RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 BRCA2P51587 3418 aa12.94□□□□□ -0.34
MSH5-212ENST00000467319 FRMPD2Q68DX3 1309 aaPredicted RBP12.94□□□□□ -0.34
MSH5-212ENST00000467319 FMNL1O95466 1100 aaPredicted RBP12.94□□□□□ -0.34
MSH5-212ENST00000467319 FDX1P10109 184 aa12.94□□□□□ -0.34
MSH5-212ENST00000467319 LIFRP42702 1097 aa12.94□□□□□ -0.34
MSH5-212ENST00000467319 OAZ1P54368 228 aa12.94□□□□□ -0.34
MSH5-212ENST00000467319 CCNA1P78396 465 aa12.94□□□□□ -0.34
MSH5-212ENST00000467319 PRKCZQ05513 592 aa12.94□□□□□ -0.34
MSH5-212ENST00000467319 TROAPQ12815 778 aa12.94□□□□□ -0.34
MSH5-212ENST00000467319 WTAPQ15007 396 aa12.94□□□□□ -0.34
MSH5-212ENST00000467319 TTBK2Q6IQ55 1244 aa12.94□□□□□ -0.34
MSH5-212ENST00000467319 GPR142Q7Z601 462 aa12.94□□□□□ -0.34
MSH5-212ENST00000467319 SGMS1Q86VZ5 419 aa12.94□□□□□ -0.34
MSH5-212ENST00000467319 RIOX2Q8IUF8 465 aa12.94□□□□□ -0.34
MSH5-212ENST00000467319 CHURC1Q8WUH1 139 aa12.94□□□□□ -0.34
MSH5-212ENST00000467319 USP6NLQ92738 828 aa12.94□□□□□ -0.34
MSH5-212ENST00000467319 KIFC2Q96AC6 838 aa12.94□□□□□ -0.34
MSH5-212ENST00000467319 TEX13BQ9BXU2 312 aa12.94□□□□□ -0.34
MSH5-212ENST00000467319 PRR12Q9ULL5 1215 aa12.94□□□□□ -0.34
MSH5-212ENST00000467319 DOCK3Q8IZD9 2030 aa12.94□□□□□ -0.34
MSH5-212ENST00000467319 ZNF536O15090 1300 aa12.93□□□□□ -0.34
MSH5-212ENST00000467319 ERICH2A1L162 156 aa12.93□□□□□ -0.34
MSH5-212ENST00000467319 DDAH1O94760 285 aa12.93□□□□□ -0.34
MSH5-212ENST00000467319 HMGB1P09429 215 aaKnown RBP12.93□□□□□ -0.34
MSH5-212ENST00000467319 IRF5Q13568 498 aa12.93□□□□□ -0.34
MSH5-212ENST00000467319 GRB14Q14449 540 aa12.93□□□□□ -0.34
MSH5-212ENST00000467319 GRM4Q14833 912 aa12.93□□□□□ -0.34
MSH5-212ENST00000467319 MORN1Q5T089 497 aa12.93□□□□□ -0.34
MSH5-212ENST00000467319 SYDE2Q5VT97 1194 aa12.93□□□□□ -0.34
MSH5-212ENST00000467319 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.93□□□□□ -0.34
MSH5-212ENST00000467319 DHX32Q7L7V1 743 aaKnown RBP12.93□□□□□ -0.34
MSH5-212ENST00000467319 SOCS4Q8WXH5 440 aa12.93□□□□□ -0.34
MSH5-212ENST00000467319 JAKMIP1Q96N16 626 aaKnown RBP12.93□□□□□ -0.34
MSH5-212ENST00000467319 RANBP17Q9H2T7 1088 aaKnown RBP12.93□□□□□ -0.34
MSH5-212ENST00000467319 GJD2Q9UKL4 321 aa12.93□□□□□ -0.34
MSH5-212ENST00000467319 MTMR7Q9Y216 660 aa12.93□□□□□ -0.34
MSH5-212ENST00000467319 PTCH2Q9Y6C5 1203 aa12.93□□□□□ -0.34
MSH5-212ENST00000467319 RBBP6Q7Z6E9 1792 aaKnown RBP12.92□□□□□ -0.34
MSH5-212ENST00000467319 EIF5BO60841 1220 aaKnown RBP12.92□□□□□ -0.34
MSH5-212ENST00000467319 SEC24BO95487 1268 aa12.92□□□□□ -0.34
MSH5-212ENST00000467319 ERCC3P19447 782 aa12.92□□□□□ -0.34
MSH5-212ENST00000467319 COPB2P35606 906 aa12.92□□□□□ -0.34
MSH5-212ENST00000467319 SLC16A2P36021 539 aa12.92□□□□□ -0.34
MSH5-212ENST00000467319 FLT3LGP49771 235 aa12.92□□□□□ -0.34
MSH5-212ENST00000467319 SLC35G1Q2M3R5 365 aa12.92□□□□□ -0.34
MSH5-212ENST00000467319 SAMD1Q6SPF0 538 aaPredicted RBP12.92□□□□□ -0.34
MSH5-212ENST00000467319 PLEKHH3Q7Z736 793 aa12.92□□□□□ -0.34
MSH5-212ENST00000467319 ZNF654Q8IZM8 581 aa12.92□□□□□ -0.34
MSH5-212ENST00000467319 TNS4Q8IZW8 715 aa12.92□□□□□ -0.34
MSH5-212ENST00000467319 FBXL16Q8N461 479 aa12.92□□□□□ -0.34
MSH5-212ENST00000467319 COA7Q96BR5 231 aa12.92□□□□□ -0.34
MSH5-212ENST00000467319 CHMP4CQ96CF2 233 aa12.92□□□□□ -0.34
MSH5-212ENST00000467319 MAP3K14Q99558 947 aa12.92□□□□□ -0.34
MSH5-212ENST00000467319 LRRC2Q9BYS8 371 aa12.92□□□□□ -0.34
MSH5-212ENST00000467319 AGXT2Q9BYV1 514 aa12.92□□□□□ -0.34
MSH5-212ENST00000467319 TM6SF1Q9BZW5 370 aa12.92□□□□□ -0.34
MSH5-212ENST00000467319 MROH8Q9H579 483 aa12.92□□□□□ -0.34
MSH5-212ENST00000467319 GPCPD1Q9NPB8 672 aa12.92□□□□□ -0.34
MSH5-212ENST00000467319 MAD2L2Q9UI95 211 aa12.92□□□□□ -0.34
MSH5-212ENST00000467319 ISY1Q9ULR0 285 aaKnown RBP12.92□□□□□ -0.34
MSH5-212ENST00000467319 GABRQQ9UN88 632 aa12.92□□□□□ -0.34
MSH5-212ENST00000467319 NID2Q14112 1375 aa12.92□□□□□ -0.34
MSH5-212ENST00000467319 PALM3A6NDB9 673 aaPredicted RBP12.91□□□□□ -0.34
MSH5-212ENST00000467319 ZBED4O75132 1171 aa12.91□□□□□ -0.34
MSH5-212ENST00000467319 ECM2O94769 699 aaPredicted RBP12.91□□□□□ -0.34
MSH5-212ENST00000467319 SLC25A27O95847 323 aa12.91□□□□□ -0.34
MSH5-212ENST00000467319 PARP1P09874 1014 aaKnown RBP12.91□□□□□ -0.34
MSH5-212ENST00000467319 GOLGA8HP0CJ92 632 aa12.91□□□□□ -0.34
MSH5-212ENST00000467319 RPS6KB1P23443 525 aa12.91□□□□□ -0.34
MSH5-212ENST00000467319 HOXD10P28358 340 aa12.91□□□□□ -0.34
MSH5-212ENST00000467319 STAT3P40763 770 aa12.91□□□□□ -0.34
MSH5-212ENST00000467319 ANAPC15P60006 121 aa12.91□□□□□ -0.34
MSH5-212ENST00000467319 IKQ13123 557 aaPredicted RBP12.91□□□□□ -0.34
MSH5-212ENST00000467319 SNRNP48Q6IEG0 339 aaKnown RBP12.91□□□□□ -0.34
MSH5-212ENST00000467319 APOA5Q6Q788 366 aa12.91□□□□□ -0.34
MSH5-212ENST00000467319 ABRAQ8N0Z2 381 aa12.91□□□□□ -0.34
MSH5-212ENST00000467319 STAG2Q8N3U4 1231 aa12.91□□□□□ -0.34
MSH5-212ENST00000467319 ARMC5Q96C12 935 aa12.91□□□□□ -0.34
MSH5-212ENST00000467319 TCEANC2Q96MN5 208 aa12.91□□□□□ -0.34
MSH5-212ENST00000467319 HPS5Q9UPZ3 1129 aa12.91□□□□□ -0.34
MSH5-212ENST00000467319 RIPK3Q9Y572 518 aa12.91□□□□□ -0.34
MSH5-212ENST00000467319 SLC15A5A6NIM6 579 aa12.9□□□□□ -0.34
MSH5-212ENST00000467319 IGHA2P01877 340 aa12.9□□□□□ -0.34
MSH5-212ENST00000467319 ICAM1P05362 532 aa12.9□□□□□ -0.34
MSH5-212ENST00000467319 HOXC6P09630 235 aa12.9□□□□□ -0.34
MSH5-212ENST00000467319 CPA1P15085 419 aa12.9□□□□□ -0.34
MSH5-212ENST00000467319 PTPREP23469 700 aa12.9□□□□□ -0.34
MSH5-212ENST00000467319 PLS1Q14651 629 aa12.9□□□□□ -0.34
MSH5-212ENST00000467319 BLOC1S2Q6QNY1 142 aa12.9□□□□□ -0.34
MSH5-212ENST00000467319 CATIPQ7Z7H3 387 aa12.9□□□□□ -0.34
MSH5-212ENST00000467319 TMTC2Q8N394 836 aa12.9□□□□□ -0.34
MSH5-212ENST00000467319 MTMR8Q96EF0 704 aa12.9□□□□□ -0.34
MSH5-212ENST00000467319 ABHD8Q96I13 439 aa12.9□□□□□ -0.34
MSH5-212ENST00000467319 APBA2Q99767 749 aa12.9□□□□□ -0.34
MSH5-212ENST00000467319 CPVLQ9H3G5 476 aa12.9□□□□□ -0.34
MSH5-212ENST00000467319 RAVER2Q9HCJ3 691 aaKnown RBP12.9□□□□□ -0.34
MSH5-212ENST00000467319 ZSWIM6Q9HCJ5 1215 aa12.9□□□□□ -0.34
MSH5-212ENST00000467319 LCTP09848 1927 aa12.9□□□□□ -0.35
MSH5-212ENST00000467319 LRRC37A2A6NM11 1700 aa12.89□□□□□ -0.35
MSH5-212ENST00000467319 KLRF2D3W0D1 207 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 221.6 ms