RNA–Protein interactions for RNA: ENST00000468822.5

SRRM1-207, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 768 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-207ENST00000468822 RIPK3Q9Y572 518 aa18.62■□□□□ 0.57
SRRM1-207ENST00000468822 ZBED9Q6R2W3 1325 aa18.61■□□□□ 0.57
SRRM1-207ENST00000468822 KCNA10Q16322 511 aa18.61■□□□□ 0.57
SRRM1-207ENST00000468822 CTR9Q6PD62 1173 aa18.61■□□□□ 0.57
SRRM1-207ENST00000468822 TOX2Q96NM4 488 aa18.61■□□□□ 0.57
SRRM1-207ENST00000468822 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.61■□□□□ 0.574e-15■■■□□ 18
SRRM1-207ENST00000468822 BOLA2Q9H3K6 86 aa18.61■□□□□ 0.57
SRRM1-207ENST00000468822 KANSL2Q9H9L4 492 aa18.61■□□□□ 0.57
SRRM1-207ENST00000468822 STARD7Q9NQZ5 370 aa18.61■□□□□ 0.57
SRRM1-207ENST00000468822 PAG1Q9NWQ8 432 aa18.61■□□□□ 0.57
SRRM1-207ENST00000468822 GRXCR1A8MXD5 290 aa18.6■□□□□ 0.57
SRRM1-207ENST00000468822 RAD21O60216 631 aa18.6■□□□□ 0.57
SRRM1-207ENST00000468822 PBX2P40425 430 aa18.6■□□□□ 0.57
SRRM1-207ENST00000468822 CLASRPQ8N2M8 674 aaKnown RBP18.6■□□□□ 0.57
SRRM1-207ENST00000468822 KIF1BPQ96EK5 621 aa18.6■□□□□ 0.57
SRRM1-207ENST00000468822 TSEN34Q9BSV6 310 aaKnown RBP18.6■□□□□ 0.57
SRRM1-207ENST00000468822 ZNF576Q9H609 170 aa18.6■□□□□ 0.57
SRRM1-207ENST00000468822 CNPY2Q9Y2B0 182 aa18.6■□□□□ 0.57
SRRM1-207ENST00000468822 DNAJC25-GNG10A0A024R161 153 aa18.59■□□□□ 0.57
SRRM1-207ENST00000468822 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.59■□□□□ 0.57
SRRM1-207ENST00000468822 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.59■□□□□ 0.57
SRRM1-207ENST00000468822 TIMP1P01033 207 aa18.59■□□□□ 0.57
SRRM1-207ENST00000468822 IFIT2P09913 472 aaKnown RBP18.59■□□□□ 0.57
SRRM1-207ENST00000468822 HSP90AB4PQ58FF6 505 aa18.59■□□□□ 0.57
SRRM1-207ENST00000468822 TIFAQ96CG3 184 aa18.59■□□□□ 0.57
SRRM1-207ENST00000468822 FGD4Q96M96 766 aa18.59■□□□□ 0.57
SRRM1-207ENST00000468822 GOPCQ9HD26 462 aa18.59■□□□□ 0.57
SRRM1-207ENST00000468822 GREB1LQ9C091 1923 aaPredicted RBP18.59■□□□□ 0.57
SRRM1-207ENST00000468822 DCDC2CA8MYV0 355 aa18.58■□□□□ 0.56
SRRM1-207ENST00000468822 CDK7P50613 346 aa18.58■□□□□ 0.56
SRRM1-207ENST00000468822 SNRNP48Q6IEG0 339 aaKnown RBP18.58■□□□□ 0.56
SRRM1-207ENST00000468822 MAMDC4Q6UXC1 1216 aa18.58■□□□□ 0.56
SRRM1-207ENST00000468822 SLF1Q9BQI6 1058 aa18.58■□□□□ 0.56
SRRM1-207ENST00000468822 PUS7LQ9H0K6 701 aaKnown RBP18.58■□□□□ 0.56
SRRM1-207ENST00000468822 ZHX1Q9UKY1 873 aaPredicted RBP18.58■□□□□ 0.56
SRRM1-207ENST00000468822 SLC4A4Q9Y6R1 1079 aa18.58■□□□□ 0.56
SRRM1-207ENST00000468822 SYNGAP1Q96PV0 1343 aa18.57■□□□□ 0.56
SRRM1-207ENST00000468822 NCOR1O75376 2440 aa18.57■□□□□ 0.56
SRRM1-207ENST00000468822 MOXD2PA6NHM9 499 aa18.57■□□□□ 0.56
SRRM1-207ENST00000468822 ATP5JP18859 108 aa18.57■□□□□ 0.56
SRRM1-207ENST00000468822 TJAP1Q5JTD0 557 aa18.57■□□□□ 0.56
SRRM1-207ENST00000468822 TMEM240Q5SV17 173 aa18.57■□□□□ 0.56
SRRM1-207ENST00000468822 RASIP1Q5U651 963 aa18.57■□□□□ 0.56
SRRM1-207ENST00000468822 MFSD5Q6N075 450 aa18.57■□□□□ 0.56
SRRM1-207ENST00000468822 NUP133Q8WUM0 1156 aa18.57■□□□□ 0.56
SRRM1-207ENST00000468822 SYMPKQ92797 1274 aaKnown RBP18.57■□□□□ 0.56
SRRM1-207ENST00000468822 HAUS7Q99871 368 aa18.57■□□□□ 0.56
SRRM1-207ENST00000468822 TEX13BQ9BXU2 312 aa18.57■□□□□ 0.56
SRRM1-207ENST00000468822 PBX4Q9BYU1 374 aa18.57■□□□□ 0.56
SRRM1-207ENST00000468822 FAM184BQ9ULE4 1060 aa18.57■□□□□ 0.56
SRRM1-207ENST00000468822 DUSP11O75319 330 aaKnown RBP18.56■□□□□ 0.56
SRRM1-207ENST00000468822 NDUFB10O96000 172 aa18.56■□□□□ 0.56
SRRM1-207ENST00000468822 CSF2RAP15509 400 aa18.56■□□□□ 0.56
SRRM1-207ENST00000468822 RASA1P20936 1047 aa18.56■□□□□ 0.56
SRRM1-207ENST00000468822 COPB2P35606 906 aa18.56■□□□□ 0.56
SRRM1-207ENST00000468822 UBE3CQ15386 1083 aa18.56■□□□□ 0.56
SRRM1-207ENST00000468822 STK11IPQ8N1F8 1099 aa18.56■□□□□ 0.56
SRRM1-207ENST00000468822 MSL3Q8N5Y2 521 aaKnown RBP18.56■□□□□ 0.56
SRRM1-207ENST00000468822 MYO9BQ13459 2157 aa18.55■□□□□ 0.56
SRRM1-207ENST00000468822 TRANK1O15050 2925 aa18.55■□□□□ 0.56
SRRM1-207ENST00000468822 F5H6K3 240 aa18.55■□□□□ 0.56
SRRM1-207ENST00000468822 CTAGE5O15320 804 aa18.55■□□□□ 0.56
SRRM1-207ENST00000468822 ASGR1P07306 291 aa18.55■□□□□ 0.56
SRRM1-207ENST00000468822 ACRP10323 421 aa18.55■□□□□ 0.56
SRRM1-207ENST00000468822 CST5P28325 142 aaPredicted RBP18.55■□□□□ 0.56
SRRM1-207ENST00000468822 SLC4A3P48751 1232 aa18.55■□□□□ 0.56
SRRM1-207ENST00000468822 KLRC3Q07444 240 aa18.55■□□□□ 0.56
SRRM1-207ENST00000468822 ACVR2BQ13705 512 aa18.55■□□□□ 0.56
SRRM1-207ENST00000468822 DDX11Q96FC9 970 aa18.55■□□□□ 0.56
SRRM1-207ENST00000468822 PRDM12Q9H4Q4 367 aa18.55■□□□□ 0.56
SRRM1-207ENST00000468822 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.55■□□□□ 0.56
SRRM1-207ENST00000468822 MCM3APO60318 1980 aa18.55■□□□□ 0.56
SRRM1-207ENST00000468822 ELP1O95163 1332 aa18.54■□□□□ 0.56
SRRM1-207ENST00000468822 C6orf222P0C671 652 aaPredicted RBP18.54■□□□□ 0.56
SRRM1-207ENST00000468822 ADGRE1Q14246 886 aa18.54■□□□□ 0.56
SRRM1-207ENST00000468822 CCDC144BQ3MJ40 725 aa18.54■□□□□ 0.56
SRRM1-207ENST00000468822 AMOTL1Q8IY63 956 aa18.54■□□□□ 0.56
SRRM1-207ENST00000468822 CPXCR1Q8N123 301 aa18.54■□□□□ 0.56
SRRM1-207ENST00000468822 PPM1EQ8WY54 764 aa18.54■□□□□ 0.56
SRRM1-207ENST00000468822 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.54■□□□□ 0.569e-22■■□□□ 12.3
SRRM1-207ENST00000468822 KATNBL1Q9H079 304 aa18.54■□□□□ 0.56
SRRM1-207ENST00000468822 UPF3AQ9H1J1 476 aaKnown RBP18.54■□□□□ 0.56
SRRM1-207ENST00000468822 RAVER2Q9HCJ3 691 aaKnown RBP18.54■□□□□ 0.56
SRRM1-207ENST00000468822 RAPGEFL1Q9UHV5 662 aa18.54■□□□□ 0.56
SRRM1-207ENST00000468822 TNFRSF10AO00220 468 aa18.53■□□□□ 0.56
SRRM1-207ENST00000468822 ATP2A1O14983 1001 aa18.53■□□□□ 0.56
SRRM1-207ENST00000468822 PTGS1P23219 599 aa18.53■□□□□ 0.56
SRRM1-207ENST00000468822 HNRNPUQ00839 825 aaKnown RBP eCLIP18.53■□□□□ 0.56
SRRM1-207ENST00000468822 C1QBPQ07021 282 aaKnown RBP18.53■□□□□ 0.56
SRRM1-207ENST00000468822 ZNF365Q70YC5 407 aa18.53■□□□□ 0.56
SRRM1-207ENST00000468822 ZNF467Q7Z7K2 595 aaPredicted RBP18.53■□□□□ 0.56
SRRM1-207ENST00000468822 FAM126BQ8IXS8 530 aa18.53■□□□□ 0.56
SRRM1-207ENST00000468822 RPAP2Q8IXW5 612 aaPredicted RBP18.53■□□□□ 0.56
SRRM1-207ENST00000468822 GLT1D1Q96MS3 346 aa18.53■□□□□ 0.56
SRRM1-207ENST00000468822 STRBPQ96SI9 672 aaKnown RBP18.53■□□□□ 0.56
SRRM1-207ENST00000468822 PPP1R12CQ9BZL4 782 aa18.53■□□□□ 0.56
SRRM1-207ENST00000468822 ZBTB40Q9NUA8 1239 aa18.53■□□□□ 0.56
SRRM1-207ENST00000468822 CXXC1Q9P0U4 656 aaPredicted RBP18.53■□□□□ 0.56
SRRM1-207ENST00000468822 NYAP2Q9P242 653 aa18.53■□□□□ 0.56
SRRM1-207ENST00000468822 MYH7P12883 1935 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms