RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 ZNF532Q9HCE3 1301 aa8.34□□□□□ -1.07
CKS1B-205ENST00000473344 GOLIM4O00461 696 aa8.34□□□□□ -1.07
CKS1B-205ENST00000473344 RAD21O60216 631 aa8.34□□□□□ -1.07
CKS1B-205ENST00000473344 COBLO75128 1261 aa8.34□□□□□ -1.07
CKS1B-205ENST00000473344 SLC25A27O95847 323 aa8.34□□□□□ -1.07
CKS1B-205ENST00000473344 PDE6AP16499 860 aa8.34□□□□□ -1.07
CKS1B-205ENST00000473344 PDE4AP27815 886 aa8.34□□□□□ -1.07
CKS1B-205ENST00000473344 SMAD3P84022 425 aaKnown RBP8.34□□□□□ -1.07
CKS1B-205ENST00000473344 ICA1Q05084 483 aa8.34□□□□□ -1.07
CKS1B-205ENST00000473344 GABPAQ06546 454 aa8.34□□□□□ -1.07
CKS1B-205ENST00000473344 KCTD2Q14681 263 aa8.34□□□□□ -1.07
CKS1B-205ENST00000473344 LRRC41Q15345 812 aa8.34□□□□□ -1.07
CKS1B-205ENST00000473344 PRAMEF19Q5SWL8 479 aa8.34□□□□□ -1.07
CKS1B-205ENST00000473344 C9orf50Q5SZB4 431 aa8.34□□□□□ -1.07
CKS1B-205ENST00000473344 CEP85Q6P2H3 762 aa8.34□□□□□ -1.07
CKS1B-205ENST00000473344 CLASRPQ8N2M8 674 aaKnown RBP8.34□□□□□ -1.07
CKS1B-205ENST00000473344 MAFAQ8NHW3 353 aaPredicted RBP8.34□□□□□ -1.07
CKS1B-205ENST00000473344 UBE2Q2Q8WVN8 375 aa8.34□□□□□ -1.07
CKS1B-205ENST00000473344 DDRGK1Q96HY6 314 aa8.34□□□□□ -1.07
CKS1B-205ENST00000473344 DNAJC2Q99543 621 aaKnown RBP8.34□□□□□ -1.07
CKS1B-205ENST00000473344 SEMA6BQ9H3T3 888 aa8.34□□□□□ -1.07
CKS1B-205ENST00000473344 IL1RAPL2Q9NP60 686 aa8.34□□□□□ -1.07
CKS1B-205ENST00000473344 VPS9D1Q9Y2B5 631 aa8.34□□□□□ -1.07
CKS1B-205ENST00000473344 TACC3Q9Y6A5 838 aa8.34□□□□□ -1.07
CKS1B-205ENST00000473344 APBB1O00213 710 aa8.33□□□□□ -1.08
CKS1B-205ENST00000473344 WDR46O15213 610 aaKnown RBP8.33□□□□□ -1.08
CKS1B-205ENST00000473344 CLTBP09497 229 aa8.33□□□□□ -1.08
CKS1B-205ENST00000473344 IFIT2P09913 472 aaKnown RBP8.33□□□□□ -1.08
CKS1B-205ENST00000473344 FOSL2P15408 326 aa8.33□□□□□ -1.08
CKS1B-205ENST00000473344 RAG1P15918 1043 aa8.33□□□□□ -1.08
CKS1B-205ENST00000473344 TLE2Q04725 743 aa8.33□□□□□ -1.08
CKS1B-205ENST00000473344 SNX17Q15036 470 aa8.33□□□□□ -1.08
CKS1B-205ENST00000473344 FAM47AQ5JRC9 791 aa8.33□□□□□ -1.08
CKS1B-205ENST00000473344 C1orf53Q5VUE5 145 aa8.33□□□□□ -1.08
CKS1B-205ENST00000473344 LCORLQ8N3X6 602 aa8.33□□□□□ -1.08
CKS1B-205ENST00000473344 MYLIPQ8WY64 445 aa8.33□□□□□ -1.08
CKS1B-205ENST00000473344 ATG4CQ96DT6 458 aa8.33□□□□□ -1.08
CKS1B-205ENST00000473344 RNPC3Q96LT9 517 aaKnown RBP8.33□□□□□ -1.08
CKS1B-205ENST00000473344 MMP19Q99542 508 aa8.33□□□□□ -1.08
CKS1B-205ENST00000473344 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.33□□□□□ -1.08
CKS1B-205ENST00000473344 VCPKMTQ9H867 229 aa8.33□□□□□ -1.08
CKS1B-205ENST00000473344 DCP1AQ9NPI6 582 aaPredicted RBP8.33□□□□□ -1.08
CKS1B-205ENST00000473344 PDLIM7Q9NR12 457 aa8.33□□□□□ -1.08
CKS1B-205ENST00000473344 ATP8A2Q9NTI2 1148 aa8.33□□□□□ -1.08
CKS1B-205ENST00000473344 NRBP1Q9UHY1 535 aa8.33□□□□□ -1.08
CKS1B-205ENST00000473344 TMX2Q9Y320 296 aa8.33□□□□□ -1.08
CKS1B-205ENST00000473344 CDK5RAP2Q96SN8 1893 aa8.32□□□□□ -1.08
CKS1B-205ENST00000473344 XIRP2A4UGR9 3374 aa8.32□□□□□ -1.08
CKS1B-205ENST00000473344 TRIM43BA6NCK2 446 aa8.32□□□□□ -1.08
CKS1B-205ENST00000473344 PQBP1O60828 265 aaKnown RBP8.32□□□□□ -1.08
CKS1B-205ENST00000473344 PGK1P00558 417 aa8.32□□□□□ -1.08
CKS1B-205ENST00000473344 IGHA2P01877 340 aa8.32□□□□□ -1.08
CKS1B-205ENST00000473344 CYP2D6P10635 497 aa8.32□□□□□ -1.08
CKS1B-205ENST00000473344 AKR1A1P14550 325 aa8.32□□□□□ -1.08
CKS1B-205ENST00000473344 AKR1B1P15121 316 aa8.32□□□□□ -1.08
CKS1B-205ENST00000473344 DEKP35659 375 aaKnown RBP8.32□□□□□ -1.08
CKS1B-205ENST00000473344 TMEM132BQ14DG7 1078 aa8.32□□□□□ -1.08
CKS1B-205ENST00000473344 PPP1R15BQ5SWA1 713 aa8.32□□□□□ -1.08
CKS1B-205ENST00000473344 SH3RF1Q7Z6J0 888 aa8.32□□□□□ -1.08
CKS1B-205ENST00000473344 ZNF454Q8N9F8 522 aa8.32□□□□□ -1.08
CKS1B-205ENST00000473344 SLC44A5Q8NCS7 719 aa8.32□□□□□ -1.08
CKS1B-205ENST00000473344 RHPN1Q8TCX5 695 aa8.32□□□□□ -1.08
CKS1B-205ENST00000473344 NUP133Q8WUM0 1156 aa8.32□□□□□ -1.08
CKS1B-205ENST00000473344 SYMPKQ92797 1274 aaKnown RBP8.32□□□□□ -1.08
CKS1B-205ENST00000473344 TRIM43Q96BQ3 446 aaPredicted RBP8.32□□□□□ -1.08
CKS1B-205ENST00000473344 KIF1BPQ96EK5 621 aa8.32□□□□□ -1.08
CKS1B-205ENST00000473344 DYNLL2Q96FJ2 89 aa8.32□□□□□ -1.08
CKS1B-205ENST00000473344 CCDC17Q96LX7 622 aa8.32□□□□□ -1.08
CKS1B-205ENST00000473344 TINF2Q9BSI4 451 aa8.32□□□□□ -1.08
CKS1B-205ENST00000473344 ARMT1Q9H993 441 aa8.32□□□□□ -1.08
CKS1B-205ENST00000473344 GOPCQ9HD26 462 aa8.32□□□□□ -1.08
CKS1B-205ENST00000473344 TMEM39AQ9NV64 488 aa8.32□□□□□ -1.08
CKS1B-205ENST00000473344 CNPY2Q9Y2B0 182 aa8.32□□□□□ -1.08
CKS1B-205ENST00000473344 FRMPD3Q5JV73 1810 aa8.31□□□□□ -1.08
CKS1B-205ENST00000473344 ZNF236Q9UL36 1845 aa8.31□□□□□ -1.08
CKS1B-205ENST00000473344 MYH1P12882 1939 aa8.31□□□□□ -1.08
CKS1B-205ENST00000473344 TMEM265A0A087WTH1 108 aa8.31□□□□□ -1.08
CKS1B-205ENST00000473344 TCRBV5S4A2TA0A5A2 114 aa8.31□□□□□ -1.08
CKS1B-205ENST00000473344 DCDC2CA8MYV0 355 aa8.31□□□□□ -1.08
CKS1B-205ENST00000473344 HMMRO75330 724 aa8.31□□□□□ -1.08
CKS1B-205ENST00000473344 MBD4O95243 580 aa8.31□□□□□ -1.08
CKS1B-205ENST00000473344 PGK2P07205 417 aa8.31□□□□□ -1.08
CKS1B-205ENST00000473344 RLBP1P12271 317 aa8.31□□□□□ -1.08
CKS1B-205ENST00000473344 COPB2P35606 906 aa8.31□□□□□ -1.08
CKS1B-205ENST00000473344 STAT3P40763 770 aa8.31□□□□□ -1.08
CKS1B-205ENST00000473344 FPGSQ05932 587 aa8.31□□□□□ -1.08
CKS1B-205ENST00000473344 KIAA1755Q5JYT7 1200 aa8.31□□□□□ -1.08
CKS1B-205ENST00000473344 RIOX2Q8IUF8 465 aa8.31□□□□□ -1.08
CKS1B-205ENST00000473344 CLEC10AQ8IUN9 316 aa8.31□□□□□ -1.08
CKS1B-205ENST00000473344 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.31□□□□□ -1.08
CKS1B-205ENST00000473344 TTYH1Q9H313 450 aaPredicted RBP8.31□□□□□ -1.08
CKS1B-205ENST00000473344 KANSL2Q9H9L4 492 aa8.31□□□□□ -1.08
CKS1B-205ENST00000473344 STARD7Q9NQZ5 370 aa8.31□□□□□ -1.08
CKS1B-205ENST00000473344 PAG1Q9NWQ8 432 aa8.31□□□□□ -1.08
CKS1B-205ENST00000473344 PHF24Q9UPV7 400 aa8.31□□□□□ -1.08
CKS1B-205ENST00000473344 DIS3Q9Y2L1 958 aaKnown RBP8.31□□□□□ -1.08
CKS1B-205ENST00000473344 CTDP1Q9Y5B0 961 aaPredicted RBP8.31□□□□□ -1.08
CKS1B-205ENST00000473344 A0A1W2PQ45 241 aaPredicted RBP8.3□□□□□ -1.08
CKS1B-205ENST00000473344 A0A1W2PQY0 241 aa8.3□□□□□ -1.08
CKS1B-205ENST00000473344 USP17L12C9JPN9 530 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms