RNA–Protein interactions for RNA: ENST00000470776.1

LMCD1-207, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-207ENST00000470776 CALML3P27482 149 aa10.25□□□□□ -0.77
LMCD1-207ENST00000470776 FOSBP53539 338 aa10.25□□□□□ -0.77
LMCD1-207ENST00000470776 USP14P54578 494 aa10.25□□□□□ -0.77
LMCD1-207ENST00000470776 KRT85P78386 507 aa10.25□□□□□ -0.77
LMCD1-207ENST00000470776 DNM1Q05193 864 aaKnown RBP10.25□□□□□ -0.77
LMCD1-207ENST00000470776 CSPP1Q1MSJ5 1256 aa10.25□□□□□ -0.77
LMCD1-207ENST00000470776 CCDC96Q2M329 555 aa10.25□□□□□ -0.77
LMCD1-207ENST00000470776 SH3D19Q5HYK7 790 aa10.25□□□□□ -0.77
LMCD1-207ENST00000470776 MYSM1Q5VVJ2 828 aa10.25□□□□□ -0.77
LMCD1-207ENST00000470776 WWC2Q6AWC2 1192 aa10.25□□□□□ -0.77
LMCD1-207ENST00000470776 MCTP1Q6DN14 999 aa10.25□□□□□ -0.77
LMCD1-207ENST00000470776 TYW1BQ6NUM6 668 aa10.25□□□□□ -0.77
LMCD1-207ENST00000470776 FAM173BQ6P4H8 233 aa10.25□□□□□ -0.77
LMCD1-207ENST00000470776 FAM160B2Q86V87 743 aa10.25□□□□□ -0.77
LMCD1-207ENST00000470776 TEX2Q8IWB9 1127 aa10.25□□□□□ -0.77
LMCD1-207ENST00000470776 DIS3L2Q8IYB7 885 aaKnown RBP10.25□□□□□ -0.77
LMCD1-207ENST00000470776 CCDC148Q8NFR7 591 aa10.25□□□□□ -0.77
LMCD1-207ENST00000470776 CCDC12Q8WUD4 166 aaPredicted RBP10.25□□□□□ -0.77
LMCD1-207ENST00000470776 CHURC1Q8WUH1 139 aa10.25□□□□□ -0.77
LMCD1-207ENST00000470776 CHAMP1Q96JM3 812 aa10.25□□□□□ -0.77
LMCD1-207ENST00000470776 PIGSQ96S52 555 aa10.25□□□□□ -0.77
LMCD1-207ENST00000470776 SCAND2PQ9GZW5 306 aaPredicted RBP10.25□□□□□ -0.77
LMCD1-207ENST00000470776 ZMYND12Q9H0C1 365 aa10.25□□□□□ -0.77
LMCD1-207ENST00000470776 RRAGCQ9HB90 399 aa10.25□□□□□ -0.77
LMCD1-207ENST00000470776 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.25□□□□□ -0.77
LMCD1-207ENST00000470776 CFAP45Q9UL16 551 aa10.25□□□□□ -0.77
LMCD1-207ENST00000470776 KCNJ14Q9UNX9 436 aa10.25□□□□□ -0.77
LMCD1-207ENST00000470776 ELP1O95163 1332 aa10.25□□□□□ -0.77
LMCD1-207ENST00000470776 USP17L10C9JJH3 530 aa10.24□□□□□ -0.77
LMCD1-207ENST00000470776 WDR46O15213 610 aaKnown RBP10.24□□□□□ -0.77
LMCD1-207ENST00000470776 KRT2P35908 639 aa10.24□□□□□ -0.77
LMCD1-207ENST00000470776 SLC16A2P36021 539 aa10.24□□□□□ -0.77
LMCD1-207ENST00000470776 IREB2P48200 963 aaKnown RBP10.24□□□□□ -0.77
LMCD1-207ENST00000470776 NLRP5P59047 1200 aa10.24□□□□□ -0.77
LMCD1-207ENST00000470776 LDLRAD1Q5T700 205 aa10.24□□□□□ -0.77
LMCD1-207ENST00000470776 SYDE2Q5VT97 1194 aa10.24□□□□□ -0.77
LMCD1-207ENST00000470776 PPP1R18Q6NYC8 613 aa10.24□□□□□ -0.77
LMCD1-207ENST00000470776 DLK2Q6UY11 383 aa10.24□□□□□ -0.77
LMCD1-207ENST00000470776 CCDC84Q86UT8 332 aaPredicted RBP10.24□□□□□ -0.77
LMCD1-207ENST00000470776 NOSTRINQ8IVI9 506 aa10.24□□□□□ -0.77
LMCD1-207ENST00000470776 ZNF280CQ8ND82 737 aa10.24□□□□□ -0.77
LMCD1-207ENST00000470776 ZKSCAN4Q969J2 545 aaPredicted RBP10.24□□□□□ -0.77
LMCD1-207ENST00000470776 ZNF396Q96N95 335 aaPredicted RBP10.24□□□□□ -0.77
LMCD1-207ENST00000470776 GRPEL1Q9HAV7 217 aa10.24□□□□□ -0.77
LMCD1-207ENST00000470776 VAT1LQ9HCJ6 419 aa10.24□□□□□ -0.77
LMCD1-207ENST00000470776 PICK1Q9NRD5 415 aa10.24□□□□□ -0.77
LMCD1-207ENST00000470776 EMILIN3Q9NT22 766 aa10.24□□□□□ -0.77
LMCD1-207ENST00000470776 POLR3EQ9NVU0 708 aa10.24□□□□□ -0.77
LMCD1-207ENST00000470776 RTEL1Q9NZ71 1219 aa10.24□□□□□ -0.77
LMCD1-207ENST00000470776 SEC63Q9UGP8 760 aaKnown RBP10.24□□□□□ -0.77
LMCD1-207ENST00000470776 FEM1BQ9UK73 627 aa10.24□□□□□ -0.77
LMCD1-207ENST00000470776 PCDHA4Q9UN74 947 aa10.24□□□□□ -0.77
LMCD1-207ENST00000470776 CNPY2Q9Y2B0 182 aa10.24□□□□□ -0.77
LMCD1-207ENST00000470776 AFG3L2Q9Y4W6 797 aa10.24□□□□□ -0.77
LMCD1-207ENST00000470776 SNCAIPQ9Y6H5 919 aa10.24□□□□□ -0.77
LMCD1-207ENST00000470776 MORC2Q9Y6X9 1032 aaPredicted RBP10.24□□□□□ -0.77
LMCD1-207ENST00000470776 TMEM232C9JQI7 657 aa10.23□□□□□ -0.77
LMCD1-207ENST00000470776 PPP1R11O60927 126 aaPredicted RBP10.23□□□□□ -0.77
LMCD1-207ENST00000470776 YEATS4O95619 227 aa10.23□□□□□ -0.77
LMCD1-207ENST00000470776 NF2P35240 595 aa10.23□□□□□ -0.77
LMCD1-207ENST00000470776 NASPP49321 788 aaPredicted RBP10.23□□□□□ -0.77
LMCD1-207ENST00000470776 BACE1P56817 501 aa10.23□□□□□ -0.77
LMCD1-207ENST00000470776 SPP2Q13103 211 aa10.23□□□□□ -0.77
LMCD1-207ENST00000470776 EAPPQ56P03 285 aaPredicted RBP10.23□□□□□ -0.77
LMCD1-207ENST00000470776 LDHDQ86WU2 507 aa10.23□□□□□ -0.77
LMCD1-207ENST00000470776 ANKRD13AQ8IZ07 590 aa10.23□□□□□ -0.77
LMCD1-207ENST00000470776 BLIDQ8IZY5 108 aa10.23□□□□□ -0.77
LMCD1-207ENST00000470776 OXER1Q8TDS5 423 aa10.23□□□□□ -0.77
LMCD1-207ENST00000470776 USP28Q96RU2 1077 aa10.23□□□□□ -0.77
LMCD1-207ENST00000470776 NUP88Q99567 741 aaPredicted RBP10.23□□□□□ -0.77
LMCD1-207ENST00000470776 BRMS1Q9HCU9 246 aa10.23□□□□□ -0.77
LMCD1-207ENST00000470776 TFIP11Q9UBB9 837 aaKnown RBP10.23□□□□□ -0.77
LMCD1-207ENST00000470776 PRR12Q9ULL5 1215 aa10.23□□□□□ -0.77
LMCD1-207ENST00000470776 PRPF40AO75400 957 aaKnown RBP10.22□□□□□ -0.77
LMCD1-207ENST00000470776 POTEIP0CG38 1075 aa10.22□□□□□ -0.77
LMCD1-207ENST00000470776 POTEJP0CG39 1038 aa10.22□□□□□ -0.77
LMCD1-207ENST00000470776 FDX1P10109 184 aa10.22□□□□□ -0.77
LMCD1-207ENST00000470776 XRCC6P12956 609 aaKnown RBP eCLIP10.22□□□□□ -0.77
LMCD1-207ENST00000470776 GNA11P29992 359 aa10.22□□□□□ -0.77
LMCD1-207ENST00000470776 TRAPPC10P48553 1259 aa10.22□□□□□ -0.77
LMCD1-207ENST00000470776 TOB1P50616 345 aaPredicted RBP10.22□□□□□ -0.77
LMCD1-207ENST00000470776 STAT2P52630 851 aa10.22□□□□□ -0.77
LMCD1-207ENST00000470776 PPATQ06203 517 aa10.22□□□□□ -0.77
LMCD1-207ENST00000470776 TRAF1Q13077 416 aa10.22□□□□□ -0.77
LMCD1-207ENST00000470776 NR5A1Q13285 461 aa10.22□□□□□ -0.77
LMCD1-207ENST00000470776 VGLL4Q14135 290 aa10.22□□□□□ -0.77
LMCD1-207ENST00000470776 CDC37Q16543 378 aaPredicted RBP10.22□□□□□ -0.77
LMCD1-207ENST00000470776 QRICH1Q2TAL8 776 aa10.22□□□□□ -0.77
LMCD1-207ENST00000470776 RILPL1Q5EBL4 403 aa10.22□□□□□ -0.77
LMCD1-207ENST00000470776 FAM83BQ5T0W9 1011 aa10.22□□□□□ -0.77
LMCD1-207ENST00000470776 HEATR3Q7Z4Q2 680 aa10.22□□□□□ -0.77
LMCD1-207ENST00000470776 HOMER1Q86YM7 354 aa10.22□□□□□ -0.77
LMCD1-207ENST00000470776 SPICE1Q8N0Z3 855 aa10.22□□□□□ -0.77
LMCD1-207ENST00000470776 RBM46Q8TBY0 533 aaKnown RBP10.22□□□□□ -0.77
LMCD1-207ENST00000470776 LEO1Q8WVC0 666 aaPredicted RBP10.22□□□□□ -0.77
LMCD1-207ENST00000470776 PIBF1Q8WXW3 757 aa10.22□□□□□ -0.77
LMCD1-207ENST00000470776 GPKOWQ92917 476 aaPredicted RBP eCLIP10.22□□□□□ -0.77
LMCD1-207ENST00000470776 FEZ1Q99689 392 aa10.22□□□□□ -0.77
LMCD1-207ENST00000470776 GLT8D2Q9H1C3 349 aa10.22□□□□□ -0.77
LMCD1-207ENST00000470776 RANBP17Q9H2T7 1088 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms