RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 FAM205CA6NFA0 338 aa22.68■■□□□ 1.22
SSR1-204ENST00000474597 F5H6K3 240 aa22.68■■□□□ 1.22
SSR1-204ENST00000474597 GNA11P29992 359 aa22.68■■□□□ 1.22
SSR1-204ENST00000474597 JAG1P78504 1218 aa22.68■■□□□ 1.22
SSR1-204ENST00000474597 KLRC3Q07444 240 aa22.68■■□□□ 1.22
SSR1-204ENST00000474597 CAMK4Q16566 473 aa22.68■■□□□ 1.22
SSR1-204ENST00000474597 MAP3K11Q16584 847 aa22.68■■□□□ 1.22
SSR1-204ENST00000474597 TYW1BQ6NUM6 668 aa22.68■■□□□ 1.22
SSR1-204ENST00000474597 PIK3AP1Q6ZUJ8 805 aa22.68■■□□□ 1.22
SSR1-204ENST00000474597 DAGLBQ8NCG7 672 aa22.68■■□□□ 1.22
SSR1-204ENST00000474597 CLSTN2Q9H4D0 955 aa22.68■■□□□ 1.22
SSR1-204ENST00000474597 C6orf50Q9HD87 102 aa22.68■■□□□ 1.22
SSR1-204ENST00000474597 PGAP2Q9UHJ9 254 aa22.68■■□□□ 1.22
SSR1-204ENST00000474597 KINO60870 393 aaKnown RBP22.68■■□□□ 1.22
SSR1-204ENST00000474597 EARS2Q5JPH6 523 aaKnown RBP22.68■■□□□ 1.22
SSR1-204ENST00000474597 ZMYND12Q9H0C1 365 aa22.68■■□□□ 1.22
SSR1-204ENST00000474597 PNMA6FA0A0J9YX94 578 aa22.67■■□□□ 1.22
SSR1-204ENST00000474597 CCDC194A0A1B0GVG4 234 aa22.67■■□□□ 1.22
SSR1-204ENST00000474597 CUTAO60888 179 aa22.67■■□□□ 1.22
SSR1-204ENST00000474597 BMP15O95972 392 aa22.67■■□□□ 1.22
SSR1-204ENST00000474597 SLC16A2P36021 539 aa22.67■■□□□ 1.22
SSR1-204ENST00000474597 TRAPPC10P48553 1259 aa22.67■■□□□ 1.22
SSR1-204ENST00000474597 AXDND1Q5T1B0 1012 aaPredicted RBP22.67■■□□□ 1.22
SSR1-204ENST00000474597 KRI1Q8N9T8 703 aaKnown RBP22.67■■□□□ 1.22
SSR1-204ENST00000474597 GMCL1Q96IK5 515 aa22.67■■□□□ 1.22
SSR1-204ENST00000474597 GPRC5DQ9NZD1 345 aa22.67■■□□□ 1.22
SSR1-204ENST00000474597 A0A1B0GVL5 298 aa22.66■■□□□ 1.22
SSR1-204ENST00000474597 SMCO2A6NFE2 343 aa22.66■■□□□ 1.22
SSR1-204ENST00000474597 CMA1P23946 247 aa22.66■■□□□ 1.22
SSR1-204ENST00000474597 CAP2P40123 477 aa22.66■■□□□ 1.22
SSR1-204ENST00000474597 JMJD4Q9H9V9 463 aa22.66■■□□□ 1.22
SSR1-204ENST00000474597 NDUFB10O96000 172 aa22.66■■□□□ 1.22
SSR1-204ENST00000474597 MAP3K10Q02779 954 aa22.66■■□□□ 1.22
SSR1-204ENST00000474597 TTC38Q5R3I4 469 aa22.66■■□□□ 1.22
SSR1-204ENST00000474597 GOPCQ9HD26 462 aa22.66■■□□□ 1.22
SSR1-204ENST00000474597 RNF181Q9P0P0 153 aa22.66■■□□□ 1.22
SSR1-204ENST00000474597 ASTN2O75129 1339 aaPredicted RBP22.66■■□□□ 1.22
SSR1-204ENST00000474597 ATAD5Q96QE3 1844 aa22.65■■□□□ 1.22
SSR1-204ENST00000474597 IKQ13123 557 aaPredicted RBP22.65■■□□□ 1.22
SSR1-204ENST00000474597 NOM1Q5C9Z4 860 aaKnown RBP22.65■■□□□ 1.22
SSR1-204ENST00000474597 APOBEC3FQ8IUX4 373 aaKnown RBP22.65■■□□□ 1.22
SSR1-204ENST00000474597 DEFB129Q9H1M3 183 aa22.65■■□□□ 1.22
SSR1-204ENST00000474597 SH2D4AQ9H788 454 aa22.65■■□□□ 1.22
SSR1-204ENST00000474597 ZBTB5O15062 677 aa22.64■■□□□ 1.22
SSR1-204ENST00000474597 CTAGE5O15320 804 aa22.64■■□□□ 1.22
SSR1-204ENST00000474597 ASNSP08243 561 aa22.64■■□□□ 1.22
SSR1-204ENST00000474597 NDUFA8P51970 172 aa22.64■■□□□ 1.22
SSR1-204ENST00000474597 SNW1Q13573 536 aaKnown RBP22.64■■□□□ 1.22
SSR1-204ENST00000474597 ENGASEQ8NFI3 743 aa22.64■■□□□ 1.22
SSR1-204ENST00000474597 TEPSINQ96N21 525 aa22.64■■□□□ 1.22
SSR1-204ENST00000474597 PCDHA6Q9UN73 950 aa22.64■■□□□ 1.22
SSR1-204ENST00000474597 PCDHA8Q9Y5H6 950 aa22.64■■□□□ 1.22
SSR1-204ENST00000474597 A0A1W2PRG0 241 aa22.64■■□□□ 1.21
SSR1-204ENST00000474597 ESYT2A0FGR8 921 aa22.64■■□□□ 1.21
SSR1-204ENST00000474597 USP17L10C9JJH3 530 aa22.64■■□□□ 1.21
SSR1-204ENST00000474597 BMP3P12645 472 aa22.64■■□□□ 1.21
SSR1-204ENST00000474597 ZNF174Q15697 407 aa22.64■■□□□ 1.21
SSR1-204ENST00000474597 RASGRP4Q8TDF6 673 aa22.64■■□□□ 1.21
SSR1-204ENST00000474597 COA7Q96BR5 231 aa22.64■■□□□ 1.21
SSR1-204ENST00000474597 TMX2Q9Y320 296 aa22.64■■□□□ 1.21
SSR1-204ENST00000474597 M0R2N6 131 aa22.63■■□□□ 1.21
SSR1-204ENST00000474597 XRCC6P12956 609 aaKnown RBP eCLIP22.63■■□□□ 1.21
SSR1-204ENST00000474597 ECE1P42892 770 aa22.63■■□□□ 1.21
SSR1-204ENST00000474597 ANGEL2Q5VTE6 544 aaKnown RBP22.63■■□□□ 1.21
SSR1-204ENST00000474597 PPP1R18Q6NYC8 613 aa22.63■■□□□ 1.21
SSR1-204ENST00000474597 FMR1NBQ8N0W7 255 aaPredicted RBP22.63■■□□□ 1.21
SSR1-204ENST00000474597 CLIC6Q96NY7 704 aa22.63■■□□□ 1.21
SSR1-204ENST00000474597 ADAMTS3O15072 1205 aa22.62■■□□□ 1.21
SSR1-204ENST00000474597 CCDC192P0DO97 292 aa22.62■■□□□ 1.21
SSR1-204ENST00000474597 PFKFB1P16118 471 aa22.62■■□□□ 1.21
SSR1-204ENST00000474597 PTPREP23469 700 aa22.62■■□□□ 1.21
SSR1-204ENST00000474597 KRT25Q7Z3Z0 450 aa22.62■■□□□ 1.21
SSR1-204ENST00000474597 CKAP2LQ8IYA6 745 aa22.62■■□□□ 1.21
SSR1-204ENST00000474597 TRPM4Q8TD43 1214 aa22.62■■□□□ 1.21
SSR1-204ENST00000474597 HOOK2Q96ED9 719 aa22.62■■□□□ 1.21
SSR1-204ENST00000474597 NUP88Q99567 741 aaPredicted RBP22.62■■□□□ 1.21
SSR1-204ENST00000474597 RBSNQ9H1K0 784 aa22.62■■□□□ 1.21
SSR1-204ENST00000474597 SRPRBQ9Y5M8 271 aaKnown RBP22.62■■□□□ 1.21
SSR1-204ENST00000474597 MORC2Q9Y6X9 1032 aaPredicted RBP22.62■■□□□ 1.21
SSR1-204ENST00000474597 YBX3P16989 372 aaKnown RBP eCLIP22.61■■□□□ 1.212e-9■□□□□ 9.8
SSR1-204ENST00000474597 LMOD1P29536 600 aaPredicted RBP22.61■■□□□ 1.21
SSR1-204ENST00000474597 ADCY7P51828 1080 aa22.61■■□□□ 1.21
SSR1-204ENST00000474597 DCAF15Q66K64 600 aa22.61■■□□□ 1.21
SSR1-204ENST00000474597 ACER1Q8TDN7 264 aa22.61■■□□□ 1.21
SSR1-204ENST00000474597 MTMR8Q96EF0 704 aa22.61■■□□□ 1.21
SSR1-204ENST00000474597 FBXO2Q9UK22 296 aaPredicted RBP22.61■■□□□ 1.21
SSR1-204ENST00000474597 TMEM232C9JQI7 657 aa22.61■■□□□ 1.21
SSR1-204ENST00000474597 EPS15P42566 896 aa22.61■■□□□ 1.21
SSR1-204ENST00000474597 RESP18Q5W5W9 173 aa22.61■■□□□ 1.21
SSR1-204ENST00000474597 SHC4Q6S5L8 630 aa22.61■■□□□ 1.21
SSR1-204ENST00000474597 SPICE1Q8N0Z3 855 aa22.61■■□□□ 1.21
SSR1-204ENST00000474597 FAM13BQ9NYF5 915 aa22.61■■□□□ 1.21
SSR1-204ENST00000474597 MCM7P33993 719 aa22.6■■□□□ 1.21
SSR1-204ENST00000474597 SYKP43405 635 aa22.6■■□□□ 1.21
SSR1-204ENST00000474597 CDC37Q16543 378 aaPredicted RBP22.6■■□□□ 1.21
SSR1-204ENST00000474597 SYDE2Q5VT97 1194 aa22.6■■□□□ 1.21
SSR1-204ENST00000474597 ILDR2Q71H61 639 aa22.6■■□□□ 1.21
SSR1-204ENST00000474597 REXO1Q8N1G1 1221 aaKnown RBP22.6■■□□□ 1.21
SSR1-204ENST00000474597 SDF4Q9BRK5 362 aa22.6■■□□□ 1.21
SSR1-204ENST00000474597 PHF20L1A8MW92 1017 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms