RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 GUCA1BQ9UMX6 200 aa17.46■□□□□ 0.39
CHD1L-205ENST00000467213 EBAG9O00559 213 aa17.45■□□□□ 0.38
CHD1L-205ENST00000467213 PARP1P09874 1014 aaKnown RBP17.45■□□□□ 0.38
CHD1L-205ENST00000467213 PPP1R2P41236 205 aa17.45■□□□□ 0.38
CHD1L-205ENST00000467213 CCDC122Q5T0U0 273 aa17.45■□□□□ 0.38
CHD1L-205ENST00000467213 MCTP2Q6DN12 878 aa17.45■□□□□ 0.38
CHD1L-205ENST00000467213 KIF6Q6ZMV9 814 aa17.45■□□□□ 0.38
CHD1L-205ENST00000467213 IRF2BP1Q8IU81 584 aa17.45■□□□□ 0.38
CHD1L-205ENST00000467213 VPS16Q9H269 839 aa17.45■□□□□ 0.38
CHD1L-205ENST00000467213 GOLGA6CA6NDK9 693 aa17.45■□□□□ 0.38
CHD1L-205ENST00000467213 GOLGA6BA6NDN3 693 aa17.45■□□□□ 0.38
CHD1L-205ENST00000467213 PHACTR2O75167 634 aa17.45■□□□□ 0.38
CHD1L-205ENST00000467213 MBD4O95243 580 aa17.45■□□□□ 0.38
CHD1L-205ENST00000467213 GOLGA6DP0CG33 693 aa17.45■□□□□ 0.38
CHD1L-205ENST00000467213 SRGNP10124 158 aa17.45■□□□□ 0.38
CHD1L-205ENST00000467213 GIGYF2Q6Y7W6 1299 aaKnown RBP17.45■□□□□ 0.38
CHD1L-205ENST00000467213 SPATA5Q8NB90 893 aa17.45■□□□□ 0.38
CHD1L-205ENST00000467213 SHISA4Q96DD7 197 aa17.45■□□□□ 0.38
CHD1L-205ENST00000467213 GOLGA6AQ9NYA3 693 aa17.45■□□□□ 0.38
CHD1L-205ENST00000467213 TAB2Q9NYJ8 693 aa17.45■□□□□ 0.38
CHD1L-205ENST00000467213 NHSL1Q5SYE7 1610 aa17.45■□□□□ 0.38
CHD1L-205ENST00000467213 EIF3HO15372 352 aaKnown RBP eCLIP17.45■□□□□ 0.381e-6■■■■□ 23.8
CHD1L-205ENST00000467213 RPN1P04843 607 aaKnown RBP17.45■□□□□ 0.38
CHD1L-205ENST00000467213 CSB-PGBD3P0DP91 1061 aa17.45■□□□□ 0.38
CHD1L-205ENST00000467213 APBA1Q02410 837 aa17.45■□□□□ 0.38
CHD1L-205ENST00000467213 EMBQ6PCB8 327 aa17.45■□□□□ 0.38
CHD1L-205ENST00000467213 CCDC155Q8N6L0 562 aa17.45■□□□□ 0.38
CHD1L-205ENST00000467213 CAVIN3Q969G5 261 aa17.45■□□□□ 0.38
CHD1L-205ENST00000467213 DUOX1Q9NRD9 1551 aa17.44■□□□□ 0.38
CHD1L-205ENST00000467213 TFRCP02786 760 aaKnown RBP17.44■□□□□ 0.38
CHD1L-205ENST00000467213 HNRNPH3P31942 346 aaKnown RBP17.44■□□□□ 0.38
CHD1L-205ENST00000467213 PHKA1P46020 1223 aa17.44■□□□□ 0.38
CHD1L-205ENST00000467213 NPY5RQ15761 445 aa17.44■□□□□ 0.38
CHD1L-205ENST00000467213 TACO1Q9BSH4 297 aaKnown RBP17.44■□□□□ 0.38
CHD1L-205ENST00000467213 EXOC5O00471 708 aa17.44■□□□□ 0.38
CHD1L-205ENST00000467213 DDAH1O94760 285 aa17.44■□□□□ 0.38
CHD1L-205ENST00000467213 FGRP09769 529 aa17.44■□□□□ 0.38
CHD1L-205ENST00000467213 ZBED6P86452 979 aa17.44■□□□□ 0.38
CHD1L-205ENST00000467213 ESR2Q92731 530 aa17.44■□□□□ 0.38
CHD1L-205ENST00000467213 UBAC1Q9BSL1 405 aa17.44■□□□□ 0.38
CHD1L-205ENST00000467213 CNNM1Q9NRU3 951 aa17.44■□□□□ 0.38
CHD1L-205ENST00000467213 GLE1Q53GS7 698 aaKnown RBP17.43■□□□□ 0.38
CHD1L-205ENST00000467213 SMYD4Q8IYR2 804 aaPredicted RBP17.43■□□□□ 0.38
CHD1L-205ENST00000467213 TRIM58Q8NG06 486 aa17.43■□□□□ 0.38
CHD1L-205ENST00000467213 MTRQ99707 1265 aa17.43■□□□□ 0.38
CHD1L-205ENST00000467213 MAGEF1Q9HAY2 307 aa17.43■□□□□ 0.38
CHD1L-205ENST00000467213 A1CFQ9NQ94 594 aaKnown RBP17.43■□□□□ 0.38
CHD1L-205ENST00000467213 GGA2Q9UJY4 613 aa17.43■□□□□ 0.38
CHD1L-205ENST00000467213 SHTN1A0MZ66 631 aa17.43■□□□□ 0.38
CHD1L-205ENST00000467213 ERLIN2O94905 339 aa17.43■□□□□ 0.38
CHD1L-205ENST00000467213 HOXA7P31268 230 aaPredicted RBP17.43■□□□□ 0.38
CHD1L-205ENST00000467213 ZCRB1Q8TBF4 217 aaKnown RBP17.43■□□□□ 0.38
CHD1L-205ENST00000467213 CAPS2Q9BXY5 557 aa17.43■□□□□ 0.38
CHD1L-205ENST00000467213 IPO7O95373 1038 aaKnown RBP17.42■□□□□ 0.38
CHD1L-205ENST00000467213 LCA5LO95447 670 aa17.42■□□□□ 0.38
CHD1L-205ENST00000467213 CDC25AP30304 524 aa17.42■□□□□ 0.38
CHD1L-205ENST00000467213 NT5C2P49902 561 aa17.42■□□□□ 0.38
CHD1L-205ENST00000467213 VAV2P52735 878 aa17.42■□□□□ 0.38
CHD1L-205ENST00000467213 GSCP56915 257 aaPredicted RBP17.42■□□□□ 0.38
CHD1L-205ENST00000467213 PTGDRQ13258 359 aa17.42■□□□□ 0.38
CHD1L-205ENST00000467213 COBLL1Q53SF7 1204 aa17.42■□□□□ 0.38
CHD1L-205ENST00000467213 B4GALNT4Q76KP1 1039 aa17.42■□□□□ 0.38
CHD1L-205ENST00000467213 YTHDF3Q7Z739 585 aaKnown RBP17.42■□□□□ 0.38
CHD1L-205ENST00000467213 FAM89AQ96GI7 184 aa17.42■□□□□ 0.38
CHD1L-205ENST00000467213 MYCBPQ99417 103 aaPredicted RBP17.42■□□□□ 0.38
CHD1L-205ENST00000467213 GREM2Q9H772 168 aa17.42■□□□□ 0.38
CHD1L-205ENST00000467213 KAT14Q9H8E8 782 aa17.42■□□□□ 0.38
CHD1L-205ENST00000467213 SNX12Q9UMY4 172 aa17.42■□□□□ 0.38
CHD1L-205ENST00000467213 GRIN2DO15399 1336 aa17.42■□□□□ 0.38
CHD1L-205ENST00000467213 EPHB4P54760 987 aa17.42■□□□□ 0.38
CHD1L-205ENST00000467213 MAGEB6Q8N7X4 407 aa17.42■□□□□ 0.38
CHD1L-205ENST00000467213 DHTKD1Q96HY7 919 aaPredicted RBP17.42■□□□□ 0.38
CHD1L-205ENST00000467213 INCENPQ9NQS7 918 aa17.42■□□□□ 0.38
CHD1L-205ENST00000467213 SLC5A1P13866 664 aa17.41■□□□□ 0.38
CHD1L-205ENST00000467213 PRCPP42785 496 aa17.41■□□□□ 0.38
CHD1L-205ENST00000467213 TDO2P48775 406 aa17.41■□□□□ 0.38
CHD1L-205ENST00000467213 EARS2Q5JPH6 523 aaKnown RBP17.41■□□□□ 0.38
CHD1L-205ENST00000467213 CCDC91Q7Z6B0 441 aa17.41■□□□□ 0.38
CHD1L-205ENST00000467213 KIAA1328Q86T90 577 aa17.41■□□□□ 0.38
CHD1L-205ENST00000467213 NLRP10Q86W26 655 aa17.41■□□□□ 0.38
CHD1L-205ENST00000467213 RNF14Q9UBS8 474 aa17.41■□□□□ 0.38
CHD1L-205ENST00000467213 FAM169AQ9Y6X4 670 aa17.41■□□□□ 0.38
CHD1L-205ENST00000467213 PDE8AO60658 829 aa17.41■□□□□ 0.38
CHD1L-205ENST00000467213 RHOBTB3O94955 611 aa17.41■□□□□ 0.38
CHD1L-205ENST00000467213 PPARAQ07869 468 aa17.41■□□□□ 0.38
CHD1L-205ENST00000467213 ARHGAP27Q6ZUM4 889 aa17.41■□□□□ 0.38
CHD1L-205ENST00000467213 PLCD3Q8N3E9 789 aa17.41■□□□□ 0.38
CHD1L-205ENST00000467213 ERGIC2Q96RQ1 377 aa17.41■□□□□ 0.38
CHD1L-205ENST00000467213 CUEDC2Q9H467 287 aa17.41■□□□□ 0.38
CHD1L-205ENST00000467213 ARMT1Q9H993 441 aa17.41■□□□□ 0.38
CHD1L-205ENST00000467213 HDAC6Q9UBN7 1215 aa17.41■□□□□ 0.38
CHD1L-205ENST00000467213 TOGARAM1Q9Y4F4 1720 aa17.41■□□□□ 0.38
CHD1L-205ENST00000467213 TCP1P17987 556 aaKnown RBP17.4■□□□□ 0.38
CHD1L-205ENST00000467213 CASP1P29466 404 aa17.4■□□□□ 0.38
CHD1L-205ENST00000467213 CREG2Q8IUH2 290 aa17.4■□□□□ 0.38
CHD1L-205ENST00000467213 FAM114A1Q8IWE2 563 aa17.4■□□□□ 0.38
CHD1L-205ENST00000467213 ZSCAN29Q8IWY8 852 aaPredicted RBP17.4■□□□□ 0.38
CHD1L-205ENST00000467213 CNPY4Q8N129 248 aa17.4■□□□□ 0.38
CHD1L-205ENST00000467213 VPS54Q9P1Q0 977 aa17.4■□□□□ 0.38
CHD1L-205ENST00000467213 TRIM10Q9UDY6 481 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms