RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 GATA6Q92908 595 aa5.79□□□□□ -1.48
PRPF3-204ENST00000470824 TP53INP1Q96A56 240 aa5.79□□□□□ -1.48
PRPF3-204ENST00000470824 EXOC2Q96KP1 924 aa5.79□□□□□ -1.48
PRPF3-204ENST00000470824 CCDC140Q96MF4 163 aa5.79□□□□□ -1.48
PRPF3-204ENST00000470824 DSCC1Q9BVC3 393 aa5.79□□□□□ -1.48
PRPF3-204ENST00000470824 LGR4Q9BXB1 951 aa5.79□□□□□ -1.48
PRPF3-204ENST00000470824 NOL6Q9H6R4 1146 aaKnown RBP5.79□□□□□ -1.48
PRPF3-204ENST00000470824 C7orf69Q9H7B7 122 aa5.79□□□□□ -1.48
PRPF3-204ENST00000470824 GFOD1Q9NXC2 390 aa5.79□□□□□ -1.48
PRPF3-204ENST00000470824 SF3B6Q9Y3B4 125 aaKnown RBP5.79□□□□□ -1.48
PRPF3-204ENST00000470824 MRPS23Q9Y3D9 190 aaKnown RBP5.79□□□□□ -1.48
PRPF3-204ENST00000470824 DNAJC25-GNG10A0A024R161 153 aa5.78□□□□□ -1.48
PRPF3-204ENST00000470824 GNAT3A8MTJ3 354 aa5.78□□□□□ -1.48
PRPF3-204ENST00000470824 PLD2O14939 933 aa5.78□□□□□ -1.48
PRPF3-204ENST00000470824 SIGLEC6O43699 453 aa5.78□□□□□ -1.48
PRPF3-204ENST00000470824 RFPL3O75679 317 aa5.78□□□□□ -1.48
PRPF3-204ENST00000470824 CAPNS1P04632 268 aa5.78□□□□□ -1.48
PRPF3-204ENST00000470824 FURINP09958 794 aa5.78□□□□□ -1.48
PRPF3-204ENST00000470824 ADMP35318 185 aa5.78□□□□□ -1.48
PRPF3-204ENST00000470824 SUMO1P63165 101 aaKnown RBP5.78□□□□□ -1.48
PRPF3-204ENST00000470824 IGBP1P78318 339 aa5.78□□□□□ -1.48
PRPF3-204ENST00000470824 NMIQ13287 307 aaPredicted RBP5.78□□□□□ -1.48
PRPF3-204ENST00000470824 GRB10Q13322 594 aa5.78□□□□□ -1.48
PRPF3-204ENST00000470824 CLEC16AQ2KHT3 1053 aa5.78□□□□□ -1.48
PRPF3-204ENST00000470824 DALRD3Q5D0E6 543 aaKnown RBP5.78□□□□□ -1.48
PRPF3-204ENST00000470824 YOD1Q5VVQ6 348 aaPredicted RBP5.78□□□□□ -1.48
PRPF3-204ENST00000470824 DUSP27Q5VZP5 1158 aa5.78□□□□□ -1.48
PRPF3-204ENST00000470824 TMC3Q7Z5M5 1100 aa5.78□□□□□ -1.48
PRPF3-204ENST00000470824 PIWIL2Q8TC59 973 aaKnown RBP5.78□□□□□ -1.48
PRPF3-204ENST00000470824 ENOX1Q8TC92 643 aaKnown RBP5.78□□□□□ -1.48
PRPF3-204ENST00000470824 BTN2A2Q8WVV5 523 aa5.78□□□□□ -1.48
PRPF3-204ENST00000470824 Q96M66 194 aa5.78□□□□□ -1.48
PRPF3-204ENST00000470824 HEXIM2Q96MH2 286 aaKnown RBP5.78□□□□□ -1.48
PRPF3-204ENST00000470824 CHST7Q9NS84 486 aa5.78□□□□□ -1.48
PRPF3-204ENST00000470824 hCG_2014768A0A024R1R8 64 aa5.77□□□□□ -1.49
PRPF3-204ENST00000470824 TBX1O43435 398 aa5.77□□□□□ -1.49
PRPF3-204ENST00000470824 ZNF865P0CJ78 1059 aaPredicted RBP5.77□□□□□ -1.49
PRPF3-204ENST00000470824 HOXC12P31275 282 aa5.77□□□□□ -1.49
PRPF3-204ENST00000470824 GRIA2P42262 883 aa5.77□□□□□ -1.49
PRPF3-204ENST00000470824 MASP1P48740 699 aa5.77□□□□□ -1.49
PRPF3-204ENST00000470824 AMPD2Q01433 879 aa5.77□□□□□ -1.49
PRPF3-204ENST00000470824 C21orf62-AS1Q17RA5 79 aa5.77□□□□□ -1.49
PRPF3-204ENST00000470824 FNDC3BQ53EP0 1204 aaKnown RBP5.77□□□□□ -1.49
PRPF3-204ENST00000470824 RNF43Q68DV7 783 aa5.77□□□□□ -1.49
PRPF3-204ENST00000470824 GTF2IRD2BQ6EKJ0 949 aa5.77□□□□□ -1.49
PRPF3-204ENST00000470824 GTF2IRD2Q86UP8 949 aa5.77□□□□□ -1.49
PRPF3-204ENST00000470824 MFSD4AQ8N468 514 aa5.77□□□□□ -1.49
PRPF3-204ENST00000470824 FBXL6Q8N531 539 aa5.77□□□□□ -1.49
PRPF3-204ENST00000470824 NINJ1Q92982 152 aa5.77□□□□□ -1.49
PRPF3-204ENST00000470824 OSBP2Q969R2 916 aa5.77□□□□□ -1.49
PRPF3-204ENST00000470824 GPATCH3Q96I76 525 aa5.77□□□□□ -1.49
PRPF3-204ENST00000470824 ZDHHC15Q96MV8 337 aa5.77□□□□□ -1.49
PRPF3-204ENST00000470824 IER2Q9BTL4 223 aa5.77□□□□□ -1.49
PRPF3-204ENST00000470824 MRPL4Q9BYD3 311 aaKnown RBP5.77□□□□□ -1.49
PRPF3-204ENST00000470824 NCOA5Q9HCD5 579 aaKnown RBP5.77□□□□□ -1.49
PRPF3-204ENST00000470824 NOP58Q9Y2X3 529 aaKnown RBP5.77□□□□□ -1.49
PRPF3-204ENST00000470824 COL4A3BPQ9Y5P4 624 aa5.77□□□□□ -1.49
PRPF3-204ENST00000470824 FAM170BA6NMN3 283 aa5.76□□□□□ -1.49
PRPF3-204ENST00000470824 FAM155AB1AL88 458 aaPredicted RBP5.76□□□□□ -1.49
PRPF3-204ENST00000470824 PRAMEF1O95521 474 aa5.76□□□□□ -1.49
PRPF3-204ENST00000470824 GSNP06396 782 aa5.76□□□□□ -1.49
PRPF3-204ENST00000470824 ITIH2P19823 946 aa5.76□□□□□ -1.49
PRPF3-204ENST00000470824 ANAPC15P60006 121 aa5.76□□□□□ -1.49
PRPF3-204ENST00000470824 POU4F1Q01851 419 aa5.76□□□□□ -1.49
PRPF3-204ENST00000470824 TNK2Q07912 1038 aa5.76□□□□□ -1.49
PRPF3-204ENST00000470824 PABPC4Q13310 644 aaKnown RBP eCLIP5.76□□□□□ -1.491e-11■■■□□ 16.7
PRPF3-204ENST00000470824 CBX2Q14781 532 aaPredicted RBP5.76□□□□□ -1.49
PRPF3-204ENST00000470824 CWF19L1Q69YN2 538 aaKnown RBP5.76□□□□□ -1.49
PRPF3-204ENST00000470824 PRR23CQ6ZRP0 262 aa5.76□□□□□ -1.49
PRPF3-204ENST00000470824 ZNF765Q7L2R6 523 aa5.76□□□□□ -1.49
PRPF3-204ENST00000470824 NIM1KQ8IY84 436 aa5.76□□□□□ -1.49
PRPF3-204ENST00000470824 Q8N3U1 123 aa5.76□□□□□ -1.49
PRPF3-204ENST00000470824 KCTD13Q8WZ19 329 aa5.76□□□□□ -1.49
PRPF3-204ENST00000470824 MFSD3Q96ES6 412 aa5.76□□□□□ -1.49
PRPF3-204ENST00000470824 MFSD14AQ96MC6 490 aa5.76□□□□□ -1.49
PRPF3-204ENST00000470824 CYP26B1Q9NR63 512 aa5.76□□□□□ -1.49
PRPF3-204ENST00000470824 CAPN6Q9Y6Q1 641 aa5.76□□□□□ -1.49
PRPF3-204ENST00000470824 PRR33A8MZF0 331 aa5.75□□□□□ -1.49
PRPF3-204ENST00000470824 DLX3O60479 287 aa5.75□□□□□ -1.49
PRPF3-204ENST00000470824 VAMP4O75379 141 aa5.75□□□□□ -1.49
PRPF3-204ENST00000470824 RAPGEF3O95398 923 aa5.75□□□□□ -1.49
PRPF3-204ENST00000470824 CPP00450 1065 aa5.75□□□□□ -1.49
PRPF3-204ENST00000470824 SNRPB2P08579 225 aaKnown RBP5.75□□□□□ -1.49
PRPF3-204ENST00000470824 KCNJ6P48051 423 aa5.75□□□□□ -1.49
PRPF3-204ENST00000470824 MAP4K2Q12851 820 aa5.75□□□□□ -1.49
PRPF3-204ENST00000470824 ARHGAP27Q6ZUM4 889 aa5.75□□□□□ -1.49
PRPF3-204ENST00000470824 DHX37Q8IY37 1157 aaKnown RBP5.75□□□□□ -1.49
PRPF3-204ENST00000470824 ZNF655Q8N720 491 aaPredicted RBP5.75□□□□□ -1.49
PRPF3-204ENST00000470824 DAGLBQ8NCG7 672 aa5.75□□□□□ -1.49
PRPF3-204ENST00000470824 METTL22Q9BUU2 404 aaPredicted RBP5.75□□□□□ -1.49
PRPF3-204ENST00000470824 GPR62Q9BZJ7 368 aa5.75□□□□□ -1.49
PRPF3-204ENST00000470824 NKX2-4Q9H2Z4 354 aa5.75□□□□□ -1.49
PRPF3-204ENST00000470824 TRIT1Q9H3H1 467 aaKnown RBP5.75□□□□□ -1.49
PRPF3-204ENST00000470824 PCDH12Q9NPG4 1184 aa5.75□□□□□ -1.49
PRPF3-204ENST00000470824 GPATCH2Q9NW75 528 aa5.75□□□□□ -1.49
PRPF3-204ENST00000470824 GPR55Q9Y2T6 319 aaPredicted RBP5.75□□□□□ -1.49
PRPF3-204ENST00000470824 H0Y8X5 98 aa5.74□□□□□ -1.49
PRPF3-204ENST00000470824 MEIS1O00470 390 aa5.74□□□□□ -1.49
PRPF3-204ENST00000470824 F13BP05160 661 aa5.74□□□□□ -1.49
PRPF3-204ENST00000470824 NOP2P46087 812 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms