RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 GBP3Q9H0R5 595 aa8.75□□□□□ -1.01
CLK1-209ENST00000472679 PPM1BO75688 479 aa8.74□□□□□ -1.01
CLK1-209ENST00000472679 LTKP29376 864 aa8.74□□□□□ -1.01
CLK1-209ENST00000472679 SOGA3Q5TF21 947 aa8.74□□□□□ -1.01
CLK1-209ENST00000472679 TP53INP2Q8IXH6 220 aa8.74□□□□□ -1.01
CLK1-209ENST00000472679 FOXP3Q9BZS1 431 aa8.74□□□□□ -1.01
CLK1-209ENST00000472679 A0A087WZG4 1122 aa8.73□□□□□ -1.01
CLK1-209ENST00000472679 FAM221BA6H8Z2 402 aa8.73□□□□□ -1.01
CLK1-209ENST00000472679 IGSF3O75054 1194 aa8.73□□□□□ -1.01
CLK1-209ENST00000472679 FUT4P22083 530 aa8.73□□□□□ -1.01
CLK1-209ENST00000472679 ZNF143P52747 638 aaPredicted RBP8.73□□□□□ -1.01
CLK1-209ENST00000472679 EGR3Q06889 387 aa8.73□□□□□ -1.01
CLK1-209ENST00000472679 SLC10A6Q3KNW5 377 aa8.73□□□□□ -1.01
CLK1-209ENST00000472679 EEPD1Q7L9B9 569 aa8.73□□□□□ -1.01
CLK1-209ENST00000472679 ZDHHC15Q96MV8 337 aa8.73□□□□□ -1.01
CLK1-209ENST00000472679 OSBPL2Q9H1P3 480 aa8.73□□□□□ -1.01
CLK1-209ENST00000472679 LMCD1Q9NZU5 365 aa8.73□□□□□ -1.01
CLK1-209ENST00000472679 CGGBP1Q9UFW8 167 aaPredicted RBP8.73□□□□□ -1.01
CLK1-209ENST00000472679 ADAMTS6Q9UKP5 1117 aa8.73□□□□□ -1.01
CLK1-209ENST00000472679 SUGT1Q9Y2Z0 365 aa8.73□□□□□ -1.01
CLK1-209ENST00000472679 SYPP08247 313 aa8.72□□□□□ -1.01
CLK1-209ENST00000472679 TEKQ02763 1124 aa8.72□□□□□ -1.01
CLK1-209ENST00000472679 SV2CQ496J9 727 aa8.72□□□□□ -1.01
CLK1-209ENST00000472679 Q8N3U1 123 aa8.72□□□□□ -1.01
CLK1-209ENST00000472679 ARHGEF39Q8N4T4 335 aa8.72□□□□□ -1.01
CLK1-209ENST00000472679 LINC00116Q8NCU8 138 aa8.72□□□□□ -1.01
CLK1-209ENST00000472679 PPP1R14AQ96A00 147 aa8.72□□□□□ -1.01
CLK1-209ENST00000472679 TCFL5Q9UL49 500 aa8.72□□□□□ -1.01
CLK1-209ENST00000472679 DIS3Q9Y2L1 958 aaKnown RBP8.72□□□□□ -1.01
CLK1-209ENST00000472679 PDPK1O15530 556 aa8.71□□□□□ -1.02
CLK1-209ENST00000472679 GSNP06396 782 aa8.71□□□□□ -1.02
CLK1-209ENST00000472679 GP2P55259 537 aaKnown RBP8.71□□□□□ -1.02
CLK1-209ENST00000472679 RASA3Q14644 834 aa8.71□□□□□ -1.02
CLK1-209ENST00000472679 PLCL1Q15111 1095 aa8.71□□□□□ -1.02
CLK1-209ENST00000472679 CCDC144BQ3MJ40 725 aa8.71□□□□□ -1.02
CLK1-209ENST00000472679 DPH6Q7L8W6 267 aa8.71□□□□□ -1.02
CLK1-209ENST00000472679 RCC1LQ96I51 464 aaKnown RBP8.71□□□□□ -1.02
CLK1-209ENST00000472679 CCDC113Q9H0I3 377 aa8.71□□□□□ -1.02
CLK1-209ENST00000472679 SNTG2Q9NY99 539 aa8.71□□□□□ -1.02
CLK1-209ENST00000472679 AKT3Q9Y243 479 aa8.71□□□□□ -1.02
CLK1-209ENST00000472679 TBX1O43435 398 aa8.7□□□□□ -1.02
CLK1-209ENST00000472679 FKTNO75072 461 aa8.7□□□□□ -1.02
CLK1-209ENST00000472679 VAMP4O75379 141 aa8.7□□□□□ -1.02
CLK1-209ENST00000472679 ITGAVP06756 1048 aa8.7□□□□□ -1.02
CLK1-209ENST00000472679 NAT2P11245 290 aa8.7□□□□□ -1.02
CLK1-209ENST00000472679 VAV1P15498 845 aa8.7□□□□□ -1.02
CLK1-209ENST00000472679 BMP8BP34820 402 aa8.7□□□□□ -1.02
CLK1-209ENST00000472679 PCBP3P57721 371 aaKnown RBP8.7□□□□□ -1.02
CLK1-209ENST00000472679 ZPBP2Q6X784 338 aa8.7□□□□□ -1.02
CLK1-209ENST00000472679 ABI1Q8IZP0 508 aa8.7□□□□□ -1.02
CLK1-209ENST00000472679 LRRN4CLQ8ND94 238 aa8.7□□□□□ -1.02
CLK1-209ENST00000472679 BVESQ8NE79 360 aa8.7□□□□□ -1.02
CLK1-209ENST00000472679 DEPDC7Q96QD5 511 aa8.7□□□□□ -1.02
CLK1-209ENST00000472679 MCMBPQ9BTE3 642 aa8.7□□□□□ -1.02
CLK1-209ENST00000472679 MBNL3Q9NUK0 354 aaKnown RBP8.7□□□□□ -1.02
CLK1-209ENST00000472679 SF3B6Q9Y3B4 125 aaKnown RBP8.7□□□□□ -1.02
CLK1-209ENST00000472679 EMC9Q9Y3B6 208 aa8.7□□□□□ -1.02
CLK1-209ENST00000472679 OAS3Q9Y6K5 1087 aaKnown RBP8.7□□□□□ -1.02
CLK1-209ENST00000472679 DNAJC25-GNG10A0A024R161 153 aa8.69□□□□□ -1.02
CLK1-209ENST00000472679 TMEM82A0PJX8 343 aa8.69□□□□□ -1.02
CLK1-209ENST00000472679 ZNF205O95201 554 aa8.69□□□□□ -1.02
CLK1-209ENST00000472679 BMS1Q14692 1282 aaKnown RBP8.69□□□□□ -1.02
CLK1-209ENST00000472679 RALGPS1Q5JS13 557 aa8.69□□□□□ -1.02
CLK1-209ENST00000472679 RNF111Q6ZNA4 994 aa8.69□□□□□ -1.02
CLK1-209ENST00000472679 SPATC1Q76KD6 591 aa8.69□□□□□ -1.02
CLK1-209ENST00000472679 PI4K2BQ8TCG2 481 aa8.69□□□□□ -1.02
CLK1-209ENST00000472679 MKL1Q969V6 931 aa8.69□□□□□ -1.02
CLK1-209ENST00000472679 MRGPRX3Q96LB0 322 aa8.69□□□□□ -1.02
CLK1-209ENST00000472679 SRPK1Q96SB4 655 aaKnown RBP8.69□□□□□ -1.02
CLK1-209ENST00000472679 SLC12A9Q9BXP2 914 aa8.69□□□□□ -1.02
CLK1-209ENST00000472679 ZSWIM4Q9H7M6 989 aa8.69□□□□□ -1.02
CLK1-209ENST00000472679 SLAMF8Q9P0V8 285 aa8.69□□□□□ -1.02
CLK1-209ENST00000472679 ZNF281Q9Y2X9 895 aa8.69□□□□□ -1.02
CLK1-209ENST00000472679 SSU72P8A0A1W2PR75 194 aa8.68□□□□□ -1.02
CLK1-209ENST00000472679 RNASE1P07998 156 aaKnown RBP8.68□□□□□ -1.02
CLK1-209ENST00000472679 RASGRF1Q13972 1273 aa8.68□□□□□ -1.02
CLK1-209ENST00000472679 DPY19L1Q2PZI1 675 aa8.68□□□□□ -1.02
CLK1-209ENST00000472679 ZNF792Q3KQV3 632 aa8.68□□□□□ -1.02
CLK1-209ENST00000472679 RTP2Q5QGT7 225 aa8.68□□□□□ -1.02
CLK1-209ENST00000472679 CWF19L1Q69YN2 538 aaKnown RBP8.68□□□□□ -1.02
CLK1-209ENST00000472679 SLC23A3Q6PIS1 610 aa8.68□□□□□ -1.02
CLK1-209ENST00000472679 ZNF227Q86WZ6 799 aa8.68□□□□□ -1.02
CLK1-209ENST00000472679 AGBL5Q8NDL9 886 aa8.68□□□□□ -1.02
CLK1-209ENST00000472679 ST13P5Q8NFI4 369 aaPredicted RBP8.68□□□□□ -1.02
CLK1-209ENST00000472679 FCRL3Q96P31 734 aaPredicted RBP8.68□□□□□ -1.02
CLK1-209ENST00000472679 EPN3Q9H201 632 aa8.68□□□□□ -1.02
CLK1-209ENST00000472679 ADAMTS10Q9H324 1103 aa8.68□□□□□ -1.02
CLK1-209ENST00000472679 PIF1Q9H611 641 aa8.68□□□□□ -1.02
CLK1-209ENST00000472679 EBF1Q9UH73 591 aa8.68□□□□□ -1.02
CLK1-209ENST00000472679 KCNH1O95259 989 aa8.67□□□□□ -1.02
CLK1-209ENST00000472679 CD3EP07766 207 aa8.67□□□□□ -1.02
CLK1-209ENST00000472679 IFNGR1P15260 489 aa8.67□□□□□ -1.02
CLK1-209ENST00000472679 RPL10P27635 214 aaKnown RBP8.67□□□□□ -1.02
CLK1-209ENST00000472679 ALPK1Q96QP1 1244 aa8.67□□□□□ -1.02
CLK1-209ENST00000472679 LRP2BPQ9P2M1 347 aa8.67□□□□□ -1.02
CLK1-209ENST00000472679 PFDN2Q9UHV9 154 aa8.67□□□□□ -1.02
CLK1-209ENST00000472679 CDK11AQ9UQ88 783 aaPredicted RBP8.67□□□□□ -1.02
CLK1-209ENST00000472679 GPR55Q9Y2T6 319 aaPredicted RBP8.67□□□□□ -1.02
CLK1-209ENST00000472679 A0A1W2PQU0 124 aa8.66□□□□□ -1.02
CLK1-209ENST00000472679 NOP56O00567 594 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms