RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 FEM1BQ9UK73 627 aa17.43■□□□□ 0.38
COL4A5-203ENST00000470339 CFAP45Q9UL16 551 aa17.43■□□□□ 0.38
COL4A5-203ENST00000470339 KCNJ14Q9UNX9 436 aa17.43■□□□□ 0.38
COL4A5-203ENST00000470339 TMEM232C9JQI7 657 aa17.42■□□□□ 0.38
COL4A5-203ENST00000470339 STXBP3O00186 592 aa17.42■□□□□ 0.38
COL4A5-203ENST00000470339 ZBTB5O15062 677 aa17.42■□□□□ 0.38
COL4A5-203ENST00000470339 KRT2P35908 639 aa17.42■□□□□ 0.38
COL4A5-203ENST00000470339 STAT2P52630 851 aa17.42■□□□□ 0.38
COL4A5-203ENST00000470339 NLRP5P59047 1200 aa17.42■□□□□ 0.38
COL4A5-203ENST00000470339 DNM1Q05193 864 aaKnown RBP17.42■□□□□ 0.38
COL4A5-203ENST00000470339 TRAF1Q13077 416 aa17.42■□□□□ 0.38
COL4A5-203ENST00000470339 SPP2Q13103 211 aa17.42■□□□□ 0.38
COL4A5-203ENST00000470339 GNL2Q13823 731 aaKnown RBP17.42■□□□□ 0.38
COL4A5-203ENST00000470339 SYDE2Q5VT97 1194 aa17.42■□□□□ 0.38
COL4A5-203ENST00000470339 WWC2Q6AWC2 1192 aa17.42■□□□□ 0.38
COL4A5-203ENST00000470339 PPP1R18Q6NYC8 613 aa17.42■□□□□ 0.38
COL4A5-203ENST00000470339 ARMC9Q7Z3E5 817 aa17.42■□□□□ 0.38
COL4A5-203ENST00000470339 DIS3L2Q8IYB7 885 aaKnown RBP17.42■□□□□ 0.38
COL4A5-203ENST00000470339 ANKRD13AQ8IZ07 590 aa17.42■□□□□ 0.38
COL4A5-203ENST00000470339 RBM46Q8TBY0 533 aaKnown RBP17.42■□□□□ 0.38
COL4A5-203ENST00000470339 PIBF1Q8WXW3 757 aa17.42■□□□□ 0.38
COL4A5-203ENST00000470339 SHISA4Q96DD7 197 aa17.42■□□□□ 0.38
COL4A5-203ENST00000470339 C12orf42Q96LP6 360 aa17.42■□□□□ 0.38
COL4A5-203ENST00000470339 SNCAIPQ9Y6H5 919 aa17.42■□□□□ 0.38
COL4A5-203ENST00000470339 ZHX2Q9Y6X8 837 aa17.42■□□□□ 0.38
COL4A5-203ENST00000470339 PTPRFP10586 1907 aa17.42■□□□□ 0.38
COL4A5-203ENST00000470339 ESYT2A0FGR8 921 aa17.41■□□□□ 0.38
COL4A5-203ENST00000470339 SLC16A2P36021 539 aa17.41■□□□□ 0.38
COL4A5-203ENST00000470339 VGLL4Q14135 290 aa17.41■□□□□ 0.38
COL4A5-203ENST00000470339 FAM83BQ5T0W9 1011 aa17.41■□□□□ 0.38
COL4A5-203ENST00000470339 DLK2Q6UY11 383 aa17.41■□□□□ 0.38
COL4A5-203ENST00000470339 HEATR3Q7Z4Q2 680 aa17.41■□□□□ 0.38
COL4A5-203ENST00000470339 CCDC84Q86UT8 332 aaPredicted RBP17.41■□□□□ 0.38
COL4A5-203ENST00000470339 NOSTRINQ8IVI9 506 aa17.41■□□□□ 0.38
COL4A5-203ENST00000470339 SPICE1Q8N0Z3 855 aa17.41■□□□□ 0.38
COL4A5-203ENST00000470339 TMEM87AQ8NBN3 555 aa17.41■□□□□ 0.38
COL4A5-203ENST00000470339 ZNF784Q8NCA9 323 aaPredicted RBP17.41■□□□□ 0.38
COL4A5-203ENST00000470339 DAGLBQ8NCG7 672 aa17.41■□□□□ 0.38
COL4A5-203ENST00000470339 NUP88Q99567 741 aaPredicted RBP17.41■□□□□ 0.38
COL4A5-203ENST00000470339 SCAND2PQ9GZW5 306 aaPredicted RBP17.41■□□□□ 0.38
COL4A5-203ENST00000470339 ZMYND12Q9H0C1 365 aa17.41■□□□□ 0.38
COL4A5-203ENST00000470339 ISY1Q9ULR0 285 aaKnown RBP17.41■□□□□ 0.38
COL4A5-203ENST00000470339 AFG3L2Q9Y4W6 797 aa17.41■□□□□ 0.38
COL4A5-203ENST00000470339 PARP14Q460N5 1801 aa17.4■□□□□ 0.38
COL4A5-203ENST00000470339 BTBD18B2RXH4 712 aa17.4■□□□□ 0.38
COL4A5-203ENST00000470339 KIF28PB7ZC32 967 aa17.4■□□□□ 0.38
COL4A5-203ENST00000470339 GNA11P29992 359 aa17.4■□□□□ 0.38
COL4A5-203ENST00000470339 FKBP1BP68106 108 aa17.4■□□□□ 0.38
COL4A5-203ENST00000470339 PRKG1Q13976 671 aa17.4■□□□□ 0.38
COL4A5-203ENST00000470339 NPY5RQ15761 445 aa17.4■□□□□ 0.38
COL4A5-203ENST00000470339 MAP1SQ66K74 1059 aaPredicted RBP17.4■□□□□ 0.38
COL4A5-203ENST00000470339 HOMER1Q86YM7 354 aa17.4■□□□□ 0.38
COL4A5-203ENST00000470339 TEX2Q8IWB9 1127 aa17.4■□□□□ 0.38
COL4A5-203ENST00000470339 GPKOWQ92917 476 aaPredicted RBP eCLIP17.4■□□□□ 0.38
COL4A5-203ENST00000470339 EMILIN3Q9NT22 766 aa17.4■□□□□ 0.38
COL4A5-203ENST00000470339 PRR12Q9ULL5 1215 aa17.4■□□□□ 0.38
COL4A5-203ENST00000470339 PCDHA4Q9UN74 947 aa17.4■□□□□ 0.38
COL4A5-203ENST00000470339 FZD1Q9UP38 647 aa17.4■□□□□ 0.38
COL4A5-203ENST00000470339 POTEIP0CG38 1075 aa17.39■□□□□ 0.37
COL4A5-203ENST00000470339 POTEJP0CG39 1038 aa17.39■□□□□ 0.37
COL4A5-203ENST00000470339 NAPAP54920 295 aa17.39■□□□□ 0.37
COL4A5-203ENST00000470339 PPATQ06203 517 aa17.39■□□□□ 0.37
COL4A5-203ENST00000470339 IKQ13123 557 aaPredicted RBP17.39■□□□□ 0.37
COL4A5-203ENST00000470339 MTMR2Q13614 643 aa17.39■□□□□ 0.37
COL4A5-203ENST00000470339 ZYXQ15942 572 aaKnown RBP17.39■□□□□ 0.37
COL4A5-203ENST00000470339 FOXD4L6Q3SYB3 417 aaPredicted RBP17.39■□□□□ 0.37
COL4A5-203ENST00000470339 SH3D19Q5HYK7 790 aa17.39■□□□□ 0.37
COL4A5-203ENST00000470339 LDLRAD1Q5T700 205 aa17.39■□□□□ 0.37
COL4A5-203ENST00000470339 MYSM1Q5VVJ2 828 aa17.39■□□□□ 0.37
COL4A5-203ENST00000470339 FOXD4L3Q6VB84 417 aaPredicted RBP17.39■□□□□ 0.37
COL4A5-203ENST00000470339 ERO1BQ86YB8 467 aa17.39■□□□□ 0.37
COL4A5-203ENST00000470339 BLIDQ8IZY5 108 aa17.39■□□□□ 0.37
COL4A5-203ENST00000470339 BICD2Q8TD16 824 aa17.39■□□□□ 0.37
COL4A5-203ENST00000470339 GLT8D2Q9H1C3 349 aa17.39■□□□□ 0.37
COL4A5-203ENST00000470339 C6orf50Q9HD87 102 aa17.39■□□□□ 0.37
COL4A5-203ENST00000470339 ELP1O95163 1332 aa17.39■□□□□ 0.37
COL4A5-203ENST00000470339 TRPM7Q96QT4 1865 aa17.39■□□□□ 0.37
COL4A5-203ENST00000470339 FDX1P10109 184 aa17.38■□□□□ 0.37
COL4A5-203ENST00000470339 TTLL12Q14166 644 aaPredicted RBP17.38■□□□□ 0.37
COL4A5-203ENST00000470339 CDC37Q16543 378 aaPredicted RBP17.38■□□□□ 0.37
COL4A5-203ENST00000470339 QRICH1Q2TAL8 776 aa17.38■□□□□ 0.37
COL4A5-203ENST00000470339 TYW1BQ6NUM6 668 aa17.38■□□□□ 0.37
COL4A5-203ENST00000470339 FAM173BQ6P4H8 233 aa17.38■□□□□ 0.37
COL4A5-203ENST00000470339 PRPF38AQ8NAV1 312 aaKnown RBP17.38■□□□□ 0.37
COL4A5-203ENST00000470339 TNFRSF25Q93038 417 aa17.38■□□□□ 0.37
COL4A5-203ENST00000470339 AMNQ9BXJ7 453 aa17.38■□□□□ 0.37
COL4A5-203ENST00000470339 NMRK2Q9NPI5 230 aa17.38■□□□□ 0.37
COL4A5-203ENST00000470339 LMBRD1Q9NUN5 540 aa17.38■□□□□ 0.37
COL4A5-203ENST00000470339 CNPY2Q9Y2B0 182 aa17.38■□□□□ 0.37
COL4A5-203ENST00000470339 SMCO2A6NFE2 343 aa17.37■□□□□ 0.37
COL4A5-203ENST00000470339 SPDYE5A6NIY4 337 aa17.37■□□□□ 0.37
COL4A5-203ENST00000470339 M0R2N6 131 aa17.37■□□□□ 0.37
COL4A5-203ENST00000470339 CXCL11O14625 94 aa17.37■□□□□ 0.37
COL4A5-203ENST00000470339 VCAM1P19320 739 aa17.37■□□□□ 0.37
COL4A5-203ENST00000470339 NCLP19338 710 aaKnown RBP17.37■□□□□ 0.37
COL4A5-203ENST00000470339 SKOR2Q2VWA4 1001 aaPredicted RBP17.37■□□□□ 0.37
COL4A5-203ENST00000470339 RILPL1Q5EBL4 403 aa17.37■□□□□ 0.37
COL4A5-203ENST00000470339 OXER1Q8TDS5 423 aa17.37■□□□□ 0.37
COL4A5-203ENST00000470339 CHAMP1Q96JM3 812 aa17.37■□□□□ 0.37
COL4A5-203ENST00000470339 RANBP17Q9H2T7 1088 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms