RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 VPS53Q5VIR6 699 aa15.99■□□□□ 0.15
HMGN1-211ENST00000471260 SLFN13Q68D06 897 aa15.99■□□□□ 0.15
HMGN1-211ENST00000471260 CHRDL2Q6WN34 429 aa15.99■□□□□ 0.15
HMGN1-211ENST00000471260 PLEKHM2Q8IWE5 1019 aa15.99■□□□□ 0.15
HMGN1-211ENST00000471260 FAM227BQ96M60 508 aa15.99■□□□□ 0.15
HMGN1-211ENST00000471260 NUP88Q99567 741 aaPredicted RBP15.99■□□□□ 0.15
HMGN1-211ENST00000471260 CTDP1Q9Y5B0 961 aaPredicted RBP15.99■□□□□ 0.15
HMGN1-211ENST00000471260 COL11A1P12107 1806 aaPredicted RBP15.98■□□□□ 0.15
HMGN1-211ENST00000471260 A0A0D9SFI3 127 aa15.98■□□□□ 0.15
HMGN1-211ENST00000471260 A0A1W2PPC1 479 aa15.98■□□□□ 0.15
HMGN1-211ENST00000471260 SEPT4O43236 478 aa15.98■□□□□ 0.15
HMGN1-211ENST00000471260 FGAP02671 866 aa15.98■□□□□ 0.15
HMGN1-211ENST00000471260 HSPD1P10809 573 aaKnown RBP15.98■□□□□ 0.15
HMGN1-211ENST00000471260 PCP11498 1178 aaKnown RBP15.98■□□□□ 0.15
HMGN1-211ENST00000471260 BMP3P12645 472 aa15.98■□□□□ 0.15
HMGN1-211ENST00000471260 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.98■□□□□ 0.15
HMGN1-211ENST00000471260 FAM160B2Q86V87 743 aa15.98■□□□□ 0.15
HMGN1-211ENST00000471260 LRRC47Q8N1G4 583 aaKnown RBP15.98■□□□□ 0.15
HMGN1-211ENST00000471260 MSL3Q8N5Y2 521 aaKnown RBP15.98■□□□□ 0.15
HMGN1-211ENST00000471260 ARRDC4Q8NCT1 418 aa15.98■□□□□ 0.15
HMGN1-211ENST00000471260 TRPV1Q8NER1 839 aa15.98■□□□□ 0.15
HMGN1-211ENST00000471260 CHURC1Q8WUH1 139 aa15.98■□□□□ 0.15
HMGN1-211ENST00000471260 RILPL2Q969X0 211 aa15.98■□□□□ 0.15
HMGN1-211ENST00000471260 GMCL1Q96IK5 515 aa15.98■□□□□ 0.15
HMGN1-211ENST00000471260 PRO3102Q9H379 93 aa15.98■□□□□ 0.15
HMGN1-211ENST00000471260 SLC38A10Q9HBR0 1119 aa15.98■□□□□ 0.15
HMGN1-211ENST00000471260 PCDH10Q9P2E7 1040 aa15.98■□□□□ 0.15
HMGN1-211ENST00000471260 ZNFX1Q9P2E3 1918 aaKnown RBP15.98■□□□□ 0.15
HMGN1-211ENST00000471260 PFASO15067 1338 aa15.97■□□□□ 0.15
HMGN1-211ENST00000471260 CCDC171Q6TFL3 1326 aa15.97■□□□□ 0.15
HMGN1-211ENST00000471260 HIP1O00291 1037 aa15.97■□□□□ 0.15
HMGN1-211ENST00000471260 DNM1LO00429 736 aa15.97■□□□□ 0.15
HMGN1-211ENST00000471260 PLA2G6O60733 806 aa15.97■□□□□ 0.15
HMGN1-211ENST00000471260 SDSP20132 328 aa15.97■□□□□ 0.15
HMGN1-211ENST00000471260 SLC1A4P43007 532 aa15.97■□□□□ 0.15
HMGN1-211ENST00000471260 NOVP48745 357 aa15.97■□□□□ 0.15
HMGN1-211ENST00000471260 NT5C2P49902 561 aa15.97■□□□□ 0.15
HMGN1-211ENST00000471260 STAT2P52630 851 aa15.97■□□□□ 0.15
HMGN1-211ENST00000471260 CTDSPL2Q05D32 466 aa15.97■□□□□ 0.15
HMGN1-211ENST00000471260 NMIQ13287 307 aaPredicted RBP15.97■□□□□ 0.15
HMGN1-211ENST00000471260 ZNF792Q3KQV3 632 aa15.97■□□□□ 0.15
HMGN1-211ENST00000471260 SNRNP48Q6IEG0 339 aaKnown RBP15.97■□□□□ 0.15
HMGN1-211ENST00000471260 KIFC2Q96AC6 838 aa15.97■□□□□ 0.15
HMGN1-211ENST00000471260 RBM27Q9P2N5 1060 aaKnown RBP15.97■□□□□ 0.15
HMGN1-211ENST00000471260 FBXO40Q9UH90 709 aa15.97■□□□□ 0.15
HMGN1-211ENST00000471260 STX8Q9UNK0 236 aa15.97■□□□□ 0.15
HMGN1-211ENST00000471260 RANBP6O60518 1105 aaKnown RBP15.96■□□□□ 0.15
HMGN1-211ENST00000471260 FXR1P51114 621 aaKnown RBP eCLIP15.96■□□□□ 0.15
HMGN1-211ENST00000471260 CHST13Q8NET6 341 aa15.96■□□□□ 0.15
HMGN1-211ENST00000471260 STAG1Q8WVM7 1258 aa15.96■□□□□ 0.15
HMGN1-211ENST00000471260 TINF2Q9BSI4 451 aa15.96■□□□□ 0.15
HMGN1-211ENST00000471260 IL17RBQ9NRM6 502 aa15.96■□□□□ 0.15
HMGN1-211ENST00000471260 TCP11L1Q9NUJ3 509 aa15.96■□□□□ 0.15
HMGN1-211ENST00000471260 TMEM232C9JQI7 657 aa15.95■□□□□ 0.14
HMGN1-211ENST00000471260 PGK2P07205 417 aa15.95■□□□□ 0.14
HMGN1-211ENST00000471260 ZNF589Q86UQ0 364 aaPredicted RBP15.95■□□□□ 0.14
HMGN1-211ENST00000471260 C7orf61Q8IZ16 206 aa15.95■□□□□ 0.14
HMGN1-211ENST00000471260 CPXCR1Q8N123 301 aa15.95■□□□□ 0.14
HMGN1-211ENST00000471260 DDX11Q96FC9 970 aa15.95■□□□□ 0.14
HMGN1-211ENST00000471260 ALPK3Q96L96 1907 aa15.95■□□□□ 0.14
HMGN1-211ENST00000471260 DNAJC25-GNG10A0A024R161 153 aa15.94■□□□□ 0.14
HMGN1-211ENST00000471260 BMP8BP34820 402 aa15.94■□□□□ 0.14
HMGN1-211ENST00000471260 RCSD1Q6JBY9 416 aa15.94■□□□□ 0.14
HMGN1-211ENST00000471260 MAMDC4Q6UXC1 1216 aa15.94■□□□□ 0.14
HMGN1-211ENST00000471260 ZNF467Q7Z7K2 595 aaPredicted RBP15.94■□□□□ 0.14
HMGN1-211ENST00000471260 SENP6Q9GZR1 1112 aaPredicted RBP15.94■□□□□ 0.14
HMGN1-211ENST00000471260 RNF41Q9H4P4 317 aaPredicted RBP15.94■□□□□ 0.14
HMGN1-211ENST00000471260 RAVER2Q9HCJ3 691 aaKnown RBP15.94■□□□□ 0.14
HMGN1-211ENST00000471260 INCENPQ9NQS7 918 aa15.94■□□□□ 0.14
HMGN1-211ENST00000471260 RIPK3Q9Y572 518 aa15.94■□□□□ 0.14
HMGN1-211ENST00000471260 FRMPD3Q5JV73 1810 aa15.94■□□□□ 0.14
HMGN1-211ENST00000471260 SYNGAP1Q96PV0 1343 aa15.94■□□□□ 0.14
HMGN1-211ENST00000471260 KBTBD13C9JR72 458 aa15.93■□□□□ 0.14
HMGN1-211ENST00000471260 MCCP23508 829 aa15.93■□□□□ 0.14
HMGN1-211ENST00000471260 IKQ13123 557 aaPredicted RBP15.93■□□□□ 0.14
HMGN1-211ENST00000471260 TKFCQ3LXA3 575 aa15.93■□□□□ 0.14
HMGN1-211ENST00000471260 PRAMEF19Q5SWL8 479 aa15.93■□□□□ 0.14
HMGN1-211ENST00000471260 AKNAD1Q5T1N1 836 aa15.93■□□□□ 0.14
HMGN1-211ENST00000471260 MFSD6Q6ZSS7 791 aa15.93■□□□□ 0.14
HMGN1-211ENST00000471260 TTC14Q96N46 770 aa15.93■□□□□ 0.14
HMGN1-211ENST00000471260 TOMM22Q9NS69 142 aa15.93■□□□□ 0.14
HMGN1-211ENST00000471260 CNPY2Q9Y2B0 182 aa15.93■□□□□ 0.14
HMGN1-211ENST00000471260 TACC3Q9Y6A5 838 aa15.93■□□□□ 0.14
HMGN1-211ENST00000471260 NMT2O60551 498 aa15.92■□□□□ 0.14
HMGN1-211ENST00000471260 RARBP10826 455 aa15.92■□□□□ 0.14
HMGN1-211ENST00000471260 TOP1P11387 765 aaKnown RBP15.92■□□□□ 0.14
HMGN1-211ENST00000471260 LRRC26Q2I0M4 334 aa15.92■□□□□ 0.14
HMGN1-211ENST00000471260 ANKRD35Q8N283 1001 aa15.92■□□□□ 0.14
HMGN1-211ENST00000471260 DCAF4Q8WV16 495 aa15.92■□□□□ 0.14
HMGN1-211ENST00000471260 GDF15Q99988 308 aa15.92■□□□□ 0.14
HMGN1-211ENST00000471260 DIAPH3Q9NSV4 1193 aa15.92■□□□□ 0.14
HMGN1-211ENST00000471260 ISY1Q9ULR0 285 aaKnown RBP15.92■□□□□ 0.14
HMGN1-211ENST00000471260 TRIOBPQ9H2D6 2365 aa15.92■□□□□ 0.14
HMGN1-211ENST00000471260 PLXNA1Q9UIW2 1896 aa15.91■□□□□ 0.14
HMGN1-211ENST00000471260 ZNF213O14771 459 aa15.91■□□□□ 0.14
HMGN1-211ENST00000471260 AKR1A1P14550 325 aa15.91■□□□□ 0.14
HMGN1-211ENST00000471260 GJC2Q5T442 439 aaPredicted RBP15.91■□□□□ 0.14
HMGN1-211ENST00000471260 ACAD9Q9H845 621 aa15.91■□□□□ 0.14
HMGN1-211ENST00000471260 ZNF865P0CJ78 1059 aaPredicted RBP15.9■□□□□ 0.14
HMGN1-211ENST00000471260 SLC4A3P48751 1232 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms