RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 PRPF38AQ8NAV1 312 aaKnown RBP15.68■□□□□ 0.1
MRPL55-228ENST00000476267 FERMT2Q96AC1 680 aa15.68■□□□□ 0.1
MRPL55-228ENST00000476267 TRIM43Q96BQ3 446 aaPredicted RBP15.68■□□□□ 0.1
MRPL55-228ENST00000476267 LENG1Q96BZ8 264 aaPredicted RBP15.68■□□□□ 0.1
MRPL55-228ENST00000476267 FGD4Q96M96 766 aa15.68■□□□□ 0.1
MRPL55-228ENST00000476267 GUCD1Q96NT3 240 aa15.68■□□□□ 0.1
MRPL55-228ENST00000476267 MKNK2Q9HBH9 465 aa15.68■□□□□ 0.1
MRPL55-228ENST00000476267 PRKAG2Q9UGJ0 569 aa15.68■□□□□ 0.1
MRPL55-228ENST00000476267 TTC41PQ6P2S7 1318 aa15.68■□□□□ 0.1
MRPL55-228ENST00000476267 SYNGAP1Q96PV0 1343 aa15.68■□□□□ 0.1
MRPL55-228ENST00000476267 SALL3Q9BXA9 1300 aa15.68■□□□□ 0.1
MRPL55-228ENST00000476267 A0A1W2PQ45 241 aaPredicted RBP15.67■□□□□ 0.1
MRPL55-228ENST00000476267 A0A1W2PQY0 241 aa15.67■□□□□ 0.1
MRPL55-228ENST00000476267 SNAI1O95863 264 aaPredicted RBP15.67■□□□□ 0.1
MRPL55-228ENST00000476267 PGK1P00558 417 aa15.67■□□□□ 0.1
MRPL55-228ENST00000476267 RARBP10826 455 aa15.67■□□□□ 0.1
MRPL55-228ENST00000476267 AKR1A1P14550 325 aa15.67■□□□□ 0.1
MRPL55-228ENST00000476267 ITGB8P26012 769 aa15.67■□□□□ 0.1
MRPL55-228ENST00000476267 SHHQ15465 462 aa15.67■□□□□ 0.1
MRPL55-228ENST00000476267 C9orf50Q5SZB4 431 aa15.67■□□□□ 0.1
MRPL55-228ENST00000476267 CCSAPQ6IQ19 270 aaPredicted RBP15.67■□□□□ 0.1
MRPL55-228ENST00000476267 IFNL3Q8IZI9 196 aa15.67■□□□□ 0.1
MRPL55-228ENST00000476267 BADQ92934 168 aa15.67■□□□□ 0.1
MRPL55-228ENST00000476267 CEP95Q96GE4 821 aa15.67■□□□□ 0.1
MRPL55-228ENST00000476267 GPATCH3Q96I76 525 aa15.67■□□□□ 0.1
MRPL55-228ENST00000476267 SEC62Q99442 399 aaKnown RBP15.67■□□□□ 0.1
MRPL55-228ENST00000476267 SLC38A10Q9HBR0 1119 aa15.67■□□□□ 0.1
MRPL55-228ENST00000476267 MTMR4Q9NYA4 1195 aa15.67■□□□□ 0.1
MRPL55-228ENST00000476267 CLIP2Q9UDT6 1046 aa15.67■□□□□ 0.1
MRPL55-228ENST00000476267 A0A0C4DFX4 3053 aa15.67■□□□□ 0.1
MRPL55-228ENST00000476267 PATL2C9JE40 543 aaKnown RBP15.66■□□□□ 0.1
MRPL55-228ENST00000476267 FOXP2O15409 715 aa15.66■□□□□ 0.1
MRPL55-228ENST00000476267 RAD21O60216 631 aa15.66■□□□□ 0.1
MRPL55-228ENST00000476267 PRDM1O75626 825 aa15.66■□□□□ 0.1
MRPL55-228ENST00000476267 ZNF467Q7Z7K2 595 aaPredicted RBP15.66■□□□□ 0.1
MRPL55-228ENST00000476267 GMCL1P1Q8NEA9 526 aa15.66■□□□□ 0.1
MRPL55-228ENST00000476267 OTUD7AQ8TE49 926 aaPredicted RBP15.66■□□□□ 0.1
MRPL55-228ENST00000476267 PRDM5Q9NQX1 630 aaPredicted RBP15.66■□□□□ 0.1
MRPL55-228ENST00000476267 PCDHB15Q9Y5E8 787 aa15.66■□□□□ 0.1
MRPL55-228ENST00000476267 SYNRGQ9UMZ2 1314 aa15.66■□□□□ 0.1
MRPL55-228ENST00000476267 DLL1O00548 723 aa15.65■□□□□ 0.1
MRPL55-228ENST00000476267 ADCY6O43306 1168 aa15.65■□□□□ 0.1
MRPL55-228ENST00000476267 MYCNP04198 464 aaPredicted RBP15.65■□□□□ 0.1
MRPL55-228ENST00000476267 TDO2P48775 406 aa15.65■□□□□ 0.1
MRPL55-228ENST00000476267 TLE2Q04725 743 aa15.65■□□□□ 0.1
MRPL55-228ENST00000476267 ZMYM1Q5SVZ6 1142 aa15.65■□□□□ 0.1
MRPL55-228ENST00000476267 RNF180Q86T96 592 aa15.65■□□□□ 0.1
MRPL55-228ENST00000476267 KLHDC9Q8NEP7 349 aa15.65■□□□□ 0.1
MRPL55-228ENST00000476267 NEDD1Q8NHV4 660 aa15.65■□□□□ 0.1
MRPL55-228ENST00000476267 KIAA0355O15063 1070 aa15.64■□□□□ 0.09
MRPL55-228ENST00000476267 TTLL1O95922 423 aa15.64■□□□□ 0.09
MRPL55-228ENST00000476267 OAZ1P54368 228 aa15.64■□□□□ 0.09
MRPL55-228ENST00000476267 ANKRD33Q7Z3H0 272 aa15.64■□□□□ 0.09
MRPL55-228ENST00000476267 ZNF444Q8N0Y2 327 aaPredicted RBP15.64■□□□□ 0.09
MRPL55-228ENST00000476267 LRRC47Q8N1G4 583 aaKnown RBP15.64■□□□□ 0.09
MRPL55-228ENST00000476267 TSEN34Q9BSV6 310 aaKnown RBP15.64■□□□□ 0.09
MRPL55-228ENST00000476267 KATNBL1Q9H079 304 aa15.64■□□□□ 0.09
MRPL55-228ENST00000476267 ZNF287Q9HBT7 754 aa15.64■□□□□ 0.09
MRPL55-228ENST00000476267 RAVER2Q9HCJ3 691 aaKnown RBP15.64■□□□□ 0.09
MRPL55-228ENST00000476267 FEM1BQ9UK73 627 aa15.64■□□□□ 0.09
MRPL55-228ENST00000476267 CNPY2Q9Y2B0 182 aa15.64■□□□□ 0.09
MRPL55-228ENST00000476267 LCTP09848 1927 aa15.64■□□□□ 0.09
MRPL55-228ENST00000476267 MCM3APO60318 1980 aa15.64■□□□□ 0.09
MRPL55-228ENST00000476267 MYADML2A6NDP7 307 aa15.63■□□□□ 0.09
MRPL55-228ENST00000476267 ZBED4O75132 1171 aa15.63■□□□□ 0.09
MRPL55-228ENST00000476267 CLTBP09497 229 aa15.63■□□□□ 0.09
MRPL55-228ENST00000476267 CST5P28325 142 aaPredicted RBP15.63■□□□□ 0.09
MRPL55-228ENST00000476267 ACLYP53396 1101 aa15.63■□□□□ 0.09
MRPL55-228ENST00000476267 EPHB4P54760 987 aa15.63■□□□□ 0.09
MRPL55-228ENST00000476267 CPXCR1Q8N123 301 aa15.63■□□□□ 0.09
MRPL55-228ENST00000476267 KIFC2Q96AC6 838 aa15.63■□□□□ 0.09
MRPL55-228ENST00000476267 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.63■□□□□ 0.09
MRPL55-228ENST00000476267 TACC3Q9Y6A5 838 aa15.63■□□□□ 0.09
MRPL55-228ENST00000476267 ZNF536O15090 1300 aa15.63■□□□□ 0.09
MRPL55-228ENST00000476267 SPTBN5Q9NRC6 3674 aaKnown RBP15.62■□□□□ 0.09
MRPL55-228ENST00000476267 MOXD2PA6NHM9 499 aa15.62■□□□□ 0.09
MRPL55-228ENST00000476267 DUSP11O75319 330 aaKnown RBP15.62■□□□□ 0.09
MRPL55-228ENST00000476267 APPP05067 770 aa15.62■□□□□ 0.09
MRPL55-228ENST00000476267 PPARAQ07869 468 aa15.62■□□□□ 0.09
MRPL55-228ENST00000476267 FAAP100Q0VG06 881 aa15.62■□□□□ 0.09
MRPL55-228ENST00000476267 CHST13Q8NET6 341 aa15.62■□□□□ 0.09
MRPL55-228ENST00000476267 DDX11Q96FC9 970 aa15.62■□□□□ 0.09
MRPL55-228ENST00000476267 TOX2Q96NM4 488 aa15.62■□□□□ 0.09
MRPL55-228ENST00000476267 FAM184BQ9ULE4 1060 aa15.62■□□□□ 0.09
MRPL55-228ENST00000476267 PRUNE2Q8WUY3 3088 aa15.62■□□□□ 0.09
MRPL55-228ENST00000476267 ERC2O15083 957 aa15.61■□□□□ 0.09
MRPL55-228ENST00000476267 BMP3P12645 472 aa15.61■□□□□ 0.09
MRPL55-228ENST00000476267 NOVP48745 357 aa15.61■□□□□ 0.09
MRPL55-228ENST00000476267 NKX3-2P78367 333 aa15.61■□□□□ 0.09
MRPL55-228ENST00000476267 IRX5P78411 483 aaPredicted RBP15.61■□□□□ 0.09
MRPL55-228ENST00000476267 SMAD3P84022 425 aaKnown RBP15.61■□□□□ 0.09
MRPL55-228ENST00000476267 PDE4BQ07343 736 aa15.61■□□□□ 0.09
MRPL55-228ENST00000476267 ACVR2BQ13705 512 aa15.61■□□□□ 0.09
MRPL55-228ENST00000476267 LRRFIP1Q32MZ4 808 aaKnown RBP15.61■□□□□ 0.09
MRPL55-228ENST00000476267 ZNF697Q5TEC3 545 aa15.61■□□□□ 0.09
MRPL55-228ENST00000476267 SLFN13Q68D06 897 aa15.61■□□□□ 0.09
MRPL55-228ENST00000476267 GMCL1Q96IK5 515 aa15.61■□□□□ 0.09
MRPL55-228ENST00000476267 FAM161BQ96MY7 647 aa15.61■□□□□ 0.09
MRPL55-228ENST00000476267 NACAP1Q9BZK3 213 aa15.61■□□□□ 0.09
MRPL55-228ENST00000476267 UPF3AQ9H1J1 476 aaKnown RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms