RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 KIF5BP33176 963 aa8.18□□□□□ -1.1
SHQ1-207ENST00000475558 CDK8P49336 464 aa8.18□□□□□ -1.1
SHQ1-207ENST00000475558 CTDSPL2Q05D32 466 aa8.18□□□□□ -1.1
SHQ1-207ENST00000475558 RRP12Q5JTH9 1297 aaKnown RBP8.18□□□□□ -1.1
SHQ1-207ENST00000475558 STOX1Q6ZVD7 989 aa8.18□□□□□ -1.1
SHQ1-207ENST00000475558 MIGA2Q7L4E1 593 aa8.18□□□□□ -1.1
SHQ1-207ENST00000475558 MAPKAPK5Q8IW41 473 aa8.18□□□□□ -1.1
SHQ1-207ENST00000475558 FAM177A1Q8N128 213 aaPredicted RBP8.18□□□□□ -1.1
SHQ1-207ENST00000475558 CRACR2BQ8N4Y2 399 aaPredicted RBP8.18□□□□□ -1.1
SHQ1-207ENST00000475558 NEDD1Q8NHV4 660 aa8.18□□□□□ -1.1
SHQ1-207ENST00000475558 U2AF1L4Q8WU68 220 aaKnown RBP8.18□□□□□ -1.1
SHQ1-207ENST00000475558 BRF1Q92994 677 aa8.18□□□□□ -1.1
SHQ1-207ENST00000475558 PARK7Q99497 189 aaKnown RBP8.18□□□□□ -1.1
SHQ1-207ENST00000475558 CABP5Q9NP86 173 aa8.18□□□□□ -1.1
SHQ1-207ENST00000475558 RBM28Q9NW13 759 aaKnown RBP8.18□□□□□ -1.1
SHQ1-207ENST00000475558 ZNF112Q9UJU3 913 aa8.18□□□□□ -1.1
SHQ1-207ENST00000475558 TPCN1Q9ULQ1 816 aa8.18□□□□□ -1.1
SHQ1-207ENST00000475558 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.18□□□□□ -1.1
SHQ1-207ENST00000475558 AK9Q5TCS8 1911 aa8.18□□□□□ -1.1
SHQ1-207ENST00000475558 FLT1P17948 1338 aa8.18□□□□□ -1.1
SHQ1-207ENST00000475558 RANBP2P49792 3224 aaKnown RBP8.18□□□□□ -1.1
SHQ1-207ENST00000475558 SH2B2O14492 632 aaPredicted RBP8.17□□□□□ -1.1
SHQ1-207ENST00000475558 ZBTB43O43298 467 aa8.17□□□□□ -1.1
SHQ1-207ENST00000475558 EVI5O60447 810 aa8.17□□□□□ -1.1
SHQ1-207ENST00000475558 TFAP4Q01664 338 aa8.17□□□□□ -1.1
SHQ1-207ENST00000475558 GABPAQ06546 454 aa8.17□□□□□ -1.1
SHQ1-207ENST00000475558 TOB2Q14106 344 aaPredicted RBP8.17□□□□□ -1.1
SHQ1-207ENST00000475558 ME3Q16798 604 aa8.17□□□□□ -1.1
SHQ1-207ENST00000475558 NOL9Q5SY16 702 aaKnown RBP8.17□□□□□ -1.1
SHQ1-207ENST00000475558 IFIT1BQ5T764 474 aaKnown RBP8.17□□□□□ -1.1
SHQ1-207ENST00000475558 RCSD1Q6JBY9 416 aa8.17□□□□□ -1.1
SHQ1-207ENST00000475558 TBC1D10CQ8IV04 446 aa8.17□□□□□ -1.1
SHQ1-207ENST00000475558 ZSCAN29Q8IWY8 852 aaPredicted RBP8.17□□□□□ -1.1
SHQ1-207ENST00000475558 PLA2G2EQ9NZK7 142 aa8.17□□□□□ -1.1
SHQ1-207ENST00000475558 HCSTQ9UBK5 93 aa8.17□□□□□ -1.1
SHQ1-207ENST00000475558 ADGRA2Q96PE1 1338 aa8.17□□□□□ -1.1
SHQ1-207ENST00000475558 ADCY3O60266 1144 aa8.16□□□□□ -1.1
SHQ1-207ENST00000475558 DDAH1O94760 285 aa8.16□□□□□ -1.1
SHQ1-207ENST00000475558 TFRCP02786 760 aaKnown RBP8.16□□□□□ -1.1
SHQ1-207ENST00000475558 BCRP11274 1271 aa8.16□□□□□ -1.1
SHQ1-207ENST00000475558 XBP1P17861 261 aa8.16□□□□□ -1.1
SHQ1-207ENST00000475558 PLCD1P51178 756 aa8.16□□□□□ -1.1
SHQ1-207ENST00000475558 AKAP17AQ02040 695 aaKnown RBP8.16□□□□□ -1.1
SHQ1-207ENST00000475558 MAP3K10Q02779 954 aa8.16□□□□□ -1.1
SHQ1-207ENST00000475558 PRKCZQ05513 592 aa8.16□□□□□ -1.1
SHQ1-207ENST00000475558 TRAF1Q13077 416 aa8.16□□□□□ -1.1
SHQ1-207ENST00000475558 PICALMQ13492 652 aa8.16□□□□□ -1.1
SHQ1-207ENST00000475558 MOGSQ13724 837 aa8.16□□□□□ -1.1
SHQ1-207ENST00000475558 CERKLQ49MI3 558 aaPredicted RBP8.16□□□□□ -1.1
SHQ1-207ENST00000475558 LARP1BQ659C4 914 aaKnown RBP8.16□□□□□ -1.1
SHQ1-207ENST00000475558 POTEEQ6S8J3 1075 aa8.16□□□□□ -1.1
SHQ1-207ENST00000475558 FASTKD5Q7L8L6 764 aaKnown RBP8.16□□□□□ -1.1
SHQ1-207ENST00000475558 TRIM22Q8IYM9 498 aa8.16□□□□□ -1.1
SHQ1-207ENST00000475558 FAM184AQ8NB25 1140 aa8.16□□□□□ -1.1
SHQ1-207ENST00000475558 FANCBQ8NB91 859 aa8.16□□□□□ -1.1
SHQ1-207ENST00000475558 PXYLP1Q8TE99 480 aa8.16□□□□□ -1.1
SHQ1-207ENST00000475558 GTF3C6Q969F1 213 aa8.16□□□□□ -1.1
SHQ1-207ENST00000475558 ROBO3Q96MS0 1386 aa8.16□□□□□ -1.1
SHQ1-207ENST00000475558 ANP32EQ9BTT0 268 aa8.16□□□□□ -1.1
SHQ1-207ENST00000475558 UNC93B1Q9H1C4 597 aa8.16□□□□□ -1.1
SHQ1-207ENST00000475558 KAT14Q9H8E8 782 aa8.16□□□□□ -1.1
SHQ1-207ENST00000475558 KANSL2Q9H9L4 492 aa8.16□□□□□ -1.1
SHQ1-207ENST00000475558 MGAMO43451 1857 aa8.15□□□□□ -1.1
SHQ1-207ENST00000475558 COL2A1P02458 1487 aaPredicted RBP8.15□□□□□ -1.1
SHQ1-207ENST00000475558 ATRNL1Q5VV63 1379 aa8.15□□□□□ -1.1
SHQ1-207ENST00000475558 KLF18A0A0U1RQI7 1052 aa8.15□□□□□ -1.1
SHQ1-207ENST00000475558 GOLGA6L22H0YM25 854 aa8.15□□□□□ -1.1
SHQ1-207ENST00000475558 CYP2C8P10632 490 aa8.15□□□□□ -1.1
SHQ1-207ENST00000475558 TOP1P11387 765 aaKnown RBP8.15□□□□□ -1.1
SHQ1-207ENST00000475558 NOVP48745 357 aa8.15□□□□□ -1.1
SHQ1-207ENST00000475558 SLC4A3P48751 1232 aa8.15□□□□□ -1.1
SHQ1-207ENST00000475558 FLT3LGP49771 235 aa8.15□□□□□ -1.1
SHQ1-207ENST00000475558 METAP2P50579 478 aaKnown RBP eCLIP8.15□□□□□ -1.1
SHQ1-207ENST00000475558 TCP10Q12799 353 aa8.15□□□□□ -1.1
SHQ1-207ENST00000475558 IRF5Q13568 498 aa8.15□□□□□ -1.1
SHQ1-207ENST00000475558 GPAT2Q6NUI2 795 aa8.15□□□□□ -1.1
SHQ1-207ENST00000475558 TATDN1Q6P1N9 297 aa8.15□□□□□ -1.1
SHQ1-207ENST00000475558 ADGRD1Q6QNK2 874 aa8.15□□□□□ -1.1
SHQ1-207ENST00000475558 CYB5R4Q7L1T6 521 aa8.15□□□□□ -1.1
SHQ1-207ENST00000475558 TEX2Q8IWB9 1127 aa8.15□□□□□ -1.1
SHQ1-207ENST00000475558 CTCFLQ8NI51 663 aaPredicted RBP8.15□□□□□ -1.1
SHQ1-207ENST00000475558 MKL1Q969V6 931 aa8.15□□□□□ -1.1
SHQ1-207ENST00000475558 GBP4Q96PP9 640 aa8.15□□□□□ -1.1
SHQ1-207ENST00000475558 NBPF3Q9H094 633 aa8.15□□□□□ -1.1
SHQ1-207ENST00000475558 SH2D4AQ9H788 454 aa8.15□□□□□ -1.1
SHQ1-207ENST00000475558 LY9Q9HBG7 655 aa8.15□□□□□ -1.1
SHQ1-207ENST00000475558 FAM198AQ9UFP1 575 aa8.15□□□□□ -1.1
SHQ1-207ENST00000475558 NAP1L2Q9ULW6 460 aaPredicted RBP8.15□□□□□ -1.1
SHQ1-207ENST00000475558 GABRQQ9UN88 632 aa8.15□□□□□ -1.1
SHQ1-207ENST00000475558 SLC45A1Q9Y2W3 748 aa8.15□□□□□ -1.1
SHQ1-207ENST00000475558 CUL9Q8IWT3 2517 aa8.14□□□□□ -1.11
SHQ1-207ENST00000475558 TNKSO95271 1327 aa8.14□□□□□ -1.11
SHQ1-207ENST00000475558 ARHGAP33O14559 1287 aa8.14□□□□□ -1.11
SHQ1-207ENST00000475558 TNPO2O14787 897 aaKnown RBP8.14□□□□□ -1.11
SHQ1-207ENST00000475558 CD2BP2O95400 341 aaKnown RBP8.14□□□□□ -1.11
SHQ1-207ENST00000475558 TTLL1O95922 423 aa8.14□□□□□ -1.11
SHQ1-207ENST00000475558 INHAP05111 366 aa8.14□□□□□ -1.11
SHQ1-207ENST00000475558 CPA1P15085 419 aa8.14□□□□□ -1.11
SHQ1-207ENST00000475558 IFNAR1P17181 557 aa8.14□□□□□ -1.11
SHQ1-207ENST00000475558 RASA1P20936 1047 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms