RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 DDX11Q96FC9 970 aa13.75□□□□□ -0.21
RNF13-208ENST00000467996 SLC26A6Q9BXS9 759 aa13.75□□□□□ -0.21
RNF13-208ENST00000467996 RNF26Q9BY78 433 aaPredicted RBP13.75□□□□□ -0.21
RNF13-208ENST00000467996 RPAP3Q9H6T3 665 aaPredicted RBP13.75□□□□□ -0.21
RNF13-208ENST00000467996 ABT1Q9ULW3 272 aaKnown RBP13.75□□□□□ -0.21
RNF13-208ENST00000467996 RBBP6Q7Z6E9 1792 aaKnown RBP13.75□□□□□ -0.21
RNF13-208ENST00000467996 FDPSP14324 419 aaKnown RBP13.74□□□□□ -0.21
RNF13-208ENST00000467996 SMARCA1P28370 1054 aa13.74□□□□□ -0.21
RNF13-208ENST00000467996 ZNF157P51786 506 aaPredicted RBP13.74□□□□□ -0.21
RNF13-208ENST00000467996 MKRN3Q13064 507 aaKnown RBP13.74□□□□□ -0.21
RNF13-208ENST00000467996 IKQ13123 557 aaPredicted RBP13.74□□□□□ -0.21
RNF13-208ENST00000467996 SNAPC2Q13487 334 aa13.74□□□□□ -0.21
RNF13-208ENST00000467996 BTNL9Q6UXG8 535 aa13.74□□□□□ -0.21
RNF13-208ENST00000467996 GADL1Q6ZQY3 521 aa13.74□□□□□ -0.21
RNF13-208ENST00000467996 TRIM22Q8IYM9 498 aa13.74□□□□□ -0.21
RNF13-208ENST00000467996 PROCA1Q8NCQ7 364 aaPredicted RBP13.74□□□□□ -0.21
RNF13-208ENST00000467996 TANGO6Q9C0B7 1094 aa13.74□□□□□ -0.21
RNF13-208ENST00000467996 RIOX1Q9H6W3 641 aa13.74□□□□□ -0.21
RNF13-208ENST00000467996 ORC3Q9UBD5 711 aaPredicted RBP13.74□□□□□ -0.21
RNF13-208ENST00000467996 FEM1BQ9UK73 627 aa13.74□□□□□ -0.21
RNF13-208ENST00000467996 hCG_1642624A0A1W2PR95 340 aa13.73□□□□□ -0.21
RNF13-208ENST00000467996 PRPF3O43395 683 aaKnown RBP13.73□□□□□ -0.21
RNF13-208ENST00000467996 PLA2G6O60733 806 aa13.73□□□□□ -0.21
RNF13-208ENST00000467996 SLC10A3P09131 477 aa13.73□□□□□ -0.21
RNF13-208ENST00000467996 MOGSQ13724 837 aa13.73□□□□□ -0.21
RNF13-208ENST00000467996 TREML2Q5T2D2 321 aa13.73□□□□□ -0.21
RNF13-208ENST00000467996 SYDE2Q5VT97 1194 aa13.73□□□□□ -0.21
RNF13-208ENST00000467996 FAM160B2Q86V87 743 aa13.73□□□□□ -0.21
RNF13-208ENST00000467996 ADGRF4Q8IZF3 695 aa13.73□□□□□ -0.21
RNF13-208ENST00000467996 PIBF1Q8WXW3 757 aa13.73□□□□□ -0.21
RNF13-208ENST00000467996 FBXO28Q9NVF7 368 aa13.73□□□□□ -0.21
RNF13-208ENST00000467996 MYH15Q9Y2K3 1946 aa13.72□□□□□ -0.21
RNF13-208ENST00000467996 DEXIO95424 95 aa13.72□□□□□ -0.21
RNF13-208ENST00000467996 APLP1P51693 650 aa13.72□□□□□ -0.21
RNF13-208ENST00000467996 GTF2A2P52657 109 aa13.72□□□□□ -0.21
RNF13-208ENST00000467996 AKAP17AQ02040 695 aaKnown RBP13.72□□□□□ -0.21
RNF13-208ENST00000467996 PKN1Q16512 942 aa13.72□□□□□ -0.21
RNF13-208ENST00000467996 HOMER1Q86YM7 354 aa13.72□□□□□ -0.21
RNF13-208ENST00000467996 FAM184AQ8NB25 1140 aa13.72□□□□□ -0.21
RNF13-208ENST00000467996 CHURC1Q8WUH1 139 aa13.72□□□□□ -0.21
RNF13-208ENST00000467996 KIFC2Q96AC6 838 aa13.72□□□□□ -0.21
RNF13-208ENST00000467996 MTMR8Q96EF0 704 aa13.72□□□□□ -0.21
RNF13-208ENST00000467996 RRP36Q96EU6 259 aaKnown RBP13.72□□□□□ -0.21
RNF13-208ENST00000467996 HHIPL1Q96JK4 782 aa13.72□□□□□ -0.21
RNF13-208ENST00000467996 MS4A4AQ96JQ5 239 aa13.72□□□□□ -0.21
RNF13-208ENST00000467996 AIFM3Q96NN9 605 aa13.72□□□□□ -0.21
RNF13-208ENST00000467996 PIGSQ96S52 555 aa13.72□□□□□ -0.21
RNF13-208ENST00000467996 SLF1Q9BQI6 1058 aa13.72□□□□□ -0.21
RNF13-208ENST00000467996 JMJD4Q9H9V9 463 aa13.72□□□□□ -0.21
RNF13-208ENST00000467996 CWC22Q9HCG8 908 aaKnown RBP13.72□□□□□ -0.21
RNF13-208ENST00000467996 VAT1LQ9HCJ6 419 aa13.72□□□□□ -0.21
RNF13-208ENST00000467996 RBM27Q9P2N5 1060 aaKnown RBP13.72□□□□□ -0.21
RNF13-208ENST00000467996 PRR12Q9ULL5 1215 aa13.72□□□□□ -0.21
RNF13-208ENST00000467996 AGTPBP1Q9UPW5 1226 aa13.72□□□□□ -0.21
RNF13-208ENST00000467996 V9GY48 417 aaPredicted RBP13.72□□□□□ -0.21
RNF13-208ENST00000467996 USP17L15C9J2P7 530 aa13.71□□□□□ -0.21
RNF13-208ENST00000467996 USP17L13C9JLJ4 530 aa13.71□□□□□ -0.21
RNF13-208ENST00000467996 USP17L11C9JVI0 530 aa13.71□□□□□ -0.21
RNF13-208ENST00000467996 USP17L18D6R9N7 530 aa13.71□□□□□ -0.21
RNF13-208ENST00000467996 USP17L22D6RA61 530 aa13.71□□□□□ -0.21
RNF13-208ENST00000467996 USP17L17D6RBQ6 530 aa13.71□□□□□ -0.21
RNF13-208ENST00000467996 USP17L19D6RCP7 530 aa13.71□□□□□ -0.21
RNF13-208ENST00000467996 USP17L20D6RJB6 530 aa13.71□□□□□ -0.21
RNF13-208ENST00000467996 FLOT1O75955 427 aa13.71□□□□□ -0.21
RNF13-208ENST00000467996 CETPP11597 493 aa13.71□□□□□ -0.21
RNF13-208ENST00000467996 DDIT3P35638 169 aa13.71□□□□□ -0.21
RNF13-208ENST00000467996 USP17L24Q0WX57 530 aa13.71□□□□□ -0.21
RNF13-208ENST00000467996 CDC37Q16543 378 aaPredicted RBP13.71□□□□□ -0.21
RNF13-208ENST00000467996 PFKFB3Q16875 520 aaPredicted RBP13.71□□□□□ -0.21
RNF13-208ENST00000467996 CATSPERGQ6ZRH7 1159 aa13.71□□□□□ -0.21
RNF13-208ENST00000467996 FASTKD5Q7L8L6 764 aaKnown RBP13.71□□□□□ -0.21
RNF13-208ENST00000467996 WASF1Q92558 559 aa13.71□□□□□ -0.21
RNF13-208ENST00000467996 ALG1Q9BT22 464 aa13.71□□□□□ -0.21
RNF13-208ENST00000467996 CREBZFQ9NS37 354 aa13.71□□□□□ -0.21
RNF13-208ENST00000467996 SEC63Q9UGP8 760 aaKnown RBP13.71□□□□□ -0.21
RNF13-208ENST00000467996 PPP1R9AQ9ULJ8 1098 aa13.71□□□□□ -0.21
RNF13-208ENST00000467996 CCL15-CCL14A0A0B4J2E2 113 aa13.7□□□□□ -0.22
RNF13-208ENST00000467996 FAM155AB1AL88 458 aaPredicted RBP13.7□□□□□ -0.22
RNF13-208ENST00000467996 SCG2P13521 617 aa13.7□□□□□ -0.22
RNF13-208ENST00000467996 HOXA7P31268 230 aaPredicted RBP13.7□□□□□ -0.22
RNF13-208ENST00000467996 FOSBP53539 338 aa13.7□□□□□ -0.22
RNF13-208ENST00000467996 SNAP25P60880 206 aa13.7□□□□□ -0.22
RNF13-208ENST00000467996 CCL15Q16663 113 aa13.7□□□□□ -0.22
RNF13-208ENST00000467996 QRICH1Q2TAL8 776 aa13.7□□□□□ -0.22
RNF13-208ENST00000467996 GPAT2Q6NUI2 795 aa13.7□□□□□ -0.22
RNF13-208ENST00000467996 PRPF38AQ8NAV1 312 aaKnown RBP13.7□□□□□ -0.22
RNF13-208ENST00000467996 BRI3BPQ8WY22 251 aa13.7□□□□□ -0.22
RNF13-208ENST00000467996 RANBP17Q9H2T7 1088 aaKnown RBP13.7□□□□□ -0.22
RNF13-208ENST00000467996 KIF3AQ9Y496 699 aa13.7□□□□□ -0.22
RNF13-208ENST00000467996 THSD7BQ9C0I4 1608 aa13.7□□□□□ -0.22
RNF13-208ENST00000467996 SMCHD1A6NHR9 2005 aa13.69□□□□□ -0.22
RNF13-208ENST00000467996 MYPNQ86TC9 1320 aa13.69□□□□□ -0.22
RNF13-208ENST00000467996 PNMA6FA0A0J9YX94 578 aa13.69□□□□□ -0.22
RNF13-208ENST00000467996 ZBTB5O15062 677 aa13.69□□□□□ -0.22
RNF13-208ENST00000467996 PPP1R11O60927 126 aaPredicted RBP13.69□□□□□ -0.22
RNF13-208ENST00000467996 WWC2Q6AWC2 1192 aa13.69□□□□□ -0.22
RNF13-208ENST00000467996 GPKOWQ92917 476 aaPredicted RBP eCLIP13.69□□□□□ -0.22
RNF13-208ENST00000467996 CCDC102AQ96A19 550 aa13.69□□□□□ -0.22
RNF13-208ENST00000467996 ATG4CQ96DT6 458 aa13.69□□□□□ -0.22
RNF13-208ENST00000467996 TESPA1A2RU30 521 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms