RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 GALK1P51570 392 aa6.32□□□□□ -1.4
GPNMB-207ENST00000468723 TIGD5Q53EQ6 642 aa6.32□□□□□ -1.4
GPNMB-207ENST00000468723 VPS37DQ86XT2 251 aa6.32□□□□□ -1.4
GPNMB-207ENST00000468723 OXR1Q8N573 874 aa6.32□□□□□ -1.4
GPNMB-207ENST00000468723 LINC00116Q8NCU8 138 aa6.32□□□□□ -1.4
GPNMB-207ENST00000468723 OR6P1Q8NGX9 317 aa6.32□□□□□ -1.4
GPNMB-207ENST00000468723 SMARCC1Q92922 1105 aaPredicted RBP6.32□□□□□ -1.4
GPNMB-207ENST00000468723 SP110Q9HB58 689 aa6.32□□□□□ -1.4
GPNMB-207ENST00000468723 GP6Q9HCN6 339 aa6.32□□□□□ -1.4
GPNMB-207ENST00000468723 ZNF451Q9Y4E5 1061 aa6.32□□□□□ -1.4
GPNMB-207ENST00000468723 CD247P20963 164 aa6.31□□□□□ -1.4
GPNMB-207ENST00000468723 ZNF445P59923 1031 aa6.31□□□□□ -1.4
GPNMB-207ENST00000468723 DUSP4Q13115 394 aa6.31□□□□□ -1.4
GPNMB-207ENST00000468723 ZNF648Q5T619 568 aaPredicted RBP6.31□□□□□ -1.4
GPNMB-207ENST00000468723 PRR23BQ6ZRT6 265 aa6.31□□□□□ -1.4
GPNMB-207ENST00000468723 SIRT2Q8IXJ6 389 aa6.31□□□□□ -1.4
GPNMB-207ENST00000468723 ADCY4Q8NFM4 1077 aa6.31□□□□□ -1.4
GPNMB-207ENST00000468723 LINC01599Q8WXQ3 324 aa6.31□□□□□ -1.4
GPNMB-207ENST00000468723 G6PC3Q9BUM1 346 aa6.31□□□□□ -1.4
GPNMB-207ENST00000468723 CDADC1Q9BWV3 514 aa6.31□□□□□ -1.4
GPNMB-207ENST00000468723 RNF32Q9H0A6 362 aa6.31□□□□□ -1.4
GPNMB-207ENST00000468723 KCNK12Q9HB15 430 aa6.31□□□□□ -1.4
GPNMB-207ENST00000468723 ZNF281Q9Y2X9 895 aa6.31□□□□□ -1.4
GPNMB-207ENST00000468723 SLC12A7Q9Y666 1083 aa6.31□□□□□ -1.4
GPNMB-207ENST00000468723 FITM1A5D6W6 292 aa6.3□□□□□ -1.4
GPNMB-207ENST00000468723 H0Y8X5 98 aa6.3□□□□□ -1.4
GPNMB-207ENST00000468723 USP2O75604 605 aaPredicted RBP6.3□□□□□ -1.4
GPNMB-207ENST00000468723 SSBP05455 408 aaKnown RBP eCLIP6.3□□□□□ -1.4
GPNMB-207ENST00000468723 VAV1P15498 845 aa6.3□□□□□ -1.4
GPNMB-207ENST00000468723 SLC7A5Q01650 507 aa6.3□□□□□ -1.4
GPNMB-207ENST00000468723 PPP2R5DQ14738 602 aa6.3□□□□□ -1.4
GPNMB-207ENST00000468723 ANKRD39Q53RE8 183 aa6.3□□□□□ -1.4
GPNMB-207ENST00000468723 SPPL2CQ8IUH8 684 aa6.3□□□□□ -1.4
GPNMB-207ENST00000468723 FGD4Q96M96 766 aa6.3□□□□□ -1.4
GPNMB-207ENST00000468723 DIRC2Q96SL1 478 aa6.3□□□□□ -1.4
GPNMB-207ENST00000468723 NOL6Q9H6R4 1146 aaKnown RBP6.3□□□□□ -1.4
GPNMB-207ENST00000468723 PHAXQ9H814 394 aaKnown RBP6.3□□□□□ -1.4
GPNMB-207ENST00000468723 AP5S1Q9NUS5 200 aa6.3□□□□□ -1.4
GPNMB-207ENST00000468723 GPR160Q9UJ42 338 aa6.3□□□□□ -1.4
GPNMB-207ENST00000468723 CBFA2T2O43439 604 aa6.29□□□□□ -1.4
GPNMB-207ENST00000468723 PSPNO60542 156 aa6.29□□□□□ -1.4
GPNMB-207ENST00000468723 GSNP06396 782 aa6.29□□□□□ -1.4
GPNMB-207ENST00000468723 ITGA4P13612 1032 aa6.29□□□□□ -1.4
GPNMB-207ENST00000468723 BMP8BP34820 402 aa6.29□□□□□ -1.4
GPNMB-207ENST00000468723 GNL2Q13823 731 aaKnown RBP6.29□□□□□ -1.4
GPNMB-207ENST00000468723 TCEAL1Q15170 157 aa6.29□□□□□ -1.4
GPNMB-207ENST00000468723 SLC14A2Q15849 920 aa6.29□□□□□ -1.4
GPNMB-207ENST00000468723 CWF19L1Q69YN2 538 aaKnown RBP6.29□□□□□ -1.4
GPNMB-207ENST00000468723 HEATR6Q6AI08 1181 aaKnown RBP6.29□□□□□ -1.4
GPNMB-207ENST00000468723 KIAA1211LQ6NV74 962 aa6.29□□□□□ -1.4
GPNMB-207ENST00000468723 ADAT2Q7Z6V5 191 aaKnown RBP6.29□□□□□ -1.4
GPNMB-207ENST00000468723 FIBCD1Q8N539 461 aa6.29□□□□□ -1.4
GPNMB-207ENST00000468723 ANKS4BQ8N8V4 417 aa6.29□□□□□ -1.4
GPNMB-207ENST00000468723 C19orf47Q8N9M1 422 aaKnown RBP6.29□□□□□ -1.4
GPNMB-207ENST00000468723 MAP6Q96JE9 813 aa6.29□□□□□ -1.4
GPNMB-207ENST00000468723 HHIPL1Q96JK4 782 aa6.29□□□□□ -1.4
GPNMB-207ENST00000468723 ZDHHC15Q96MV8 337 aa6.29□□□□□ -1.4
GPNMB-207ENST00000468723 HAUS7Q99871 368 aa6.29□□□□□ -1.4
GPNMB-207ENST00000468723 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.29□□□□□ -1.4
GPNMB-207ENST00000468723 NSUN3Q9H649 340 aaKnown RBP6.29□□□□□ -1.4
GPNMB-207ENST00000468723 FAM53CQ9NYF3 392 aa6.29□□□□□ -1.4
GPNMB-207ENST00000468723 STRIP2Q9ULQ0 834 aa6.29□□□□□ -1.4
GPNMB-207ENST00000468723 CCDC180Q9P1Z9 1646 aa6.28□□□□□ -1.4
GPNMB-207ENST00000468723 SMAD7O15105 426 aaKnown RBP6.28□□□□□ -1.4
GPNMB-207ENST00000468723 ZNF205O95201 554 aa6.28□□□□□ -1.4
GPNMB-207ENST00000468723 EFEMP2O95967 443 aa6.28□□□□□ -1.4
GPNMB-207ENST00000468723 GSTM1P09488 218 aa6.28□□□□□ -1.4
GPNMB-207ENST00000468723 DNAJA1P31689 397 aaKnown RBP6.28□□□□□ -1.4
GPNMB-207ENST00000468723 CASP7P55210 303 aa6.28□□□□□ -1.4
GPNMB-207ENST00000468723 CHRNEQ04844 493 aa6.28□□□□□ -1.4
GPNMB-207ENST00000468723 CEP128Q6ZU80 1094 aa6.28□□□□□ -1.4
GPNMB-207ENST00000468723 LILRA2Q8N149 483 aa6.28□□□□□ -1.4
GPNMB-207ENST00000468723 POU5F2Q8N7G0 328 aa6.28□□□□□ -1.4
GPNMB-207ENST00000468723 KLHL6Q8WZ60 621 aa6.28□□□□□ -1.4
GPNMB-207ENST00000468723 TINF2Q9BSI4 451 aa6.28□□□□□ -1.4
GPNMB-207ENST00000468723 PRR13Q9NZ81 148 aa6.28□□□□□ -1.4
GPNMB-207ENST00000468723 NOTOA8MTQ0 251 aa6.27□□□□□ -1.41
GPNMB-207ENST00000468723 FARP2O94887 1054 aaPredicted RBP6.27□□□□□ -1.41
GPNMB-207ENST00000468723 EPHX1P07099 455 aa6.27□□□□□ -1.41
GPNMB-207ENST00000468723 ETFBP38117 255 aa6.27□□□□□ -1.41
GPNMB-207ENST00000468723 ARID5AQ03989 594 aa6.27□□□□□ -1.41
GPNMB-207ENST00000468723 NR0B2Q15466 257 aa6.27□□□□□ -1.41
GPNMB-207ENST00000468723 ZNF124Q15973 351 aa6.27□□□□□ -1.41
GPNMB-207ENST00000468723 RTP2Q5QGT7 225 aa6.27□□□□□ -1.41
GPNMB-207ENST00000468723 VHLLQ6RSH7 139 aa6.27□□□□□ -1.41
GPNMB-207ENST00000468723 SLC12A9Q9BXP2 914 aa6.27□□□□□ -1.41
GPNMB-207ENST00000468723 KLHL25Q9H0H3 589 aa6.27□□□□□ -1.41
GPNMB-207ENST00000468723 FHOD1Q9Y613 1164 aa6.27□□□□□ -1.41
GPNMB-207ENST00000468723 IGSF3O75054 1194 aa6.26□□□□□ -1.41
GPNMB-207ENST00000468723 VAMP4O75379 141 aa6.26□□□□□ -1.41
GPNMB-207ENST00000468723 CD3EP07766 207 aa6.26□□□□□ -1.41
GPNMB-207ENST00000468723 RTP1P59025 263 aa6.26□□□□□ -1.41
GPNMB-207ENST00000468723 KIR3DS1Q14943 382 aa6.26□□□□□ -1.41
GPNMB-207ENST00000468723 LARP1BQ659C4 914 aaKnown RBP6.26□□□□□ -1.41
GPNMB-207ENST00000468723 FCRL2Q96LA5 508 aaPredicted RBP6.26□□□□□ -1.41
GPNMB-207ENST00000468723 GOLGA2P5Q9HBQ8 144 aa6.26□□□□□ -1.41
GPNMB-207ENST00000468723 IGSF5Q9NSI5 407 aa6.26□□□□□ -1.41
GPNMB-207ENST00000468723 ERVK13-1Q9NX77 482 aa6.26□□□□□ -1.41
GPNMB-207ENST00000468723 WHRNQ9P202 907 aa6.26□□□□□ -1.41
GPNMB-207ENST00000468723 GPR55Q9Y2T6 319 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms