RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 GPRC5AQ8NFJ5 357 aa22.16■■□□□ 1.14
CTDSP1-207ENST00000473420 ZNF296Q8WUU4 475 aaPredicted RBP22.16■■□□□ 1.14
CTDSP1-207ENST00000473420 CHMP4CQ96CF2 233 aa22.16■■□□□ 1.14
CTDSP1-207ENST00000473420 ALDH8A1Q9H2A2 487 aaPredicted RBP22.16■■□□□ 1.14
CTDSP1-207ENST00000473420 PALM3A6NDB9 673 aaPredicted RBP22.15■■□□□ 1.14
CTDSP1-207ENST00000473420 LBX1P52954 281 aa22.15■■□□□ 1.14
CTDSP1-207ENST00000473420 ERVK-9P63128 1117 aa22.15■■□□□ 1.14
CTDSP1-207ENST00000473420 ERVK-24P63145 666 aa22.15■■□□□ 1.14
CTDSP1-207ENST00000473420 APOA5Q6Q788 366 aa22.15■■□□□ 1.14
CTDSP1-207ENST00000473420 SYNE3Q6ZMZ3 975 aa22.15■■□□□ 1.14
CTDSP1-207ENST00000473420 BRF1Q92994 677 aa22.15■■□□□ 1.14
CTDSP1-207ENST00000473420 KIFC2Q96AC6 838 aa22.15■■□□□ 1.14
CTDSP1-207ENST00000473420 PAGR1Q9BTK6 254 aa22.15■■□□□ 1.14
CTDSP1-207ENST00000473420 TXNRD2Q9NNW7 524 aa22.15■■□□□ 1.14
CTDSP1-207ENST00000473420 GPCPD1Q9NPB8 672 aa22.15■■□□□ 1.14
CTDSP1-207ENST00000473420 PDRG1Q9NUG6 133 aa22.15■■□□□ 1.14
CTDSP1-207ENST00000473420 BTBD7Q9P203 1132 aa22.15■■□□□ 1.14
CTDSP1-207ENST00000473420 MAD2L2Q9UI95 211 aa22.15■■□□□ 1.14
CTDSP1-207ENST00000473420 CASP8AP2Q9UKL3 1982 aa22.15■■□□□ 1.14
CTDSP1-207ENST00000473420 ZBED4O75132 1171 aa22.14■■□□□ 1.13
CTDSP1-207ENST00000473420 GOLGA8HP0CJ92 632 aa22.14■■□□□ 1.13
CTDSP1-207ENST00000473420 KIF5BP33176 963 aa22.14■■□□□ 1.13
CTDSP1-207ENST00000473420 LACTBP83111 547 aaPredicted RBP22.14■■□□□ 1.13
CTDSP1-207ENST00000473420 SYDE2Q5VT97 1194 aa22.14■■□□□ 1.13
CTDSP1-207ENST00000473420 TTBK2Q6IQ55 1244 aa22.14■■□□□ 1.13
CTDSP1-207ENST00000473420 REPS2Q8NFH8 660 aa22.14■■□□□ 1.13
CTDSP1-207ENST00000473420 CTCFLQ8NI51 663 aaPredicted RBP22.14■■□□□ 1.13
CTDSP1-207ENST00000473420 ERO1AQ96HE7 468 aa22.14■■□□□ 1.13
CTDSP1-207ENST00000473420 TBC1D32Q96NH3 1257 aa22.14■■□□□ 1.13
CTDSP1-207ENST00000473420 SLC38A10Q9HBR0 1119 aa22.14■■□□□ 1.13
CTDSP1-207ENST00000473420 PRR12Q9ULL5 1215 aa22.14■■□□□ 1.13
CTDSP1-207ENST00000473420 MYH6P13533 1939 aa22.14■■□□□ 1.13
CTDSP1-207ENST00000473420 ZSWIM8A7E2V4 1837 aa22.13■■□□□ 1.13
CTDSP1-207ENST00000473420 KLF18A0A0U1RQI7 1052 aa22.13■■□□□ 1.13
CTDSP1-207ENST00000473420 ATP2A1O14983 1001 aa22.13■■□□□ 1.13
CTDSP1-207ENST00000473420 OAZ1P54368 228 aa22.13■■□□□ 1.13
CTDSP1-207ENST00000473420 EVCP57679 992 aa22.13■■□□□ 1.13
CTDSP1-207ENST00000473420 CCNA1P78396 465 aa22.13■■□□□ 1.13
CTDSP1-207ENST00000473420 TOB2Q14106 344 aaPredicted RBP22.13■■□□□ 1.13
CTDSP1-207ENST00000473420 KIF22Q14807 665 aa22.13■■□□□ 1.13
CTDSP1-207ENST00000473420 SAMD1Q6SPF0 538 aaPredicted RBP22.13■■□□□ 1.13
CTDSP1-207ENST00000473420 NUP133Q8WUM0 1156 aa22.13■■□□□ 1.13
CTDSP1-207ENST00000473420 KIF2CQ99661 725 aa22.13■■□□□ 1.13
CTDSP1-207ENST00000473420 PRDM10Q9NQV6 1147 aa22.13■■□□□ 1.13
CTDSP1-207ENST00000473420 BRPF3Q9ULD4 1205 aa22.13■■□□□ 1.13
CTDSP1-207ENST00000473420 NID2Q14112 1375 aa22.12■■□□□ 1.13
CTDSP1-207ENST00000473420 KLRF2D3W0D1 207 aa22.12■■□□□ 1.13
CTDSP1-207ENST00000473420 SLC16A2P36021 539 aa22.12■■□□□ 1.13
CTDSP1-207ENST00000473420 TMEM132BQ14DG7 1078 aa22.12■■□□□ 1.13
CTDSP1-207ENST00000473420 STAG2Q8N3U4 1231 aa22.12■■□□□ 1.13
CTDSP1-207ENST00000473420 IL27Q8NEV9 243 aa22.12■■□□□ 1.13
CTDSP1-207ENST00000473420 MYL10Q9BUA6 226 aa22.12■■□□□ 1.13
CTDSP1-207ENST00000473420 SPATC1LQ9H0A9 340 aa22.12■■□□□ 1.13
CTDSP1-207ENST00000473420 RANBP17Q9H2T7 1088 aaKnown RBP22.12■■□□□ 1.13
CTDSP1-207ENST00000473420 ZNF214Q9UL59 606 aaPredicted RBP22.12■■□□□ 1.13
CTDSP1-207ENST00000473420 CTDP1Q9Y5B0 961 aaPredicted RBP22.12■■□□□ 1.13
CTDSP1-207ENST00000473420 ZBTB43O43298 467 aa22.11■■□□□ 1.13
CTDSP1-207ENST00000473420 GNAQP50148 359 aa22.11■■□□□ 1.13
CTDSP1-207ENST00000473420 APOBRQ0VD83 1088 aa22.11■■□□□ 1.13
CTDSP1-207ENST00000473420 ARHGEF6Q15052 776 aa22.11■■□□□ 1.13
CTDSP1-207ENST00000473420 PPP2R5BQ15173 497 aa22.11■■□□□ 1.13
CTDSP1-207ENST00000473420 ANKRD1Q15327 319 aa22.11■■□□□ 1.13
CTDSP1-207ENST00000473420 Q3C1V9 767 aa22.11■■□□□ 1.13
CTDSP1-207ENST00000473420 MICU3Q86XE3 530 aa22.11■■□□□ 1.13
CTDSP1-207ENST00000473420 FANCBQ8NB91 859 aa22.11■■□□□ 1.13
CTDSP1-207ENST00000473420 SHCBP1Q8NEM2 672 aa22.11■■□□□ 1.13
CTDSP1-207ENST00000473420 LZTS2Q9BRK4 669 aa22.11■■□□□ 1.13
CTDSP1-207ENST00000473420 SMARCA1P28370 1054 aa22.1■■□□□ 1.13
CTDSP1-207ENST00000473420 MAPK4P31152 587 aa22.1■■□□□ 1.13
CTDSP1-207ENST00000473420 COPB2P35606 906 aa22.1■■□□□ 1.13
CTDSP1-207ENST00000473420 CD99L2Q8TCZ2 262 aa22.1■■□□□ 1.13
CTDSP1-207ENST00000473420 TEX13BQ9BXU2 312 aa22.1■■□□□ 1.13
CTDSP1-207ENST00000473420 UBA5Q9GZZ9 404 aa22.1■■□□□ 1.13
CTDSP1-207ENST00000473420 RBM28Q9NW13 759 aaKnown RBP22.1■■□□□ 1.13
CTDSP1-207ENST00000473420 PLXNB2O15031 1838 aa22.1■■□□□ 1.13
CTDSP1-207ENST00000473420 ZNF236Q9UL36 1845 aa22.09■■□□□ 1.13
CTDSP1-207ENST00000473420 PEX10O60683 326 aa22.09■■□□□ 1.13
CTDSP1-207ENST00000473420 SLC25A27O95847 323 aa22.09■■□□□ 1.13
CTDSP1-207ENST00000473420 GNRH1P01148 92 aa22.09■■□□□ 1.13
CTDSP1-207ENST00000473420 STAT3P40763 770 aa22.09■■□□□ 1.13
CTDSP1-207ENST00000473420 NEK4P51957 841 aa22.09■■□□□ 1.13
CTDSP1-207ENST00000473420 FCGRTP55899 365 aa22.09■■□□□ 1.13
CTDSP1-207ENST00000473420 RIOX2Q8IUF8 465 aa22.09■■□□□ 1.13
CTDSP1-207ENST00000473420 ADGRF4Q8IZF3 695 aa22.09■■□□□ 1.13
CTDSP1-207ENST00000473420 MOV10L1Q9BXT6 1211 aaKnown RBP22.09■■□□□ 1.13
CTDSP1-207ENST00000473420 RIOX1Q9H6W3 641 aa22.09■■□□□ 1.13
CTDSP1-207ENST00000473420 PNMA2Q9UL42 364 aa22.09■■□□□ 1.13
CTDSP1-207ENST00000473420 GOLGA8AA7E2F4 631 aa22.08■■□□□ 1.13
CTDSP1-207ENST00000473420 GOLGA8BA8MQT2 603 aa22.08■■□□□ 1.13
CTDSP1-207ENST00000473420 RXRAP19793 462 aa22.08■■□□□ 1.13
CTDSP1-207ENST00000473420 PSMC4P43686 418 aa22.08■■□□□ 1.13
CTDSP1-207ENST00000473420 PLS1Q14651 629 aa22.08■■□□□ 1.13
CTDSP1-207ENST00000473420 ZNF274Q96GC6 653 aaPredicted RBP22.08■■□□□ 1.13
CTDSP1-207ENST00000473420 SPZ1Q9BXG8 430 aa22.08■■□□□ 1.13
CTDSP1-207ENST00000473420 ZNF536O15090 1300 aa22.07■■□□□ 1.12
CTDSP1-207ENST00000473420 ICAM1P05362 532 aa22.07■■□□□ 1.12
CTDSP1-207ENST00000473420 METAP2P50579 478 aaKnown RBP eCLIP22.07■■□□□ 1.12
CTDSP1-207ENST00000473420 AK2P54819 239 aa22.07■■□□□ 1.12
CTDSP1-207ENST00000473420 RABEP1Q15276 862 aa22.07■■□□□ 1.12
CTDSP1-207ENST00000473420 RTN1Q16799 776 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms