RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 EGR3Q06889 387 aa7.62□□□□□ -1.19
PTCD3-211ENST00000476215 NR0B2Q15466 257 aa7.62□□□□□ -1.19
PTCD3-211ENST00000476215 NBPF9Q3BBW0 867 aa7.62□□□□□ -1.19
PTCD3-211ENST00000476215 NBPF6Q5VWK0 638 aa7.62□□□□□ -1.19
PTCD3-211ENST00000476215 C6orf15Q6UXA7 325 aaPredicted RBP7.62□□□□□ -1.19
PTCD3-211ENST00000476215 PPFIBP1Q86W92 1011 aa7.62□□□□□ -1.19
PTCD3-211ENST00000476215 CCDC144CPQ8IYA2 1237 aa7.62□□□□□ -1.19
PTCD3-211ENST00000476215 CELF2-AS1Q8N7Q2 184 aa7.62□□□□□ -1.19
PTCD3-211ENST00000476215 NBPF4Q96M43 638 aa7.62□□□□□ -1.19
PTCD3-211ENST00000476215 PCDHA11Q9Y5I1 949 aa7.62□□□□□ -1.19
PTCD3-211ENST00000476215 IGSF3O75054 1194 aa7.61□□□□□ -1.19
PTCD3-211ENST00000476215 FARP2O94887 1054 aaPredicted RBP7.61□□□□□ -1.19
PTCD3-211ENST00000476215 KIAA1211LQ6NV74 962 aa7.61□□□□□ -1.19
PTCD3-211ENST00000476215 DAGLBQ8NCG7 672 aa7.61□□□□□ -1.19
PTCD3-211ENST00000476215 PDZD8Q8NEN9 1154 aa7.61□□□□□ -1.19
PTCD3-211ENST00000476215 MICAL1Q8TDZ2 1067 aa7.61□□□□□ -1.19
PTCD3-211ENST00000476215 SMARCC1Q92922 1105 aaPredicted RBP7.61□□□□□ -1.19
PTCD3-211ENST00000476215 ADAMTS10Q9H324 1103 aa7.61□□□□□ -1.19
PTCD3-211ENST00000476215 B2RBV5 119 aa7.6□□□□□ -1.19
PTCD3-211ENST00000476215 NMIQ13287 307 aaPredicted RBP7.6□□□□□ -1.19
PTCD3-211ENST00000476215 DDR2Q16832 855 aa7.6□□□□□ -1.19
PTCD3-211ENST00000476215 AXDND1Q5T1B0 1012 aaPredicted RBP7.6□□□□□ -1.19
PTCD3-211ENST00000476215 FAM178BQ8IXR5 827 aa7.6□□□□□ -1.19
PTCD3-211ENST00000476215 KLHL6Q8WZ60 621 aa7.6□□□□□ -1.19
PTCD3-211ENST00000476215 PRR13Q9NZ81 148 aa7.6□□□□□ -1.19
PTCD3-211ENST00000476215 RAC2P15153 192 aa7.59□□□□□ -1.19
PTCD3-211ENST00000476215 NCAPHQ15003 741 aa7.59□□□□□ -1.19
PTCD3-211ENST00000476215 TMEM67Q5HYA8 995 aa7.59□□□□□ -1.19
PTCD3-211ENST00000476215 DCAF15Q66K64 600 aa7.59□□□□□ -1.19
PTCD3-211ENST00000476215 RNF111Q6ZNA4 994 aa7.59□□□□□ -1.19
PTCD3-211ENST00000476215 ZNF655Q8N720 491 aaPredicted RBP7.59□□□□□ -1.19
PTCD3-211ENST00000476215 G6PC3Q9BUM1 346 aa7.59□□□□□ -1.19
PTCD3-211ENST00000476215 SIRPGQ9P1W8 387 aa7.59□□□□□ -1.19
PTCD3-211ENST00000476215 FBXL21Q9UKT6 434 aa7.59□□□□□ -1.19
PTCD3-211ENST00000476215 GJB6O95452 261 aa7.58□□□□□ -1.2
PTCD3-211ENST00000476215 LTKP29376 864 aa7.58□□□□□ -1.2
PTCD3-211ENST00000476215 AUHQ13825 339 aaKnown RBP7.58□□□□□ -1.2
PTCD3-211ENST00000476215 C7orf61Q8IZ16 206 aa7.58□□□□□ -1.2
PTCD3-211ENST00000476215 LILRA2Q8N149 483 aa7.58□□□□□ -1.2
PTCD3-211ENST00000476215 LINC01599Q8WXQ3 324 aa7.58□□□□□ -1.2
PTCD3-211ENST00000476215 LIN37Q96GY3 246 aaPredicted RBP7.58□□□□□ -1.2
PTCD3-211ENST00000476215 HAUS7Q99871 368 aa7.58□□□□□ -1.2
PTCD3-211ENST00000476215 KRTAP9-9Q9BYP9 154 aa7.58□□□□□ -1.2
PTCD3-211ENST00000476215 KRTAP9-4Q9BYQ2 154 aa7.58□□□□□ -1.2
PTCD3-211ENST00000476215 LRRC10BA6NIK2 292 aa7.57□□□□□ -1.2
PTCD3-211ENST00000476215 CCDC85CA6NKD9 419 aa7.57□□□□□ -1.2
PTCD3-211ENST00000476215 SIGLEC6O43699 453 aa7.57□□□□□ -1.2
PTCD3-211ENST00000476215 ERVFC1P60507 584 aa7.57□□□□□ -1.2
PTCD3-211ENST00000476215 SNW1Q13573 536 aaKnown RBP7.57□□□□□ -1.2
PTCD3-211ENST00000476215 ZNF648Q5T619 568 aaPredicted RBP7.57□□□□□ -1.2
PTCD3-211ENST00000476215 HEATR6Q6AI08 1181 aaKnown RBP7.57□□□□□ -1.2
PTCD3-211ENST00000476215 USHBP1Q8N6Y0 703 aa7.57□□□□□ -1.2
PTCD3-211ENST00000476215 ABHD4Q8TB40 342 aa7.57□□□□□ -1.2
PTCD3-211ENST00000476215 MYLIPQ8WY64 445 aa7.57□□□□□ -1.2
PTCD3-211ENST00000476215 FAM84AQ96KN4 292 aa7.57□□□□□ -1.2
PTCD3-211ENST00000476215 LNPKQ9C0E8 428 aa7.57□□□□□ -1.2
PTCD3-211ENST00000476215 ASCC2Q9H1I8 757 aaPredicted RBP7.57□□□□□ -1.2
PTCD3-211ENST00000476215 OSBPL2Q9H1P3 480 aa7.57□□□□□ -1.2
PTCD3-211ENST00000476215 EBF1Q9UH73 591 aa7.57□□□□□ -1.2
PTCD3-211ENST00000476215 PCDHB12Q9Y5F1 795 aa7.57□□□□□ -1.2
PTCD3-211ENST00000476215 ARID1BQ8NFD5 2236 aaPredicted RBP7.56□□□□□ -1.2
PTCD3-211ENST00000476215 FITM1A5D6W6 292 aa7.56□□□□□ -1.2
PTCD3-211ENST00000476215 HK2P52789 917 aa7.56□□□□□ -1.2
PTCD3-211ENST00000476215 JAG1P78504 1218 aa7.56□□□□□ -1.2
PTCD3-211ENST00000476215 SERINC3Q13530 473 aa7.56□□□□□ -1.2
PTCD3-211ENST00000476215 TCEAL1Q15170 157 aa7.56□□□□□ -1.2
PTCD3-211ENST00000476215 CLEC16AQ2KHT3 1053 aa7.56□□□□□ -1.2
PTCD3-211ENST00000476215 DPH6Q7L8W6 267 aa7.56□□□□□ -1.2
PTCD3-211ENST00000476215 TMC3Q7Z5M5 1100 aa7.56□□□□□ -1.2
PTCD3-211ENST00000476215 LINC00116Q8NCU8 138 aa7.56□□□□□ -1.2
PTCD3-211ENST00000476215 TCTN2Q96GX1 697 aa7.56□□□□□ -1.2
PTCD3-211ENST00000476215 PRDM14Q9GZV8 571 aa7.56□□□□□ -1.2
PTCD3-211ENST00000476215 SHOXO15266 292 aa7.55□□□□□ -1.2
PTCD3-211ENST00000476215 CBFA2T2O43439 604 aa7.55□□□□□ -1.2
PTCD3-211ENST00000476215 EPHX1P07099 455 aa7.55□□□□□ -1.2
PTCD3-211ENST00000476215 CD247P20963 164 aa7.55□□□□□ -1.2
PTCD3-211ENST00000476215 CHRNEQ04844 493 aa7.55□□□□□ -1.2
PTCD3-211ENST00000476215 MLANAQ16655 118 aa7.55□□□□□ -1.2
PTCD3-211ENST00000476215 CCDC144BQ3MJ40 725 aa7.55□□□□□ -1.2
PTCD3-211ENST00000476215 ANKRD39Q53RE8 183 aa7.55□□□□□ -1.2
PTCD3-211ENST00000476215 MRM1Q6IN84 353 aaKnown RBP7.55□□□□□ -1.2
PTCD3-211ENST00000476215 ADAT2Q7Z6V5 191 aaKnown RBP7.55□□□□□ -1.2
PTCD3-211ENST00000476215 CILP2Q8IUL8 1156 aa7.55□□□□□ -1.2
PTCD3-211ENST00000476215 OXR1Q8N573 874 aa7.55□□□□□ -1.2
PTCD3-211ENST00000476215 ANKS4BQ8N8V4 417 aa7.55□□□□□ -1.2
PTCD3-211ENST00000476215 ZSWIM4Q9H7M6 989 aa7.55□□□□□ -1.2
PTCD3-211ENST00000476215 ZNF451Q9Y4E5 1061 aa7.55□□□□□ -1.2
PTCD3-211ENST00000476215 TMEM82A0PJX8 343 aa7.54□□□□□ -1.2
PTCD3-211ENST00000476215 PRAMEF1O95521 474 aa7.54□□□□□ -1.2
PTCD3-211ENST00000476215 DUSP4Q13115 394 aa7.54□□□□□ -1.2
PTCD3-211ENST00000476215 BMS1Q14692 1282 aaKnown RBP7.54□□□□□ -1.2
PTCD3-211ENST00000476215 SNX17Q15036 470 aa7.54□□□□□ -1.2
PTCD3-211ENST00000476215 NOL9Q5SY16 702 aaKnown RBP7.54□□□□□ -1.2
PTCD3-211ENST00000476215 PRR23BQ6ZRT6 265 aa7.54□□□□□ -1.2
PTCD3-211ENST00000476215 EEPD1Q7L9B9 569 aa7.54□□□□□ -1.2
PTCD3-211ENST00000476215 FGD4Q96M96 766 aa7.54□□□□□ -1.2
PTCD3-211ENST00000476215 KLHL25Q9H0H3 589 aa7.54□□□□□ -1.2
PTCD3-211ENST00000476215 GBP3Q9H0R5 595 aa7.54□□□□□ -1.2
PTCD3-211ENST00000476215 GP6Q9HCN6 339 aa7.54□□□□□ -1.2
PTCD3-211ENST00000476215 GFOD1Q9NXC2 390 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms