RNA–Protein interactions for RNA: ENST00000471193.1

FN1-217, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 496 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-217ENST00000471193 PPFIA3O75145 1194 aa13.47□□□□□ -0.25
FN1-217ENST00000471193 CETPP11597 493 aa13.47□□□□□ -0.25
FN1-217ENST00000471193 FDPSP14324 419 aaKnown RBP13.47□□□□□ -0.25
FN1-217ENST00000471193 GJB2P29033 226 aa13.47□□□□□ -0.25
FN1-217ENST00000471193 SSRP1Q08945 709 aaKnown RBP13.47□□□□□ -0.25
FN1-217ENST00000471193 MKRN3Q13064 507 aaKnown RBP13.47□□□□□ -0.25
FN1-217ENST00000471193 IKQ13123 557 aaPredicted RBP13.47□□□□□ -0.25
FN1-217ENST00000471193 GADL1Q6ZQY3 521 aa13.47□□□□□ -0.25
FN1-217ENST00000471193 FASTKD5Q7L8L6 764 aaKnown RBP13.47□□□□□ -0.25
FN1-217ENST00000471193 TRIM22Q8IYM9 498 aa13.47□□□□□ -0.25
FN1-217ENST00000471193 ADGRF4Q8IZF3 695 aa13.47□□□□□ -0.25
FN1-217ENST00000471193 CCDC82Q8N4S0 544 aa13.47□□□□□ -0.25
FN1-217ENST00000471193 SPRYD3Q8NCJ5 442 aa13.47□□□□□ -0.25
FN1-217ENST00000471193 CHURC1Q8WUH1 139 aa13.47□□□□□ -0.25
FN1-217ENST00000471193 MTMR8Q96EF0 704 aa13.47□□□□□ -0.25
FN1-217ENST00000471193 DDX11Q96FC9 970 aa13.47□□□□□ -0.25
FN1-217ENST00000471193 SLF1Q9BQI6 1058 aa13.47□□□□□ -0.25
FN1-217ENST00000471193 JMJD4Q9H9V9 463 aa13.47□□□□□ -0.25
FN1-217ENST00000471193 FBXO28Q9NVF7 368 aa13.47□□□□□ -0.25
FN1-217ENST00000471193 RBM27Q9P2N5 1060 aaKnown RBP13.47□□□□□ -0.25
FN1-217ENST00000471193 ORC3Q9UBD5 711 aaPredicted RBP13.47□□□□□ -0.25
FN1-217ENST00000471193 RLFQ13129 1914 aa13.47□□□□□ -0.25
FN1-217ENST00000471193 MYPNQ86TC9 1320 aa13.46□□□□□ -0.25
FN1-217ENST00000471193 RASSF10A6NK89 507 aa13.46□□□□□ -0.25
FN1-217ENST00000471193 USP17L15C9J2P7 530 aa13.46□□□□□ -0.25
FN1-217ENST00000471193 USP17L13C9JLJ4 530 aa13.46□□□□□ -0.25
FN1-217ENST00000471193 USP17L11C9JVI0 530 aa13.46□□□□□ -0.25
FN1-217ENST00000471193 USP17L18D6R9N7 530 aa13.46□□□□□ -0.25
FN1-217ENST00000471193 USP17L22D6RA61 530 aa13.46□□□□□ -0.25
FN1-217ENST00000471193 USP17L17D6RBQ6 530 aa13.46□□□□□ -0.25
FN1-217ENST00000471193 USP17L19D6RCP7 530 aa13.46□□□□□ -0.25
FN1-217ENST00000471193 USP17L20D6RJB6 530 aa13.46□□□□□ -0.25
FN1-217ENST00000471193 DEXIO95424 95 aa13.46□□□□□ -0.25
FN1-217ENST00000471193 HOXA7P31268 230 aaPredicted RBP13.46□□□□□ -0.25
FN1-217ENST00000471193 USP17L24Q0WX57 530 aa13.46□□□□□ -0.25
FN1-217ENST00000471193 PKN1Q16512 942 aa13.46□□□□□ -0.25
FN1-217ENST00000471193 GPAT2Q6NUI2 795 aa13.46□□□□□ -0.25
FN1-217ENST00000471193 CATSPERGQ6ZRH7 1159 aa13.46□□□□□ -0.25
FN1-217ENST00000471193 BRI3BPQ8WY22 251 aa13.46□□□□□ -0.25
FN1-217ENST00000471193 RRP36Q96EU6 259 aaKnown RBP13.46□□□□□ -0.25
FN1-217ENST00000471193 PPP1R9AQ9ULJ8 1098 aa13.46□□□□□ -0.25
FN1-217ENST00000471193 PRR12Q9ULL5 1215 aa13.46□□□□□ -0.25
FN1-217ENST00000471193 CCL15-CCL14A0A0B4J2E2 113 aa13.45□□□□□ -0.26
FN1-217ENST00000471193 hCG_1642624A0A1W2PR95 340 aa13.45□□□□□ -0.26
FN1-217ENST00000471193 TESPA1A2RU30 521 aaPredicted RBP13.45□□□□□ -0.26
FN1-217ENST00000471193 FLOT1O75955 427 aa13.45□□□□□ -0.26
FN1-217ENST00000471193 AKAP17AQ02040 695 aaKnown RBP13.45□□□□□ -0.26
FN1-217ENST00000471193 CDC37Q16543 378 aaPredicted RBP13.45□□□□□ -0.26
FN1-217ENST00000471193 CCL15Q16663 113 aa13.45□□□□□ -0.26
FN1-217ENST00000471193 PFKFB3Q16875 520 aaPredicted RBP13.45□□□□□ -0.26
FN1-217ENST00000471193 HOMER1Q86YM7 354 aa13.45□□□□□ -0.26
FN1-217ENST00000471193 CCDC102AQ96A19 550 aa13.45□□□□□ -0.26
FN1-217ENST00000471193 KIFC2Q96AC6 838 aa13.45□□□□□ -0.26
FN1-217ENST00000471193 PIGSQ96S52 555 aa13.45□□□□□ -0.26
FN1-217ENST00000471193 RANBP17Q9H2T7 1088 aaKnown RBP13.45□□□□□ -0.26
FN1-217ENST00000471193 KIF3AQ9Y496 699 aa13.45□□□□□ -0.26
FN1-217ENST00000471193 V9GY48 417 aaPredicted RBP13.45□□□□□ -0.26
FN1-217ENST00000471193 THSD7BQ9C0I4 1608 aa13.45□□□□□ -0.26
FN1-217ENST00000471193 MANSC4A6NHS7 340 aaPredicted RBP13.44□□□□□ -0.26
FN1-217ENST00000471193 SPDYE16A6NNV3 312 aaPredicted RBP13.44□□□□□ -0.26
FN1-217ENST00000471193 ZBTB5O15062 677 aa13.44□□□□□ -0.26
FN1-217ENST00000471193 SCG2P13521 617 aa13.44□□□□□ -0.26
FN1-217ENST00000471193 DSG3P32926 999 aa13.44□□□□□ -0.26
FN1-217ENST00000471193 DDIT3P35638 169 aa13.44□□□□□ -0.26
FN1-217ENST00000471193 PABPC4Q13310 644 aaKnown RBP eCLIP13.44□□□□□ -0.26
FN1-217ENST00000471193 ANKRD23Q86SG2 305 aa13.44□□□□□ -0.26
FN1-217ENST00000471193 PRPF38AQ8NAV1 312 aaKnown RBP13.44□□□□□ -0.26
FN1-217ENST00000471193 FAM184AQ8NB25 1140 aa13.44□□□□□ -0.26
FN1-217ENST00000471193 WASF1Q92558 559 aa13.44□□□□□ -0.26
FN1-217ENST00000471193 AIFM3Q96NN9 605 aa13.44□□□□□ -0.26
FN1-217ENST00000471193 CWC22Q9HCG8 908 aaKnown RBP13.44□□□□□ -0.26
FN1-217ENST00000471193 VAT1LQ9HCJ6 419 aa13.44□□□□□ -0.26
FN1-217ENST00000471193 SEC63Q9UGP8 760 aaKnown RBP13.44□□□□□ -0.26
FN1-217ENST00000471193 SLC45A1Q9Y2W3 748 aa13.44□□□□□ -0.26
FN1-217ENST00000471193 MYH6P13533 1939 aa13.43□□□□□ -0.26
FN1-217ENST00000471193 PNMA6FA0A0J9YX94 578 aa13.43□□□□□ -0.26
FN1-217ENST00000471193 BTBD19C9JJ37 291 aa13.43□□□□□ -0.26
FN1-217ENST00000471193 hCG_1984214I3L0E3 225 aa13.43□□□□□ -0.26
FN1-217ENST00000471193 PPP1R11O60927 126 aaPredicted RBP13.43□□□□□ -0.26
FN1-217ENST00000471193 FDX1P10109 184 aa13.43□□□□□ -0.26
FN1-217ENST00000471193 COG2Q14746 738 aa13.43□□□□□ -0.26
FN1-217ENST00000471193 QRICH1Q2TAL8 776 aa13.43□□□□□ -0.26
FN1-217ENST00000471193 WWC2Q6AWC2 1192 aa13.43□□□□□ -0.26
FN1-217ENST00000471193 CYP4F22Q6NT55 531 aa13.43□□□□□ -0.26
FN1-217ENST00000471193 ZNF713Q8N859 430 aaPredicted RBP13.43□□□□□ -0.26
FN1-217ENST00000471193 PIBF1Q8WXW3 757 aa13.43□□□□□ -0.26
FN1-217ENST00000471193 ATG4CQ96DT6 458 aa13.43□□□□□ -0.26
FN1-217ENST00000471193 ALG1Q9BT22 464 aa13.43□□□□□ -0.26
FN1-217ENST00000471193 SLC38A10Q9HBR0 1119 aa13.43□□□□□ -0.26
FN1-217ENST00000471193 ADAMTS5Q9UNA0 930 aa13.43□□□□□ -0.26
FN1-217ENST00000471193 VWA5AO00534 786 aa13.42□□□□□ -0.26
FN1-217ENST00000471193 SNAP25P60880 206 aa13.42□□□□□ -0.26
FN1-217ENST00000471193 IRX3P78415 501 aaPredicted RBP13.42□□□□□ -0.26
FN1-217ENST00000471193 SAMD1Q6SPF0 538 aaPredicted RBP13.42□□□□□ -0.26
FN1-217ENST00000471193 LBX2Q6XYB7 198 aa13.42□□□□□ -0.26
FN1-217ENST00000471193 PAXIP1Q6ZW49 1069 aaPredicted RBP13.42□□□□□ -0.26
FN1-217ENST00000471193 FAM43AQ8N2R8 423 aa13.42□□□□□ -0.26
FN1-217ENST00000471193 REPS2Q8NFH8 660 aa13.42□□□□□ -0.26
FN1-217ENST00000471193 GPKOWQ92917 476 aaPredicted RBP eCLIP13.42□□□□□ -0.26
FN1-217ENST00000471193 SHISA4Q96DD7 197 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms