RNA–Protein interactions for RNA: ENST00000472398.5

TTC3-214, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,305 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-214ENST00000472398 SKIP12755 728 aa3.71□□□□□ -1.82
TTC3-214ENST00000472398 MUTP22033 750 aa3.71□□□□□ -1.82
TTC3-214ENST00000472398 POLR2BP30876 1174 aaKnown RBP3.71□□□□□ -1.82
TTC3-214ENST00000472398 SLC19A1P41440 591 aa3.71□□□□□ -1.82
TTC3-214ENST00000472398 SKIV2L2P42285 1042 aaKnown RBP3.71□□□□□ -1.82
TTC3-214ENST00000472398 KIF11P52732 1056 aa3.71□□□□□ -1.82
TTC3-214ENST00000472398 SESN3P58005 492 aa3.71□□□□□ -1.82
TTC3-214ENST00000472398 RAC1P63000 192 aa3.71□□□□□ -1.82
TTC3-214ENST00000472398 PDE4BQ07343 736 aa3.71□□□□□ -1.82
TTC3-214ENST00000472398 PRKG2Q13237 762 aa3.71□□□□□ -1.82
TTC3-214ENST00000472398 SMC1AQ14683 1233 aaKnown RBP3.71□□□□□ -1.82
TTC3-214ENST00000472398 GFOD2Q3B7J2 385 aa3.71□□□□□ -1.82
TTC3-214ENST00000472398 TM4SF20Q53R12 229 aa3.71□□□□□ -1.82
TTC3-214ENST00000472398 RRP12Q5JTH9 1297 aaKnown RBP3.71□□□□□ -1.82
TTC3-214ENST00000472398 ISM2Q6H9L7 571 aa3.71□□□□□ -1.82
TTC3-214ENST00000472398 TRMT2AQ8IZ69 625 aaKnown RBP3.71□□□□□ -1.82
TTC3-214ENST00000472398 RTKN2Q8IZC4 609 aa3.71□□□□□ -1.82
TTC3-214ENST00000472398 FAM184AQ8NB25 1140 aa3.71□□□□□ -1.82
TTC3-214ENST00000472398 BRSK1Q8TDC3 778 aa3.71□□□□□ -1.82
TTC3-214ENST00000472398 NSUN6Q8TEA1 469 aaKnown RBP3.71□□□□□ -1.82
TTC3-214ENST00000472398 AFAP1L1Q8TED9 768 aa3.71□□□□□ -1.82
TTC3-214ENST00000472398 TNPO1Q92973 898 aaKnown RBP3.71□□□□□ -1.82
TTC3-214ENST00000472398 GJA10Q969M2 543 aa3.71□□□□□ -1.82
TTC3-214ENST00000472398 TCHPQ9BT92 498 aa3.71□□□□□ -1.82
TTC3-214ENST00000472398 CARD14Q9BXL6 1004 aa3.71□□□□□ -1.82
TTC3-214ENST00000472398 CAPS2Q9BXY5 557 aa3.71□□□□□ -1.82
TTC3-214ENST00000472398 MRPL9Q9BYD2 267 aaKnown RBP3.71□□□□□ -1.82
TTC3-214ENST00000472398 STARD7Q9NQZ5 370 aa3.71□□□□□ -1.82
TTC3-214ENST00000472398 CCDC87Q9NVE4 849 aa3.71□□□□□ -1.82
TTC3-214ENST00000472398 HECAQ9UBI9 543 aaPredicted RBP3.71□□□□□ -1.82
TTC3-214ENST00000472398 DDX20Q9UHI6 824 aaKnown RBP3.71□□□□□ -1.82
TTC3-214ENST00000472398 PFDN2Q9UHV9 154 aa3.71□□□□□ -1.82
TTC3-214ENST00000472398 CNPY2Q9Y2B0 182 aa3.71□□□□□ -1.82
TTC3-214ENST00000472398 SLC30A1Q9Y6M5 507 aa3.71□□□□□ -1.82
TTC3-214ENST00000472398 MAGEB6P1A0A0J9YX57 407 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 FAM170AA1A519 330 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 C9IYK1 514 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 XPOTO43592 962 aaKnown RBP3.7□□□□□ -1.82
TTC3-214ENST00000472398 AHCYL1O43865 530 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 DKK1O94907 266 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 PAHP00439 452 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 ALAS1P13196 640 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 TNNT1P13805 278 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 DDIT3P35638 169 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 NASPP49321 788 aaPredicted RBP3.7□□□□□ -1.82
TTC3-214ENST00000472398 ZNF280AP59817 542 aaPredicted RBP3.7□□□□□ -1.82
TTC3-214ENST00000472398 POLR2FP61218 127 aaKnown RBP3.7□□□□□ -1.82
TTC3-214ENST00000472398 MPP1Q00013 466 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 PRPF4BQ13523 1007 aaKnown RBP3.7□□□□□ -1.82
TTC3-214ENST00000472398 GRM3Q14832 879 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 WSCD2Q2TBF2 565 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 CCDC178Q5BJE1 867 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 MEI1Q5TIA1 1274 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 TEX11Q8IYF3 940 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 PI4K2BQ8TCG2 481 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 RASGRP4Q8TDF6 673 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 SLC16A10Q8TF71 515 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 GMCL1Q96IK5 515 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 UIMC1Q96RL1 719 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 NLRC4Q9NPP4 1024 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 VPS45Q9NRW7 570 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 CHMP5Q9NZZ3 219 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 SLC4A7Q9Y6M7 1214 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 ABHD14A-ACY1A0A1B0GW23 586 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 TMCO5BA8MYB1 307 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 F5H423 210 aaPredicted RBP3.7□□□□□ -1.82
TTC3-214ENST00000472398 ATP5J2-PTCD1G3V325 749 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 SKAP2O75563 359 aaPredicted RBP3.7□□□□□ -1.82
TTC3-214ENST00000472398 MTRF1O75570 445 aaKnown RBP3.7□□□□□ -1.82
TTC3-214ENST00000472398 ABLIM3O94929 683 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 CYP17A1P05093 508 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 GNAT2P19087 354 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 XPAP23025 273 aaPredicted RBP3.7□□□□□ -1.82
TTC3-214ENST00000472398 CCNCP24863 283 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 MXI1P50539 228 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 PDE6CP51160 858 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 TMF1P82094 1093 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 MLLT1Q03111 559 aaPredicted RBP3.7□□□□□ -1.82
TTC3-214ENST00000472398 LAPTM5Q13571 262 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 MOGSQ13724 837 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 RASA2Q15283 850 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 KIF4BQ2VIQ3 1234 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 SPRYD7Q5W111 196 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 CYB5RLQ6IPT4 315 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 BNC2Q6ZN30 1099 aaPredicted RBP3.7□□□□□ -1.82
TTC3-214ENST00000472398 HS2ST1Q7LGA3 356 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 NLRP14Q86W24 1093 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 GALNT13Q8IUC8 556 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 IPMKQ8NFU5 416 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 CHAC2Q8WUX2 184 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 USP6NLQ92738 828 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 DPF3Q92784 378 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 KCNN1Q92952 543 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 KCTD15Q96SI1 283 aaPredicted RBP3.7□□□□□ -1.82
TTC3-214ENST00000472398 GPATCH1Q9BRR8 931 aaKnown RBP3.7□□□□□ -1.82
TTC3-214ENST00000472398 DNAI2Q9GZS0 605 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 UNC45AQ9H3U1 944 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 KIAA1586Q9HCI6 787 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 TRPV5Q9NQA5 729 aa3.7□□□□□ -1.82
TTC3-214ENST00000472398 AASDHPPTQ9NRN7 309 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms