RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 SNX14Q9Y5W7 946 aa6.98□□□□□ -1.29
ATPAF1-204ENST00000474020 CCDC171Q6TFL3 1326 aa6.98□□□□□ -1.29
ATPAF1-204ENST00000474020 PRAMEF22A3QJZ6 481 aa6.97□□□□□ -1.29
ATPAF1-204ENST00000474020 A6NHS1 94 aa6.97□□□□□ -1.29
ATPAF1-204ENST00000474020 BRD1O95696 1058 aa6.97□□□□□ -1.29
ATPAF1-204ENST00000474020 STARD3NLO95772 234 aa6.97□□□□□ -1.29
ATPAF1-204ENST00000474020 IGKV5-2P06315 115 aa6.97□□□□□ -1.29
ATPAF1-204ENST00000474020 CES1P23141 567 aa6.97□□□□□ -1.29
ATPAF1-204ENST00000474020 IL15P40933 162 aaPredicted RBP6.97□□□□□ -1.29
ATPAF1-204ENST00000474020 CCDC173Q0VFZ6 552 aa6.97□□□□□ -1.29
ATPAF1-204ENST00000474020 RABL6Q3YEC7 729 aaPredicted RBP6.97□□□□□ -1.29
ATPAF1-204ENST00000474020 ZMYM1Q5SVZ6 1142 aa6.97□□□□□ -1.29
ATPAF1-204ENST00000474020 PRPF40BQ6NWY9 871 aaKnown RBP6.97□□□□□ -1.29
ATPAF1-204ENST00000474020 UNC5CLQ8IV45 518 aa6.97□□□□□ -1.29
ATPAF1-204ENST00000474020 ZGPATQ8N5A5 531 aaKnown RBP6.97□□□□□ -1.29
ATPAF1-204ENST00000474020 CCDC191Q8NCU4 936 aa6.97□□□□□ -1.29
ATPAF1-204ENST00000474020 PMEPA1Q969W9 287 aa6.97□□□□□ -1.29
ATPAF1-204ENST00000474020 UPF3BQ9BZI7 483 aaKnown RBP6.97□□□□□ -1.29
ATPAF1-204ENST00000474020 LACRTQ9GZZ8 138 aa6.97□□□□□ -1.29
ATPAF1-204ENST00000474020 CCDC8Q9H0W5 538 aaPredicted RBP6.97□□□□□ -1.29
ATPAF1-204ENST00000474020 PALD1Q9ULE6 856 aa6.97□□□□□ -1.29
ATPAF1-204ENST00000474020 AKAP2Q9Y2D5 859 aa6.97□□□□□ -1.29
ATPAF1-204ENST00000474020 KIF3AQ9Y496 699 aa6.97□□□□□ -1.29
ATPAF1-204ENST00000474020 AK9Q5TCS8 1911 aa6.97□□□□□ -1.29
ATPAF1-204ENST00000474020 LAMB4A4D0S4 1761 aa6.97□□□□□ -1.29
ATPAF1-204ENST00000474020 COL18A1P39060 1754 aa6.97□□□□□ -1.29
ATPAF1-204ENST00000474020 RGPD5Q99666 1765 aa6.96□□□□□ -1.3
ATPAF1-204ENST00000474020 LINC01387J3KSC0 135 aa6.96□□□□□ -1.3
ATPAF1-204ENST00000474020 PRPF40AO75400 957 aaKnown RBP6.96□□□□□ -1.3
ATPAF1-204ENST00000474020 LETM1O95202 739 aaPredicted RBP6.96□□□□□ -1.3
ATPAF1-204ENST00000474020 HMGB1P09429 215 aaKnown RBP6.96□□□□□ -1.3
ATPAF1-204ENST00000474020 XRCC6P12956 609 aaKnown RBP eCLIP6.96□□□□□ -1.3
ATPAF1-204ENST00000474020 ATP5JP18859 108 aa6.96□□□□□ -1.3
ATPAF1-204ENST00000474020 USP5P45974 858 aa6.96□□□□□ -1.3
ATPAF1-204ENST00000474020 NASPP49321 788 aaPredicted RBP6.96□□□□□ -1.3
ATPAF1-204ENST00000474020 PIP4K2BP78356 416 aa6.96□□□□□ -1.3
ATPAF1-204ENST00000474020 EHHADHQ08426 723 aa6.96□□□□□ -1.3
ATPAF1-204ENST00000474020 HSP90AB3PQ58FF7 597 aa6.96□□□□□ -1.3
ATPAF1-204ENST00000474020 TNNI3KQ59H18 835 aa6.96□□□□□ -1.3
ATPAF1-204ENST00000474020 TAF7LQ5H9L4 462 aa6.96□□□□□ -1.3
ATPAF1-204ENST00000474020 PRSS36Q5K4E3 855 aa6.96□□□□□ -1.3
ATPAF1-204ENST00000474020 CAVIN1Q6NZI2 390 aaKnown RBP6.96□□□□□ -1.3
ATPAF1-204ENST00000474020 BLOC1S2Q6QNY1 142 aa6.96□□□□□ -1.3
ATPAF1-204ENST00000474020 ADAMTSL4Q6UY14 1074 aa6.96□□□□□ -1.3
ATPAF1-204ENST00000474020 DDX54Q8TDD1 881 aaKnown RBP6.96□□□□□ -1.3
ATPAF1-204ENST00000474020 MEGF10Q96KG7 1140 aa6.96□□□□□ -1.3
ATPAF1-204ENST00000474020 CHRDQ9H2X0 955 aa6.96□□□□□ -1.3
ATPAF1-204ENST00000474020 BOLA2Q9H3K6 86 aa6.96□□□□□ -1.3
ATPAF1-204ENST00000474020 AKTIPQ9H8T0 292 aa6.96□□□□□ -1.3
ATPAF1-204ENST00000474020 GPR108Q9NPR9 543 aa6.96□□□□□ -1.3
ATPAF1-204ENST00000474020 ATG3Q9NT62 314 aa6.96□□□□□ -1.3
ATPAF1-204ENST00000474020 RBM8AQ9Y5S9 174 aaKnown RBP6.96□□□□□ -1.3
ATPAF1-204ENST00000474020 USP16Q9Y5T5 823 aa6.96□□□□□ -1.3
ATPAF1-204ENST00000474020 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.96□□□□□ -1.3
ATPAF1-204ENST00000474020 FPGT-TNNI3KV9GXZ4 949 aa6.96□□□□□ -1.3
ATPAF1-204ENST00000474020 COL5A2P05997 1499 aaPredicted RBP6.96□□□□□ -1.3
ATPAF1-204ENST00000474020 TUBGCP6Q96RT7 1819 aa6.95□□□□□ -1.3
ATPAF1-204ENST00000474020 FAM177BA6PVY3 158 aa6.95□□□□□ -1.3
ATPAF1-204ENST00000474020 F8W735 103 aaPredicted RBP6.95□□□□□ -1.3
ATPAF1-204ENST00000474020 FZD6O60353 706 aa6.95□□□□□ -1.3
ATPAF1-204ENST00000474020 CIAO1O76071 339 aa6.95□□□□□ -1.3
ATPAF1-204ENST00000474020 SASH1O94885 1247 aa6.95□□□□□ -1.3
ATPAF1-204ENST00000474020 ABL1P00519 1130 aa6.95□□□□□ -1.3
ATPAF1-204ENST00000474020 HSP90B1P14625 803 aaKnown RBP6.95□□□□□ -1.3
ATPAF1-204ENST00000474020 PTPRAP18433 802 aa6.95□□□□□ -1.3
ATPAF1-204ENST00000474020 AK2P54819 239 aa6.95□□□□□ -1.3
ATPAF1-204ENST00000474020 ZNF445P59923 1031 aa6.95□□□□□ -1.3
ATPAF1-204ENST00000474020 FGD1P98174 961 aa6.95□□□□□ -1.3
ATPAF1-204ENST00000474020 NMIQ13287 307 aaPredicted RBP6.95□□□□□ -1.3
ATPAF1-204ENST00000474020 ZNF211Q13398 564 aaPredicted RBP6.95□□□□□ -1.3
ATPAF1-204ENST00000474020 GORABQ5T7V8 394 aa6.95□□□□□ -1.3
ATPAF1-204ENST00000474020 RUFY3Q7L099 469 aa6.95□□□□□ -1.3
ATPAF1-204ENST00000474020 GALNT11Q8NCW6 608 aa6.95□□□□□ -1.3
ATPAF1-204ENST00000474020 EAF2Q96CJ1 260 aaPredicted RBP6.95□□□□□ -1.3
ATPAF1-204ENST00000474020 POP1Q99575 1024 aaKnown RBP6.95□□□□□ -1.3
ATPAF1-204ENST00000474020 ADAM19Q9H013 955 aa6.95□□□□□ -1.3
ATPAF1-204ENST00000474020 C5P01031 1676 aa6.95□□□□□ -1.3
ATPAF1-204ENST00000474020 CRYBG1Q9Y4K1 1723 aa6.95□□□□□ -1.3
ATPAF1-204ENST00000474020 NFKBIEO00221 500 aa6.94□□□□□ -1.3
ATPAF1-204ENST00000474020 STX6O43752 255 aa6.94□□□□□ -1.3
ATPAF1-204ENST00000474020 TNFRSF21O75509 655 aa6.94□□□□□ -1.3
ATPAF1-204ENST00000474020 ZSCAN22P10073 491 aaPredicted RBP6.94□□□□□ -1.3
ATPAF1-204ENST00000474020 EPHA1P21709 976 aa6.94□□□□□ -1.3
ATPAF1-204ENST00000474020 TFCP2Q12800 502 aa6.94□□□□□ -1.3
ATPAF1-204ENST00000474020 CCDC57Q2TAC2 916 aa6.94□□□□□ -1.3
ATPAF1-204ENST00000474020 ZSCAN23Q3MJ62 389 aa6.94□□□□□ -1.3
ATPAF1-204ENST00000474020 MCMDC2Q4G0Z9 681 aa6.94□□□□□ -1.3
ATPAF1-204ENST00000474020 CCDC158Q5M9N0 1113 aa6.94□□□□□ -1.3
ATPAF1-204ENST00000474020 CREB3L3Q68CJ9 461 aa6.94□□□□□ -1.3
ATPAF1-204ENST00000474020 FAM117BQ6P1L5 589 aa6.94□□□□□ -1.3
ATPAF1-204ENST00000474020 TXNDC11Q6PKC3 985 aa6.94□□□□□ -1.3
ATPAF1-204ENST00000474020 LMBR1LQ6UX01 489 aa6.94□□□□□ -1.3
ATPAF1-204ENST00000474020 SNX29Q8TEQ0 813 aa6.94□□□□□ -1.3
ATPAF1-204ENST00000474020 MAP4K1Q92918 833 aa6.94□□□□□ -1.3
ATPAF1-204ENST00000474020 KCNB2Q92953 911 aa6.94□□□□□ -1.3
ATPAF1-204ENST00000474020 NEUROD6Q96NK8 337 aa6.94□□□□□ -1.3
ATPAF1-204ENST00000474020 DNAJC2Q99543 621 aaKnown RBP6.94□□□□□ -1.3
ATPAF1-204ENST00000474020 HAUS7Q99871 368 aa6.94□□□□□ -1.3
ATPAF1-204ENST00000474020 KRTAP4-12Q9BQ66 201 aa6.94□□□□□ -1.3
ATPAF1-204ENST00000474020 HELLSQ9NRZ9 838 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms