RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 ESR2Q92731 530 aa4.17□□□□□ -1.74
TRIM59-202ENST00000468542 ZKSCAN4Q969J2 545 aaPredicted RBP4.17□□□□□ -1.74
TRIM59-202ENST00000468542 MKL1Q969V6 931 aa4.17□□□□□ -1.74
TRIM59-202ENST00000468542 OPTNQ96CV9 577 aa4.17□□□□□ -1.74
TRIM59-202ENST00000468542 WNK4Q96J92 1243 aa4.17□□□□□ -1.74
TRIM59-202ENST00000468542 CLMNQ96JQ2 1002 aa4.17□□□□□ -1.74
TRIM59-202ENST00000468542 KRTAP9-2Q9BYQ4 174 aa4.17□□□□□ -1.74
TRIM59-202ENST00000468542 KIAA1683Q9H0B3 1180 aa4.17□□□□□ -1.74
TRIM59-202ENST00000468542 TCP11L1Q9NUJ3 509 aa4.17□□□□□ -1.74
TRIM59-202ENST00000468542 SAP30BPQ9UHR5 308 aaKnown RBP4.17□□□□□ -1.74
TRIM59-202ENST00000468542 AFG3L2Q9Y4W6 797 aa4.17□□□□□ -1.74
TRIM59-202ENST00000468542 ZHX2Q9Y6X8 837 aa4.17□□□□□ -1.74
TRIM59-202ENST00000468542 PLXNB2O15031 1838 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 COL11A1P12107 1806 aaPredicted RBP4.16□□□□□ -1.74
TRIM59-202ENST00000468542 ZNF236Q9UL36 1845 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 IGKV6D-41A0A0C4DH26 115 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 KRTAP9-6A0A140TA67 174 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 FAM187AA6NFU0 413 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 USP17L10C9JJH3 530 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 CD2BP2O95400 341 aaKnown RBP4.16□□□□□ -1.74
TRIM59-202ENST00000468542 TTLL1O95922 423 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 GH2P01242 217 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 HMGB1P09429 215 aaKnown RBP4.16□□□□□ -1.74
TRIM59-202ENST00000468542 CYP2D6P10635 497 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 HOXA7P31268 230 aaPredicted RBP4.16□□□□□ -1.74
TRIM59-202ENST00000468542 GUCY1A2P33402 732 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 GJA5P36382 358 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 KIF23Q02241 960 aaPredicted RBP4.16□□□□□ -1.74
TRIM59-202ENST00000468542 ICA1Q05084 483 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 TRDNQ13061 729 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 PABPC4Q13310 644 aaKnown RBP eCLIP4.16□□□□□ -1.74
TRIM59-202ENST00000468542 MOGSQ13724 837 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 PRKG1Q13976 671 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 KRT32Q14532 448 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 RRP1BQ14684 758 aaKnown RBP4.16□□□□□ -1.74
TRIM59-202ENST00000468542 NECTIN1Q15223 517 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 MSS51Q4VC12 460 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 RCSD1Q6JBY9 416 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 CYP4F22Q6NT55 531 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 BRICD5Q6PL45 260 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 LBX2Q6XYB7 198 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 CCDC129Q6ZRS4 1044 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 MFSD6Q6ZSS7 791 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 IQCA1Q86XH1 822 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 DGKHQ86XP1 1220 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 ZNF444Q8N0Y2 327 aaPredicted RBP4.16□□□□□ -1.74
TRIM59-202ENST00000468542 FBXL16Q8N461 479 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 GMCL1P1Q8NEA9 526 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 ANKS1AQ92625 1134 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 KCNB2Q92953 911 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 IL17RAQ96F46 866 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 TTC14Q96N46 770 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 PHOX2BQ99453 314 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 PARK7Q99497 189 aaKnown RBP4.16□□□□□ -1.74
TRIM59-202ENST00000468542 BEGAINQ9BUH8 593 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.16□□□□□ -1.74
TRIM59-202ENST00000468542 KRT23Q9C075 422 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 LSG1Q9H089 658 aaKnown RBP4.16□□□□□ -1.74
TRIM59-202ENST00000468542 IL25Q9H293 177 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 ELP3Q9H9T3 547 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 MKNK2Q9HBH9 465 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 ARHGEF10LQ9HCE6 1279 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 ANO2Q9NQ90 1003 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 MTMR4Q9NYA4 1195 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 NYAP2Q9P242 653 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 AGTPBP1Q9UPW5 1226 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 TMX2Q9Y320 296 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 ZNFX1Q9P2E3 1918 aaKnown RBP4.16□□□□□ -1.74
TRIM59-202ENST00000468542 MYPNQ86TC9 1320 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 WDR19Q8NEZ3 1342 aa4.16□□□□□ -1.74
TRIM59-202ENST00000468542 CYP2D7A0A087X1C5 515 aa4.15□□□□□ -1.75
TRIM59-202ENST00000468542 CCL15-CCL14A0A0B4J2E2 113 aa4.15□□□□□ -1.75
TRIM59-202ENST00000468542 TRIM75PA6NK02 468 aa4.15□□□□□ -1.75
TRIM59-202ENST00000468542 TSPY2A6NKD2 308 aa4.15□□□□□ -1.75
TRIM59-202ENST00000468542 FAM196BA6NMK8 535 aa4.15□□□□□ -1.75
TRIM59-202ENST00000468542 MINDY4BA8MYZ0 360 aa4.15□□□□□ -1.75
TRIM59-202ENST00000468542 TLR2O60603 784 aa4.15□□□□□ -1.75
TRIM59-202ENST00000468542 FMNL1O95466 1100 aaPredicted RBP4.15□□□□□ -1.75
TRIM59-202ENST00000468542 GNRH1P01148 92 aa4.15□□□□□ -1.75
TRIM59-202ENST00000468542 CYP21A2P08686 494 aa4.15□□□□□ -1.75
TRIM59-202ENST00000468542 TSPY3P0CV98 308 aa4.15□□□□□ -1.75
TRIM59-202ENST00000468542 TSPY8P0CW00 308 aa4.15□□□□□ -1.75
TRIM59-202ENST00000468542 AKR1B1P15121 316 aa4.15□□□□□ -1.75
TRIM59-202ENST00000468542 ZKSCAN1P17029 563 aaPredicted RBP4.15□□□□□ -1.75
TRIM59-202ENST00000468542 HSPA4P34932 840 aa4.15□□□□□ -1.75
TRIM59-202ENST00000468542 GCGRP47871 477 aa4.15□□□□□ -1.75
TRIM59-202ENST00000468542 GCLCP48506 637 aaPredicted RBP4.15□□□□□ -1.75
TRIM59-202ENST00000468542 RCAN1P53805 252 aa4.15□□□□□ -1.75
TRIM59-202ENST00000468542 ANAPC15P60006 121 aa4.15□□□□□ -1.75
TRIM59-202ENST00000468542 JAG1P78504 1218 aa4.15□□□□□ -1.75
TRIM59-202ENST00000468542 HTRA3P83110 453 aa4.15□□□□□ -1.75
TRIM59-202ENST00000468542 SPP2Q13103 211 aa4.15□□□□□ -1.75
TRIM59-202ENST00000468542 MTMR2Q13614 643 aa4.15□□□□□ -1.75
TRIM59-202ENST00000468542 SEPT2Q15019 361 aa4.15□□□□□ -1.75
TRIM59-202ENST00000468542 SART3Q15020 963 aaKnown RBP4.15□□□□□ -1.75
TRIM59-202ENST00000468542 RAB3GAP1Q15042 981 aa4.15□□□□□ -1.75
TRIM59-202ENST00000468542 CCL15Q16663 113 aa4.15□□□□□ -1.75
TRIM59-202ENST00000468542 USP17L2Q6R6M4 530 aa4.15□□□□□ -1.75
TRIM59-202ENST00000468542 SIAH1Q8IUQ4 282 aa4.15□□□□□ -1.75
TRIM59-202ENST00000468542 TBC1D10CQ8IV04 446 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms