RNA–Protein interactions for RNA: ENST00000474961.5

DDX39B-217, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-217ENST00000474961 TSR1Q2NL82 804 aaKnown RBP11.1□□□□□ -0.63
DDX39B-217ENST00000474961 LDLRAD1Q5T700 205 aa11.1□□□□□ -0.63
DDX39B-217ENST00000474961 CST9Q5W186 159 aa11.1□□□□□ -0.63
DDX39B-217ENST00000474961 ADGRD1Q6QNK2 874 aa11.1□□□□□ -0.63
DDX39B-217ENST00000474961 CCDC83Q8IWF9 413 aa11.1□□□□□ -0.63
DDX39B-217ENST00000474961 CCDC144CPQ8IYA2 1237 aa11.1□□□□□ -0.63
DDX39B-217ENST00000474961 ANKRD13AQ8IZ07 590 aa11.1□□□□□ -0.63
DDX39B-217ENST00000474961 C2orf69Q8N8R5 385 aa11.1□□□□□ -0.63
DDX39B-217ENST00000474961 FANCBQ8NB91 859 aa11.1□□□□□ -0.63
DDX39B-217ENST00000474961 SMC1BQ8NDV3 1235 aa11.1□□□□□ -0.63
DDX39B-217ENST00000474961 RBM46Q8TBY0 533 aaKnown RBP11.1□□□□□ -0.63
DDX39B-217ENST00000474961 GTF3C6Q969F1 213 aa11.1□□□□□ -0.63
DDX39B-217ENST00000474961 CHMP4CQ96CF2 233 aa11.1□□□□□ -0.63
DDX39B-217ENST00000474961 CLMNQ96JQ2 1002 aa11.1□□□□□ -0.63
DDX39B-217ENST00000474961 WDR18Q9BV38 432 aa11.1□□□□□ -0.63
DDX39B-217ENST00000474961 NCOA5Q9HCD5 579 aaKnown RBP11.1□□□□□ -0.63
DDX39B-217ENST00000474961 MTMR7Q9Y216 660 aa11.1□□□□□ -0.63
DDX39B-217ENST00000474961 NID2Q14112 1375 aa11.09□□□□□ -0.63
DDX39B-217ENST00000474961 F5H6K3 240 aa11.09□□□□□ -0.63
DDX39B-217ENST00000474961 TOMM70O94826 608 aa11.09□□□□□ -0.63
DDX39B-217ENST00000474961 FKBP1BP68106 108 aa11.09□□□□□ -0.63
DDX39B-217ENST00000474961 KLRC3Q07444 240 aa11.09□□□□□ -0.63
DDX39B-217ENST00000474961 GRM4Q14833 912 aa11.09□□□□□ -0.63
DDX39B-217ENST00000474961 RTN1Q16799 776 aa11.09□□□□□ -0.63
DDX39B-217ENST00000474961 IPO9Q96P70 1041 aaKnown RBP11.09□□□□□ -0.63
DDX39B-217ENST00000474961 MAP3K14Q99558 947 aa11.09□□□□□ -0.63
DDX39B-217ENST00000474961 ELP3Q9H9T3 547 aa11.09□□□□□ -0.63
DDX39B-217ENST00000474961 AS3MTQ9HBK9 375 aa11.09□□□□□ -0.63
DDX39B-217ENST00000474961 FAM217BQ9NTX9 383 aaPredicted RBP11.09□□□□□ -0.63
DDX39B-217ENST00000474961 SYNPO2Q9UMS6 1093 aa11.09□□□□□ -0.63
DDX39B-217ENST00000474961 TMX2Q9Y320 296 aa11.09□□□□□ -0.63
DDX39B-217ENST00000474961 ZHX2Q9Y6X8 837 aa11.09□□□□□ -0.63
DDX39B-217ENST00000474961 PASKQ96RG2 1323 aa11.09□□□□□ -0.63
DDX39B-217ENST00000474961 UNCXA6NJT0 531 aa11.08□□□□□ -0.64
DDX39B-217ENST00000474961 PDHBP11177 359 aa11.08□□□□□ -0.64
DDX39B-217ENST00000474961 CDC27P30260 824 aa11.08□□□□□ -0.64
DDX39B-217ENST00000474961 ADD1P35611 737 aaKnown RBP11.08□□□□□ -0.64
DDX39B-217ENST00000474961 SPP2Q13103 211 aa11.08□□□□□ -0.64
DDX39B-217ENST00000474961 PPP2R5BQ15173 497 aa11.08□□□□□ -0.64
DDX39B-217ENST00000474961 SLFN13Q68D06 897 aa11.08□□□□□ -0.64
DDX39B-217ENST00000474961 RASGRP2Q7LDG7 609 aa11.08□□□□□ -0.64
DDX39B-217ENST00000474961 ZNF280CQ8ND82 737 aa11.08□□□□□ -0.64
DDX39B-217ENST00000474961 GMCL1P1Q8NEA9 526 aa11.08□□□□□ -0.64
DDX39B-217ENST00000474961 CTCFLQ8NI51 663 aaPredicted RBP11.08□□□□□ -0.64
DDX39B-217ENST00000474961 SLC10A4Q96EP9 437 aa11.08□□□□□ -0.64
DDX39B-217ENST00000474961 FEZ1Q99689 392 aa11.08□□□□□ -0.64
DDX39B-217ENST00000474961 ZBED2Q9BTP6 218 aa11.08□□□□□ -0.64
DDX39B-217ENST00000474961 SH2D4AQ9H788 454 aa11.08□□□□□ -0.64
DDX39B-217ENST00000474961 VCPKMTQ9H867 229 aa11.08□□□□□ -0.64
DDX39B-217ENST00000474961 GOPCQ9HD26 462 aa11.08□□□□□ -0.64
DDX39B-217ENST00000474961 DAXXQ9UER7 740 aaPredicted RBP11.08□□□□□ -0.64
DDX39B-217ENST00000474961 AFG3L2Q9Y4W6 797 aa11.08□□□□□ -0.64
DDX39B-217ENST00000474961 CCDC196A0A1B0GTZ2 297 aa11.07□□□□□ -0.64
DDX39B-217ENST00000474961 PALM3A6NDB9 673 aaPredicted RBP11.07□□□□□ -0.64
DDX39B-217ENST00000474961 USP17L10C9JJH3 530 aa11.07□□□□□ -0.64
DDX39B-217ENST00000474961 RAD21O60216 631 aa11.07□□□□□ -0.64
DDX39B-217ENST00000474961 DHX16O60231 1041 aaKnown RBP11.07□□□□□ -0.64
DDX39B-217ENST00000474961 DTNBO60941 627 aa11.07□□□□□ -0.64
DDX39B-217ENST00000474961 NDUFB10O96000 172 aa11.07□□□□□ -0.64
DDX39B-217ENST00000474961 HSP90AA1P07900 732 aaKnown RBP11.07□□□□□ -0.64
DDX39B-217ENST00000474961 PARP1P09874 1014 aaKnown RBP11.07□□□□□ -0.64
DDX39B-217ENST00000474961 SNHG28P0DPA3 235 aa11.07□□□□□ -0.64
DDX39B-217ENST00000474961 COL9A1P20849 921 aa11.07□□□□□ -0.64
DDX39B-217ENST00000474961 KIF5BP33176 963 aa11.07□□□□□ -0.64
DDX39B-217ENST00000474961 ZYXQ15942 572 aaKnown RBP11.07□□□□□ -0.64
DDX39B-217ENST00000474961 KIAA1755Q5JYT7 1200 aa11.07□□□□□ -0.64
DDX39B-217ENST00000474961 USP17L2Q6R6M4 530 aa11.07□□□□□ -0.64
DDX39B-217ENST00000474961 ERO1BQ86YB8 467 aa11.07□□□□□ -0.64
DDX39B-217ENST00000474961 STAG2Q8N3U4 1231 aa11.07□□□□□ -0.64
DDX39B-217ENST00000474961 DCAF4Q8WV16 495 aa11.07□□□□□ -0.64
DDX39B-217ENST00000474961 INTS4Q96HW7 963 aaKnown RBP11.07□□□□□ -0.64
DDX39B-217ENST00000474961 KIAA1683Q9H0B3 1180 aa11.07□□□□□ -0.64
DDX39B-217ENST00000474961 RBM28Q9NW13 759 aaKnown RBP11.07□□□□□ -0.64
DDX39B-217ENST00000474961 MAD2L2Q9UI95 211 aa11.07□□□□□ -0.64
DDX39B-217ENST00000474961 VPS9D1Q9Y2B5 631 aa11.07□□□□□ -0.64
DDX39B-217ENST00000474961 SPDYE5A6NIY4 337 aa11.06□□□□□ -0.64
DDX39B-217ENST00000474961 TRIM75PA6NK02 468 aa11.06□□□□□ -0.64
DDX39B-217ENST00000474961 CPLX1O14810 134 aa11.06□□□□□ -0.64
DDX39B-217ENST00000474961 PLEKHA8P1O95397 391 aa11.06□□□□□ -0.64
DDX39B-217ENST00000474961 CTDNEP1O95476 244 aa11.06□□□□□ -0.64
DDX39B-217ENST00000474961 GOLGA8HP0CJ92 632 aa11.06□□□□□ -0.64
DDX39B-217ENST00000474961 GNAQP50148 359 aa11.06□□□□□ -0.64
DDX39B-217ENST00000474961 BACE1P56817 501 aa11.06□□□□□ -0.64
DDX39B-217ENST00000474961 PPATQ06203 517 aa11.06□□□□□ -0.64
DDX39B-217ENST00000474961 ZNF543Q08ER8 600 aa11.06□□□□□ -0.64
DDX39B-217ENST00000474961 FSTL1Q12841 308 aa11.06□□□□□ -0.64
DDX39B-217ENST00000474961 MTMR2Q13614 643 aa11.06□□□□□ -0.64
DDX39B-217ENST00000474961 NTRK3Q16288 839 aa11.06□□□□□ -0.64
DDX39B-217ENST00000474961 CCDC96Q2M329 555 aa11.06□□□□□ -0.64
DDX39B-217ENST00000474961 ASPRV1Q53RT3 343 aa11.06□□□□□ -0.64
DDX39B-217ENST00000474961 CPLX2Q6PUV4 134 aaKnown RBP11.06□□□□□ -0.64
DDX39B-217ENST00000474961 TMTC3Q6ZXV5 915 aa11.06□□□□□ -0.64
DDX39B-217ENST00000474961 SPNS2Q8IVW8 549 aa11.06□□□□□ -0.64
DDX39B-217ENST00000474961 SPICE1Q8N0Z3 855 aa11.06□□□□□ -0.64
DDX39B-217ENST00000474961 CMTR1Q8N1G2 835 aaKnown RBP11.06□□□□□ -0.64
DDX39B-217ENST00000474961 NSUN7Q8NE18 718 aaKnown RBP11.06□□□□□ -0.64
DDX39B-217ENST00000474961 OPTNQ96CV9 577 aa11.06□□□□□ -0.64
DDX39B-217ENST00000474961 GMCL1Q96IK5 515 aa11.06□□□□□ -0.64
DDX39B-217ENST00000474961 NUP88Q99567 741 aaPredicted RBP11.06□□□□□ -0.64
DDX39B-217ENST00000474961 LLPHQ9BRT6 129 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms