RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 CCDC83Q8IWF9 413 aa6.62□□□□□ -1.35
HDAC8-216ENST00000470998 LINC00528Q8N1L1 170 aa6.62□□□□□ -1.35
HDAC8-216ENST00000470998 SMARCC2Q8TAQ2 1214 aa6.62□□□□□ -1.35
HDAC8-216ENST00000470998 CDCA5Q96FF9 252 aa6.62□□□□□ -1.35
HDAC8-216ENST00000470998 GZF1Q9H116 711 aaPredicted RBP6.62□□□□□ -1.35
HDAC8-216ENST00000470998 CNNM2Q9H8M5 875 aa6.62□□□□□ -1.35
HDAC8-216ENST00000470998 CD209Q9NNX6 404 aa6.62□□□□□ -1.35
HDAC8-216ENST00000470998 CYLDQ9NQC7 956 aa6.62□□□□□ -1.35
HDAC8-216ENST00000470998 GNL3LQ9NVN8 582 aaKnown RBP6.62□□□□□ -1.35
HDAC8-216ENST00000470998 SAGE1Q9NXZ1 904 aa6.62□□□□□ -1.35
HDAC8-216ENST00000470998 TPCN1Q9ULQ1 816 aa6.62□□□□□ -1.35
HDAC8-216ENST00000470998 MTMR6Q9Y217 621 aa6.62□□□□□ -1.35
HDAC8-216ENST00000470998 FAM155AB1AL88 458 aaPredicted RBP6.61□□□□□ -1.35
HDAC8-216ENST00000470998 ADM5C9JUS6 153 aa6.61□□□□□ -1.35
HDAC8-216ENST00000470998 WNT10BO00744 389 aa6.61□□□□□ -1.35
HDAC8-216ENST00000470998 AOC2O75106 756 aa6.61□□□□□ -1.35
HDAC8-216ENST00000470998 CDKL5O76039 1030 aa6.61□□□□□ -1.35
HDAC8-216ENST00000470998 CAVIN2O95810 425 aa6.61□□□□□ -1.35
HDAC8-216ENST00000470998 MYCP01106 439 aaPredicted RBP6.61□□□□□ -1.35
HDAC8-216ENST00000470998 MCM5P33992 734 aa6.61□□□□□ -1.35
HDAC8-216ENST00000470998 NASPP49321 788 aaPredicted RBP6.61□□□□□ -1.35
HDAC8-216ENST00000470998 ZNF157P51786 506 aaPredicted RBP6.61□□□□□ -1.35
HDAC8-216ENST00000470998 EXOSC10Q01780 885 aaKnown RBP6.61□□□□□ -1.35
HDAC8-216ENST00000470998 CBLBQ13191 982 aa6.61□□□□□ -1.35
HDAC8-216ENST00000470998 UBE4AQ14139 1066 aa6.61□□□□□ -1.35
HDAC8-216ENST00000470998 UVSSAQ2YD98 709 aa6.61□□□□□ -1.35
HDAC8-216ENST00000470998 CPLX2Q6PUV4 134 aaKnown RBP6.61□□□□□ -1.35
HDAC8-216ENST00000470998 NOL8Q76FK4 1167 aaKnown RBP6.61□□□□□ -1.35
HDAC8-216ENST00000470998 TRIM46Q7Z4K8 759 aa6.61□□□□□ -1.35
HDAC8-216ENST00000470998 ZNF804AQ7Z570 1209 aa6.61□□□□□ -1.35
HDAC8-216ENST00000470998 CERS3Q8IU89 383 aa6.61□□□□□ -1.35
HDAC8-216ENST00000470998 APOBEC3FQ8IUX4 373 aaKnown RBP6.61□□□□□ -1.35
HDAC8-216ENST00000470998 NCOA7Q8NI08 942 aa6.61□□□□□ -1.35
HDAC8-216ENST00000470998 TRIM44Q96DX7 344 aaPredicted RBP6.61□□□□□ -1.35
HDAC8-216ENST00000470998 EDC3Q96F86 508 aaKnown RBP6.61□□□□□ -1.35
HDAC8-216ENST00000470998 ZNF594Q96JF6 807 aaPredicted RBP6.61□□□□□ -1.35
HDAC8-216ENST00000470998 TMEM87BQ96K49 555 aa6.61□□□□□ -1.35
HDAC8-216ENST00000470998 TRIM47Q96LD4 638 aa6.61□□□□□ -1.35
HDAC8-216ENST00000470998 PUS3Q9BZE2 481 aaKnown RBP6.61□□□□□ -1.35
HDAC8-216ENST00000470998 NACAP1Q9BZK3 213 aa6.61□□□□□ -1.35
HDAC8-216ENST00000470998 CFAP45Q9UL16 551 aa6.61□□□□□ -1.35
HDAC8-216ENST00000470998 PPP2R3BQ9Y5P8 575 aa6.61□□□□□ -1.35
HDAC8-216ENST00000470998 TRPM7Q96QT4 1865 aa6.61□□□□□ -1.35
HDAC8-216ENST00000470998 COL4A1P02462 1669 aa6.61□□□□□ -1.35
HDAC8-216ENST00000470998 COL1A1P02452 1464 aaPredicted RBP6.6□□□□□ -1.35
HDAC8-216ENST00000470998 IRS2Q9Y4H2 1338 aa6.6□□□□□ -1.35
HDAC8-216ENST00000470998 ARAP2Q8WZ64 1704 aa6.6□□□□□ -1.35
HDAC8-216ENST00000470998 VPS37CA5D8V6 355 aaPredicted RBP6.6□□□□□ -1.35
HDAC8-216ENST00000470998 UNCXA6NJT0 531 aa6.6□□□□□ -1.35
HDAC8-216ENST00000470998 E7EWF7 191 aa6.6□□□□□ -1.35
HDAC8-216ENST00000470998 ZNF213O14771 459 aa6.6□□□□□ -1.35
HDAC8-216ENST00000470998 GPAA1O43292 621 aa6.6□□□□□ -1.35
HDAC8-216ENST00000470998 IL1R1P14778 569 aa6.6□□□□□ -1.35
HDAC8-216ENST00000470998 MCAMP43121 646 aa6.6□□□□□ -1.35
HDAC8-216ENST00000470998 ZAP70P43403 619 aa6.6□□□□□ -1.35
HDAC8-216ENST00000470998 GTF2IP78347 998 aa6.6□□□□□ -1.35
HDAC8-216ENST00000470998 RELBQ01201 579 aa6.6□□□□□ -1.35
HDAC8-216ENST00000470998 PPP2R5BQ15173 497 aa6.6□□□□□ -1.35
HDAC8-216ENST00000470998 CCDC102BQ68D86 513 aa6.6□□□□□ -1.35
HDAC8-216ENST00000470998 Q6ZUG5 572 aa6.6□□□□□ -1.35
HDAC8-216ENST00000470998 TXNRD3Q86VQ6 643 aa6.6□□□□□ -1.35
HDAC8-216ENST00000470998 GPT2Q8TD30 523 aa6.6□□□□□ -1.35
HDAC8-216ENST00000470998 BRF1Q92994 677 aa6.6□□□□□ -1.35
HDAC8-216ENST00000470998 OSBP2Q969R2 916 aa6.6□□□□□ -1.35
HDAC8-216ENST00000470998 ZFP42Q96MM3 310 aa6.6□□□□□ -1.35
HDAC8-216ENST00000470998 PPP1R9BQ96SB3 815 aa6.6□□□□□ -1.35
HDAC8-216ENST00000470998 RNF41Q9H4P4 317 aaPredicted RBP6.6□□□□□ -1.35
HDAC8-216ENST00000470998 DDX19AQ9NUU7 478 aaKnown RBP6.6□□□□□ -1.35
HDAC8-216ENST00000470998 DOLKQ9UPQ8 538 aa6.6□□□□□ -1.35
HDAC8-216ENST00000470998 TAF1P21675 1872 aa6.6□□□□□ -1.35
HDAC8-216ENST00000470998 NID2Q14112 1375 aa6.59□□□□□ -1.35
HDAC8-216ENST00000470998 SALL1Q9NSC2 1324 aa6.59□□□□□ -1.35
HDAC8-216ENST00000470998 H3BQV1 296 aa6.59□□□□□ -1.35
HDAC8-216ENST00000470998 MYO1BO43795 1136 aa6.59□□□□□ -1.35
HDAC8-216ENST00000470998 MAN1A2O60476 641 aa6.59□□□□□ -1.35
HDAC8-216ENST00000470998 LARGE1O95461 756 aa6.59□□□□□ -1.35
HDAC8-216ENST00000470998 PDE6AP16499 860 aa6.59□□□□□ -1.35
HDAC8-216ENST00000470998 ADORA1P30542 326 aa6.59□□□□□ -1.35
HDAC8-216ENST00000470998 KIF23Q02241 960 aaPredicted RBP6.59□□□□□ -1.35
HDAC8-216ENST00000470998 ST3GAL1Q11201 340 aa6.59□□□□□ -1.35
HDAC8-216ENST00000470998 SART3Q15020 963 aaKnown RBP6.59□□□□□ -1.35
HDAC8-216ENST00000470998 CAVIN4Q5BKX8 364 aa6.59□□□□□ -1.35
HDAC8-216ENST00000470998 SLC9C2Q5TAH2 1124 aa6.59□□□□□ -1.35
HDAC8-216ENST00000470998 GIMAP6Q6P9H5 292 aa6.59□□□□□ -1.35
HDAC8-216ENST00000470998 ARMC9Q7Z3E5 817 aa6.59□□□□□ -1.35
HDAC8-216ENST00000470998 MB21D2Q8IYB1 491 aaPredicted RBP6.59□□□□□ -1.35
HDAC8-216ENST00000470998 SPATA5Q8NB90 893 aa6.59□□□□□ -1.35
HDAC8-216ENST00000470998 ABHD8Q96I13 439 aa6.59□□□□□ -1.35
HDAC8-216ENST00000470998 ZBED3Q96IU2 234 aaPredicted RBP6.59□□□□□ -1.35
HDAC8-216ENST00000470998 ZNF396Q96N95 335 aaPredicted RBP6.59□□□□□ -1.35
HDAC8-216ENST00000470998 SEC62Q99442 399 aaKnown RBP6.59□□□□□ -1.35
HDAC8-216ENST00000470998 KRT23Q9C075 422 aa6.59□□□□□ -1.35
HDAC8-216ENST00000470998 TSPY26PQ9H489 355 aa6.59□□□□□ -1.35
HDAC8-216ENST00000470998 ASTN2O75129 1339 aaPredicted RBP6.58□□□□□ -1.36
HDAC8-216ENST00000470998 FAM205AQ6ZU69 1335 aa6.58□□□□□ -1.36
HDAC8-216ENST00000470998 GOLGA6L4A6NEF3 574 aa6.58□□□□□ -1.36
HDAC8-216ENST00000470998 M0R2C6 588 aa6.58□□□□□ -1.36
HDAC8-216ENST00000470998 CTAGE5O15320 804 aa6.58□□□□□ -1.36
HDAC8-216ENST00000470998 FGAP02671 866 aa6.58□□□□□ -1.36
HDAC8-216ENST00000470998 ADH1AP07327 375 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms