18.56■□□□□ 0.56
COPS3-207ENST00000477299 PRR12Q9ULL5 1215 aa18.56■□□□□ 0.56
COPS3-207ENST00000477299 ADAMTS5Q9UNA0 930 aa18.56■□□□□ 0.56
COPS3-207ENST00000477299 DTNBO60941 627 aa18.55■□□□□ 0.56
COPS3-207ENST00000477299 PARP1P09874 1014 aaKnown RBP18.55■□□□□ 0.56
COPS3-207ENST00000477299 NEK4P51957 841 aa18.55■□□□□ 0.56
COPS3-207ENST00000477299 LBX1P52954 281 aa18.55■□□□□ 0.56
COPS3-207ENST00000477299 FGD1P98174 961 aa18.55■□□□□ 0.56
COPS3-207ENST00000477299 APOA5Q6Q788 366 aa18.55■□□□□ 0.56
COPS3-207ENST00000477299 NOL8Q76FK4 1167 aaKnown RBP18.55■□□□□ 0.56
COPS3-207ENST00000477299 CATIPQ7Z7H3 387 aa18.55■□□□□ 0.56
COPS3-207ENST00000477299 REPS2Q8NFH8 660 aa18.55■□□□□ 0.56
COPS3-207ENST00000477299 ZNF296Q8WUU4 475 aaPredicted RBP18.55■□□□□ 0.56
COPS3-207ENST00000477299 HOXC10Q9NYD6 342 aa18.55■□□□□ 0.56
COPS3-207ENST00000477299 VWA5AO00534 786 aa18.54■□□□□ 0.56
COPS3-207ENST00000477299 PLEKHA8P1O95397 391 aa18.54■□□□□ 0.56
COPS3-207ENST00000477299 AK2P54819 239 aa18.54■□□□□ 0.56
COPS3-207ENST00000477299 IKQ13123 557 aaPredicted RBP18.54■□□□□ 0.56
COPS3-207ENST00000477299 TMEM132BQ14DG7 1078 aa18.54■□□□□ 0.56
COPS3-207ENST00000477299 BTNL9Q6UXG8 535 aa18.54■□□□□ 0.56
COPS3-207ENST00000477299 LBX2Q6XYB7 198 aa18.54■□□□□ 0.56
COPS3-207ENST00000477299 MICU3Q86XE3 530 aa18.54■□□□□ 0.56
COPS3-207ENST00000477299 TMTC2Q8N394 836 aa18.54■□□□□ 0.56
COPS3-207ENST00000477299 PRPF38AQ8NAV1 312 aaKnown RBP18.54■□□□□ 0.56
COPS3-207ENST00000477299 VAT1LQ9HCJ6 419 aa18.54■□□□□ 0.56
COPS3-207ENST00000477299 FAM217BQ9NTX9 383 aaPredicted RBP18.54■□□□□ 0.56
COPS3-207ENST00000477299 NAP1L2Q9ULW6 460 aaPredicted RBP18.54■□□□□ 0.56
COPS3-207ENST00000477299 HPS5Q9UPZ3 1129 aa18.54■□□□□ 0.56
COPS3-207ENST00000477299 SLC12A7Q9Y666 1083 aa18.54■□□□□ 0.56
COPS3-207ENST00000477299 KLRF2D3W0D1 207 aa18.53■□□□□ 0.56
COPS3-207ENST00000477299 CDC27P30260 824 aa18.53■□□□□ 0.56
COPS3-207ENST00000477299 STAT2P52630 851 aa18.53■□□□□ 0.56
COPS3-207ENST00000477299 SYDE2Q5VT97 1194 aa18.53■□□□□ 0.56
COPS3-207ENST00000477299 FBXL16Q8N461 479 aa18.53■□□□□ 0.56
COPS3-207ENST00000477299 CD99L2Q8TCZ2 262 aa18.53■□□□□ 0.56
COPS3-207ENST00000477299 CHURC1Q8WUH1 139 aa18.53■□□□□ 0.56
COPS3-207ENST00000477299 PORCNQ9H237 461 aa18.53■□□□□ 0.56
COPS3-207ENST00000477299 PLXNB2O15031 1838 aa18.52■□□□□ 0.56
COPS3-207ENST00000477299 CYTH3O43739 400 aa18.52■□□□□ 0.56
COPS3-207ENST00000477299 PLA2G6O60733 806 aa18.52■□□□□ 0.56
COPS3-207ENST00000477299 DDAH1O94760 285 aa18.52■□□□□ 0.56
COPS3-207ENST00000477299 GCLCP48506 637 aaPredicted RBP18.52■□□□□ 0.56
COPS3-207ENST00000477299 ERVK-9P63128 1117 aa18.52■□□□□ 0.56
COPS3-207ENST00000477299 ERVK-24P63145 666 aa18.52■□□□□ 0.56
COPS3-207ENST00000477299 SP3Q02447 781 aa18.52■□□□□ 0.56
COPS3-207ENST00000477299 PLS1Q14651 629 aa18.52■□□□□ 0.56
COPS3-207ENST00000477299 ASPRV1Q53RT3 343 aa18.52■□□□□ 0.56
COPS3-207ENST00000477299 CCDC174Q6PII3 467 aa18.52■□□□□ 0.56
COPS3-207ENST00000477299 ADGRF4Q8IZF3 695 aa18.52■□□□□ 0.56
COPS3-207ENST00000477299 CPXCR1Q8N123 301 aa18.52■□□□□ 0.56
COPS3-207ENST00000477299 FANCBQ8NB91 859 aa18.52■□□□□ 0.56
COPS3-207ENST00000477299 UPF2Q9HAU5 1272 aaKnown RBP18.52■□□□□ 0.56
COPS3-207ENST00000477299 RAVER2Q9HCJ3 691 aaKnown RBP18.52■□□□□ 0.56
COPS3-207ENST00000477299 MORF4L1Q9UBU8 362 aa18.52■□□□□ 0.56
COPS3-207ENST00000477299 TPCN1Q9ULQ1 816 aa18.52■□□□□ 0.56
COPS3-207ENST00000477299 RIPK3Q9Y572 518 aa18.52■□□□□ 0.56
COPS3-207ENST00000477299 ZNF536O15090 1300 aa18.51■□□□□ 0.55
COPS3-207ENST00000477299 ZBTB43O43298 467 aa18.51■□□□□ 0.55
COPS3-207ENST00000477299 PPFIA3O75145 1194 aa18.51■□□□□ 0.55
COPS3-207ENST00000477299 LARGE1O95461 756 aa18.51■□□□□ 0.55
COPS3-207ENST00000477299 PDIA3P30101 505 aaKnown RBP18.51■□□□□ 0.55
COPS3-207ENST00000477299 SLC4A3P48751 1232 aa18.51■□□□□ 0.55
COPS3-207ENST00000477299 CCT2P78371 535 aaKnown RBP18.51■□□□□ 0.55
COPS3-207ENST00000477299 STK3Q13188 491 aa18.51■□□□□ 0.55
COPS3-207ENST00000477299 GPATCH4Q5T3I0 446 aaKnown RBP18.51■□□□□ 0.55
COPS3-207ENST00000477299 FAM160B2Q86V87 743 aa18.51■□□□□ 0.55
COPS3-207ENST00000477299 CCDC82Q8N4S0 544 aa18.51■□□□□ 0.55
COPS3-207ENST00000477299 SRBD1Q8N5C6 995 aaKnown RBP18.51■□□□□ 0.55
COPS3-207ENST00000477299 PIBF1Q8WXW3 757 aa18.51■□□□□ 0.55
COPS3-207ENST00000477299 AGBL1Q96MI9 1066 aa18.51■□□□□ 0.55
COPS3-207ENST00000477299 ALDH8A1Q9H2A2 487 aaPredicted RBP18.51■□□□□ 0.55
COPS3-207ENST00000477299 JMJD4Q9H9V9 463 aa18.51■□□□□ 0.55
COPS3-207ENST00000477299 EFCC1Q9HA90 598 aa18.51■□□□□ 0.55
COPS3-207ENST00000477299 SLC38A10Q9HBR0 1119 aa18.51■□□□□ 0.55
COPS3-207ENST00000477299 NCOA5Q9HCD5 579 aaKnown RBP18.51■□□□□ 0.55
COPS3-207ENST00000477299 ZNF214Q9UL59 606 aaPredicted RBP18.51■□□□□ 0.55
COPS3-207ENST00000477299 RABGAP1Q9Y3P9 1069 aa18.51■□□□□ 0.55
COPS3-207ENST00000477299 MYPNQ86TC9 1320 aa18.5■□□□□ 0.55
COPS3-207ENST00000477299 hCG_1642624A0A1W2PR95 340 aa18.5■□□□□ 0.55
COPS3-207ENST00000477299 GOLGA8BA8MQT2 603 aa18.5■□□□□ 0.55
COPS3-207ENST00000477299 FKTNO75072 461 aa18.5■□□□□ 0.55
COPS3-207ENST00000477299 CD2BP2O95400 341 aaKnown RBP18.5■□□□□ 0.55
COPS3-207ENST00000477299 ADD1P35611 737 aaKnown RBP18.5■□□□□ 0.55
COPS3-207ENST00000477299 CTCFP49711 727 aaPredicted RBP18.5■□□□□ 0.55
COPS3-207ENST00000477299 EVCP57679 992 aa18.5■□□□□ 0.55
COPS3-207ENST00000477299 FAM110CQ1W6H9 321 aa18.5■□□□□ 0.55
COPS3-207ENST00000477299 GPRC5AQ8NFJ5 357 aa18.5■□□□□ 0.55
COPS3-207ENST00000477299 MOV10L1Q9BXT6 1211 aaKnown RBP18.5■□□□□ 0.55
COPS3-207ENST00000477299 GOLGA8AA7E2F4 631 aa18.49■□□□□ 0.55
COPS3-207ENST00000477299 ZBED4O75132 1171 aa18.49■□□□□ 0.55
COPS3-207ENST00000477299 LACTBP83111 547 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms