RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 FAM71BQ8TC56 605 aa9.44□□□□□ -0.9
VAPB-205ENST00000476395 CEP89Q96ST8 783 aa9.44□□□□□ -0.9
VAPB-205ENST00000476395 CNNM1Q9NRU3 951 aa9.44□□□□□ -0.9
VAPB-205ENST00000476395 TRIM10Q9UDY6 481 aa9.44□□□□□ -0.9
VAPB-205ENST00000476395 ANAPC4Q9UJX5 808 aa9.44□□□□□ -0.9
VAPB-205ENST00000476395 REXO2Q9Y3B8 237 aaKnown RBP9.44□□□□□ -0.9
VAPB-205ENST00000476395 MAST2Q6P0Q8 1798 aa9.44□□□□□ -0.9
VAPB-205ENST00000476395 MROH5Q6ZUA9 1318 aa9.44□□□□□ -0.9
VAPB-205ENST00000476395 NRAPQ86VF7 1730 aa9.44□□□□□ -0.9
VAPB-205ENST00000476395 CYP2D7A0A087X1C5 515 aa9.44□□□□□ -0.9
VAPB-205ENST00000476395 CCP110O43303 1012 aa9.44□□□□□ -0.9
VAPB-205ENST00000476395 CBFA2T2O43439 604 aa9.44□□□□□ -0.9
VAPB-205ENST00000476395 GGCXP38435 758 aa9.44□□□□□ -0.9
VAPB-205ENST00000476395 C3orf67Q6ZVT6 689 aa9.44□□□□□ -0.9
VAPB-205ENST00000476395 NBPF5PQ86XG9 351 aaPredicted RBP9.44□□□□□ -0.9
VAPB-205ENST00000476395 ZNF654Q8IZM8 581 aa9.44□□□□□ -0.9
VAPB-205ENST00000476395 ENAHQ8N8S7 591 aaPredicted RBP9.44□□□□□ -0.9
VAPB-205ENST00000476395 MLKLQ8NB16 471 aa9.44□□□□□ -0.9
VAPB-205ENST00000476395 RNF217Q8TC41 542 aa9.44□□□□□ -0.9
VAPB-205ENST00000476395 AIDAQ96BJ3 306 aa9.44□□□□□ -0.9
VAPB-205ENST00000476395 AATFQ9NY61 560 aaKnown RBP eCLIP9.44□□□□□ -0.9
VAPB-205ENST00000476395 HDAC6Q9UBN7 1215 aa9.44□□□□□ -0.9
VAPB-205ENST00000476395 ENC1O14682 589 aa9.43□□□□□ -0.9
VAPB-205ENST00000476395 EIF3JO75822 258 aaKnown RBP9.43□□□□□ -0.9
VAPB-205ENST00000476395 CDC25AP30304 524 aa9.43□□□□□ -0.9
VAPB-205ENST00000476395 TRDNQ13061 729 aa9.43□□□□□ -0.9
VAPB-205ENST00000476395 PDXDC2PQ6P474 469 aa9.43□□□□□ -0.9
VAPB-205ENST00000476395 JMYQ8N9B5 988 aa9.43□□□□□ -0.9
VAPB-205ENST00000476395 MSANTD4Q8NCY6 345 aa9.43□□□□□ -0.9
VAPB-205ENST00000476395 SDR42E1Q8WUS8 393 aa9.43□□□□□ -0.9
VAPB-205ENST00000476395 HNRNPLLQ8WVV9 542 aaKnown RBP9.43□□□□□ -0.9
VAPB-205ENST00000476395 CABP5Q9NP86 173 aa9.43□□□□□ -0.9
VAPB-205ENST00000476395 CDC23Q9UJX2 597 aa9.43□□□□□ -0.9
VAPB-205ENST00000476395 TBC1D2BQ9UPU7 963 aa9.43□□□□□ -0.9
VAPB-205ENST00000476395 ZC3H4Q9UPT8 1303 aaKnown RBP9.43□□□□□ -0.9
VAPB-205ENST00000476395 COL14A1Q05707 1796 aaKnown RBP9.43□□□□□ -0.9
VAPB-205ENST00000476395 NKRFO15226 690 aaKnown RBP eCLIP9.43□□□□□ -0.9
VAPB-205ENST00000476395 SRGAP2O75044 1071 aa9.43□□□□□ -0.9
VAPB-205ENST00000476395 PAX7P23759 505 aa9.43□□□□□ -0.9
VAPB-205ENST00000476395 TROAPQ12815 778 aa9.43□□□□□ -0.9
VAPB-205ENST00000476395 RILPL1Q5EBL4 403 aa9.43□□□□□ -0.9
VAPB-205ENST00000476395 IRF2BP1Q8IU81 584 aa9.43□□□□□ -0.9
VAPB-205ENST00000476395 C4orf32Q8N8J7 132 aa9.43□□□□□ -0.9
VAPB-205ENST00000476395 MIGA1Q8NAN2 632 aa9.43□□□□□ -0.9
VAPB-205ENST00000476395 PANX2Q96RD6 677 aa9.43□□□□□ -0.9
VAPB-205ENST00000476395 VPS54Q9P1Q0 977 aa9.43□□□□□ -0.9
VAPB-205ENST00000476395 TRMT112Q9UI30 125 aaKnown RBP9.43□□□□□ -0.9
VAPB-205ENST00000476395 CAPN7Q9Y6W3 813 aa9.43□□□□□ -0.9
VAPB-205ENST00000476395 BAZ2BQ9UIF8 2168 aaKnown RBP9.43□□□□□ -0.9
VAPB-205ENST00000476395 DEXIO95424 95 aa9.43□□□□□ -0.9
VAPB-205ENST00000476395 ERCC5P28715 1186 aaPredicted RBP9.43□□□□□ -0.9
VAPB-205ENST00000476395 RTN1Q16799 776 aa9.43□□□□□ -0.9
VAPB-205ENST00000476395 SLC35G1Q2M3R5 365 aa9.43□□□□□ -0.9
VAPB-205ENST00000476395 RASGRP2Q7LDG7 609 aa9.43□□□□□ -0.9
VAPB-205ENST00000476395 TRIML1Q8N9V2 468 aa9.43□□□□□ -0.9
VAPB-205ENST00000476395 SYMPKQ92797 1274 aaKnown RBP9.43□□□□□ -0.9
VAPB-205ENST00000476395 SRCAPQ6ZRS2 3230 aa9.43□□□□□ -0.9
VAPB-205ENST00000476395 DDX60LQ5H9U9 1706 aaKnown RBP9.42□□□□□ -0.9
VAPB-205ENST00000476395 ERVV-1B6SEH8 477 aa9.42□□□□□ -0.9
VAPB-205ENST00000476395 UQCRFS1P1P0C7P4 283 aa9.42□□□□□ -0.9
VAPB-205ENST00000476395 AMPD2Q01433 879 aa9.42□□□□□ -0.9
VAPB-205ENST00000476395 PPARAQ07869 468 aa9.42□□□□□ -0.9
VAPB-205ENST00000476395 ACTN3Q08043 901 aaPredicted RBP9.42□□□□□ -0.9
VAPB-205ENST00000476395 NFXL1Q6ZNB6 911 aa9.42□□□□□ -0.9
VAPB-205ENST00000476395 TSHZ1Q6ZSZ6 1077 aa9.42□□□□□ -0.9
VAPB-205ENST00000476395 NAPBQ9H115 298 aa9.42□□□□□ -0.9
VAPB-205ENST00000476395 LRRC10BA6NIK2 292 aa9.42□□□□□ -0.9
VAPB-205ENST00000476395 RASSF10A6NK89 507 aa9.42□□□□□ -0.9
VAPB-205ENST00000476395 SKAP2O75563 359 aaPredicted RBP9.42□□□□□ -0.9
VAPB-205ENST00000476395 RCAN1P53805 252 aa9.42□□□□□ -0.9
VAPB-205ENST00000476395 EIF5P55010 431 aaKnown RBP9.42□□□□□ -0.9
VAPB-205ENST00000476395 CCDC96Q2M329 555 aa9.42□□□□□ -0.9
VAPB-205ENST00000476395 MFSD6Q6ZSS7 791 aa9.42□□□□□ -0.9
VAPB-205ENST00000476395 RTL9Q8NET4 1388 aa9.42□□□□□ -0.9
VAPB-205ENST00000476395 TNKSO95271 1327 aa9.42□□□□□ -0.9
VAPB-205ENST00000476395 CNTNAP5Q8WYK1 1306 aa9.42□□□□□ -0.9
VAPB-205ENST00000476395 AGPSO00116 658 aa9.42□□□□□ -0.9
VAPB-205ENST00000476395 TOM1O60784 492 aa9.42□□□□□ -0.9
VAPB-205ENST00000476395 MFAP3LO75121 409 aa9.42□□□□□ -0.9
VAPB-205ENST00000476395 NTSR2O95665 410 aa9.42□□□□□ -0.9
VAPB-205ENST00000476395 EVA1CP58658 441 aa9.42□□□□□ -0.9
VAPB-205ENST00000476395 OLFM4Q6UX06 510 aa9.42□□□□□ -0.9
VAPB-205ENST00000476395 BCAS4Q8TDM0 211 aa9.42□□□□□ -0.9
VAPB-205ENST00000476395 SMARCC1Q92922 1105 aaPredicted RBP9.42□□□□□ -0.9
VAPB-205ENST00000476395 MTA3Q9BTC8 594 aa9.42□□□□□ -0.9
VAPB-205ENST00000476395 SLC4A4Q9Y6R1 1079 aa9.42□□□□□ -0.9
VAPB-205ENST00000476395 NUTM2BA6NNL0 878 aaPredicted RBP9.41□□□□□ -0.9
VAPB-205ENST00000476395 NUTM2EB1AL46 878 aaPredicted RBP9.41□□□□□ -0.9
VAPB-205ENST00000476395 IRAK1P51617 712 aa9.41□□□□□ -0.9
VAPB-205ENST00000476395 STX17P56962 302 aa9.41□□□□□ -0.9
VAPB-205ENST00000476395 WTAPQ15007 396 aa9.41□□□□□ -0.9
VAPB-205ENST00000476395 SPATA1Q5VX52 437 aa9.41□□□□□ -0.9
VAPB-205ENST00000476395 SLC51AQ86UW1 340 aa9.41□□□□□ -0.9
VAPB-205ENST00000476395 NUTM2AQ8IVF1 878 aaPredicted RBP9.41□□□□□ -0.9
VAPB-205ENST00000476395 KRT23Q9C075 422 aa9.41□□□□□ -0.9
VAPB-205ENST00000476395 HPCAL4Q9UM19 191 aa9.41□□□□□ -0.9
VAPB-205ENST00000476395 AHDC1Q5TGY3 1603 aaPredicted RBP9.41□□□□□ -0.9
VAPB-205ENST00000476395 M0R2N6 131 aa9.41□□□□□ -0.9
VAPB-205ENST00000476395 NMT2O60551 498 aa9.41□□□□□ -0.9
VAPB-205ENST00000476395 ERLIN1O75477 346 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms