RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 VWA3AA6NCI4 1184 aa7.13□□□□□ -1.27
CLK1-210ENST00000473565 PPP1R11O60927 126 aaPredicted RBP7.13□□□□□ -1.27
CLK1-210ENST00000473565 ICA1Q05084 483 aa7.13□□□□□ -1.27
CLK1-210ENST00000473565 CCDC173Q0VFZ6 552 aa7.13□□□□□ -1.27
CLK1-210ENST00000473565 PNOCQ13519 176 aa7.13□□□□□ -1.27
CLK1-210ENST00000473565 JAKMIP3Q5VZ66 844 aa7.13□□□□□ -1.27
CLK1-210ENST00000473565 TATDN1Q6P1N9 297 aa7.13□□□□□ -1.27
CLK1-210ENST00000473565 SAMD7Q7Z3H4 446 aa7.13□□□□□ -1.27
CLK1-210ENST00000473565 ADGRF4Q8IZF3 695 aa7.13□□□□□ -1.27
CLK1-210ENST00000473565 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.13□□□□□ -1.27
CLK1-210ENST00000473565 SEC63Q9UGP8 760 aaKnown RBP7.13□□□□□ -1.27
CLK1-210ENST00000473565 KCNH3Q9ULD8 1083 aa7.13□□□□□ -1.27
CLK1-210ENST00000473565 HPSEQ9Y251 543 aa7.13□□□□□ -1.27
CLK1-210ENST00000473565 MYO3BQ8WXR4 1341 aa7.13□□□□□ -1.27
CLK1-210ENST00000473565 A0A087X0B3 334 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 A0A1W2PRG0 241 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 SMCO2A6NFE2 343 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 WNT10BO00744 389 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 POLR2DO15514 142 aaKnown RBP7.12□□□□□ -1.27
CLK1-210ENST00000473565 ENTPD3O75355 529 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 SNHG28P0DPA3 235 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 CDC25AP30304 524 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 ECE1P42892 770 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 NT5C2P49902 561 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 SPDYE2Q495Y8 402 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 PPP1R9BQ96SB3 815 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 JMJD4Q9H9V9 463 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 BIN2Q9UBW5 565 aaPredicted RBP7.12□□□□□ -1.27
CLK1-210ENST00000473565 NOL7Q9UMY1 257 aaKnown RBP7.12□□□□□ -1.27
CLK1-210ENST00000473565 CCDC194A0A1B0GVG4 234 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 M0R2N6 131 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 CASP1P29466 404 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 ZNF165P49910 485 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 ZYXQ15942 572 aaKnown RBP7.12□□□□□ -1.27
CLK1-210ENST00000473565 IL17AQ16552 155 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 DPCR1Q3MIW9 517 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 TBC1D10BQ4KMP7 808 aaPredicted RBP7.12□□□□□ -1.27
CLK1-210ENST00000473565 GRIPAP1Q4V328 841 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 ASPRV1Q53RT3 343 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 SOGA3Q5TF21 947 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 SLFN13Q68D06 897 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 FOXP4Q8IVH2 680 aaPredicted RBP7.12□□□□□ -1.27
CLK1-210ENST00000473565 FAM200AQ8TCP9 573 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 ACER1Q8TDN7 264 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 CCDC17Q96LX7 622 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 RIOX1Q9H6W3 641 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 MYOZ2Q9NPC6 264 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 ATRNL1Q5VV63 1379 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 SMCHD1A6NHR9 2005 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 ADCY5O95622 1261 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 PRR29P0C7W0 189 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 CALML3P27482 149 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 SLC1A4P43007 532 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 GMPSP49915 693 aaPredicted RBP7.12□□□□□ -1.27
CLK1-210ENST00000473565 UBE2SQ16763 222 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 SAMD1Q6SPF0 538 aaPredicted RBP7.12□□□□□ -1.27
CLK1-210ENST00000473565 METTL16Q86W50 562 aaKnown RBP7.12□□□□□ -1.27
CLK1-210ENST00000473565 PDLIM2Q96JY6 352 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 UIMC1Q96RL1 719 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 LZTS2Q9BRK4 669 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 TMEM60Q9H2L4 133 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 KANSL2Q9H9L4 492 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 KIAA1468Q9P260 1216 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 SERTAD1Q9UHV2 236 aa7.12□□□□□ -1.27
CLK1-210ENST00000473565 SRPRBQ9Y5M8 271 aaKnown RBP7.12□□□□□ -1.27
CLK1-210ENST00000473565 F5H6K3 240 aa7.11□□□□□ -1.27
CLK1-210ENST00000473565 CTAGE5O15320 804 aa7.11□□□□□ -1.27
CLK1-210ENST00000473565 KLRC3Q07444 240 aa7.11□□□□□ -1.27
CLK1-210ENST00000473565 KIAA1755Q5JYT7 1200 aa7.11□□□□□ -1.27
CLK1-210ENST00000473565 CNNM3Q8NE01 707 aa7.11□□□□□ -1.27
CLK1-210ENST00000473565 AGBL3Q8NEM8 1001 aa7.11□□□□□ -1.27
CLK1-210ENST00000473565 CCDC148Q8NFR7 591 aa7.11□□□□□ -1.27
CLK1-210ENST00000473565 FAM151AQ8WW52 585 aa7.11□□□□□ -1.27
CLK1-210ENST00000473565 STAMQ92783 540 aa7.11□□□□□ -1.27
CLK1-210ENST00000473565 SYMPKQ92797 1274 aaKnown RBP7.11□□□□□ -1.27
CLK1-210ENST00000473565 TRIM44Q96DX7 344 aaPredicted RBP7.11□□□□□ -1.27
CLK1-210ENST00000473565 GLIS2Q9BZE0 524 aaPredicted RBP7.11□□□□□ -1.27
CLK1-210ENST00000473565 RRAGDQ9NQL2 400 aaPredicted RBP7.11□□□□□ -1.27
CLK1-210ENST00000473565 FZD1Q9UP38 647 aa7.11□□□□□ -1.27
CLK1-210ENST00000473565 ZNF541Q9H0D2 1346 aa7.11□□□□□ -1.27
CLK1-210ENST00000473565 PP2D1A8MPX8 630 aa7.11□□□□□ -1.27
CLK1-210ENST00000473565 NPM3O75607 178 aaKnown RBP7.11□□□□□ -1.27
CLK1-210ENST00000473565 NDUFB10O96000 172 aa7.11□□□□□ -1.27
CLK1-210ENST00000473565 STX1AQ16623 288 aa7.11□□□□□ -1.27
CLK1-210ENST00000473565 PRAMEF18Q5VWM3 479 aa7.11□□□□□ -1.27
CLK1-210ENST00000473565 KRBA2Q6ZNG9 492 aa7.11□□□□□ -1.27
CLK1-210ENST00000473565 TMEM179Q6ZVK1 233 aa7.11□□□□□ -1.27
CLK1-210ENST00000473565 MICALL2Q8IY33 904 aa7.11□□□□□ -1.27
CLK1-210ENST00000473565 DHX58Q96C10 678 aa7.11□□□□□ -1.27
CLK1-210ENST00000473565 ZMYND12Q9H0C1 365 aa7.11□□□□□ -1.27
CLK1-210ENST00000473565 SH3GLB2Q9NR46 395 aa7.11□□□□□ -1.27
CLK1-210ENST00000473565 CEP131Q9UPN4 1083 aa7.11□□□□□ -1.27
CLK1-210ENST00000473565 CD2APQ9Y5K6 639 aa7.11□□□□□ -1.27
CLK1-210ENST00000473565 ATP2C1P98194 919 aaPredicted RBP7.1□□□□□ -1.27
CLK1-210ENST00000473565 IKQ13123 557 aaPredicted RBP7.1□□□□□ -1.27
CLK1-210ENST00000473565 LETM2Q2VYF4 491 aa7.1□□□□□ -1.27
CLK1-210ENST00000473565 NYAP2Q9P242 653 aa7.1□□□□□ -1.27
CLK1-210ENST00000473565 FAM237AA0A1B0GTK4 181 aa7.1□□□□□ -1.27
CLK1-210ENST00000473565 AFMP43652 599 aa7.1□□□□□ -1.27
CLK1-210ENST00000473565 DGKZQ13574 1117 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms