RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 FADS2P1A8MWK0 482 aa5.43□□□□□ -1.54
GTF3C3-209ENST00000466862 C9IYK1 514 aa5.43□□□□□ -1.54
GTF3C3-209ENST00000466862 RPL10P27635 214 aaKnown RBP5.43□□□□□ -1.54
GTF3C3-209ENST00000466862 SLCO6A1Q86UG4 719 aa5.43□□□□□ -1.54
GTF3C3-209ENST00000466862 PPFIBP1Q86W92 1011 aa5.43□□□□□ -1.54
GTF3C3-209ENST00000466862 SPON2Q9BUD6 331 aa5.43□□□□□ -1.54
GTF3C3-209ENST00000466862 ASCC2Q9H1I8 757 aaPredicted RBP5.43□□□□□ -1.54
GTF3C3-209ENST00000466862 CRTAC1Q9NQ79 661 aa5.43□□□□□ -1.54
GTF3C3-209ENST00000466862 CHST7Q9NS84 486 aa5.43□□□□□ -1.54
GTF3C3-209ENST00000466862 RAPGEFL1Q9UHV5 662 aa5.43□□□□□ -1.54
GTF3C3-209ENST00000466862 FKTNO75072 461 aa5.42□□□□□ -1.54
GTF3C3-209ENST00000466862 RECKO95980 971 aa5.42□□□□□ -1.54
GTF3C3-209ENST00000466862 BMP8BP34820 402 aa5.42□□□□□ -1.54
GTF3C3-209ENST00000466862 ERVFRD-1P60508 538 aa5.42□□□□□ -1.54
GTF3C3-209ENST00000466862 LRRFIP1Q32MZ4 808 aaKnown RBP5.42□□□□□ -1.54
GTF3C3-209ENST00000466862 ZNF394Q53GI3 561 aa5.42□□□□□ -1.54
GTF3C3-209ENST00000466862 CRTC3Q6UUV7 619 aa5.42□□□□□ -1.54
GTF3C3-209ENST00000466862 TTLL10Q6ZVT0 673 aa5.42□□□□□ -1.54
GTF3C3-209ENST00000466862 METTL5Q9NRN9 209 aaKnown RBP5.42□□□□□ -1.54
GTF3C3-209ENST00000466862 GFOD1Q9NXC2 390 aa5.42□□□□□ -1.54
GTF3C3-209ENST00000466862 SUCOQ9UBS9 1254 aaKnown RBP5.42□□□□□ -1.54
GTF3C3-209ENST00000466862 MBD1Q9UIS9 605 aaPredicted RBP5.42□□□□□ -1.54
GTF3C3-209ENST00000466862 GPR55Q9Y2T6 319 aaPredicted RBP5.42□□□□□ -1.54
GTF3C3-209ENST00000466862 OR14I1A6ND48 311 aa5.41□□□□□ -1.54
GTF3C3-209ENST00000466862 ZNF76P36508 570 aa5.41□□□□□ -1.54
GTF3C3-209ENST00000466862 CHMP4BP1P59074 171 aa5.41□□□□□ -1.54
GTF3C3-209ENST00000466862 KIR3DS1Q14943 382 aa5.41□□□□□ -1.54
GTF3C3-209ENST00000466862 HSF5Q4G112 596 aaPredicted RBP5.41□□□□□ -1.54
GTF3C3-209ENST00000466862 RTP2Q5QGT7 225 aa5.41□□□□□ -1.54
GTF3C3-209ENST00000466862 ADGRF1Q5T601 910 aa5.41□□□□□ -1.54
GTF3C3-209ENST00000466862 CIAPIN1Q6FI81 312 aa5.41□□□□□ -1.54
GTF3C3-209ENST00000466862 LILRA6Q6PI73 481 aa5.41□□□□□ -1.54
GTF3C3-209ENST00000466862 CEP128Q6ZU80 1094 aa5.41□□□□□ -1.54
GTF3C3-209ENST00000466862 TMEM87AQ8NBN3 555 aa5.41□□□□□ -1.54
GTF3C3-209ENST00000466862 SYTL4Q96C24 671 aaPredicted RBP5.41□□□□□ -1.54
GTF3C3-209ENST00000466862 BACH2Q9BYV9 841 aa5.41□□□□□ -1.54
GTF3C3-209ENST00000466862 MKRN2Q9H000 416 aaKnown RBP5.41□□□□□ -1.54
GTF3C3-209ENST00000466862 PCDHB12Q9Y5F1 795 aa5.41□□□□□ -1.54
GTF3C3-209ENST00000466862 PCDHGB7Q9Y5F8 929 aa5.41□□□□□ -1.54
GTF3C3-209ENST00000466862 MCM4P33991 863 aa5.4□□□□□ -1.54
GTF3C3-209ENST00000466862 PDE6BP35913 854 aa5.4□□□□□ -1.54
GTF3C3-209ENST00000466862 YBX1P67809 324 aaKnown RBP5.4□□□□□ -1.54
GTF3C3-209ENST00000466862 AUHQ13825 339 aaKnown RBP5.4□□□□□ -1.54
GTF3C3-209ENST00000466862 INTS3Q68E01 1043 aaKnown RBP5.4□□□□□ -1.54
GTF3C3-209ENST00000466862 USP48Q86UV5 1035 aa5.4□□□□□ -1.54
GTF3C3-209ENST00000466862 SIRT2Q8IXJ6 389 aa5.4□□□□□ -1.54
GTF3C3-209ENST00000466862 RBBP8NLQ8NC74 664 aaPredicted RBP5.4□□□□□ -1.54
GTF3C3-209ENST00000466862 KCNN1Q92952 543 aa5.4□□□□□ -1.54
GTF3C3-209ENST00000466862 SGPP1Q9BX95 441 aa5.4□□□□□ -1.54
GTF3C3-209ENST00000466862 TNFRSF12AQ9NP84 129 aa5.4□□□□□ -1.54
GTF3C3-209ENST00000466862 TNFRSF10DQ9UBN6 386 aa5.4□□□□□ -1.54
GTF3C3-209ENST00000466862 ZMYM5Q9UJ78 669 aa5.4□□□□□ -1.54
GTF3C3-209ENST00000466862 NUAK1O60285 661 aa5.39□□□□□ -1.55
GTF3C3-209ENST00000466862 PNLIPP16233 465 aa5.39□□□□□ -1.55
GTF3C3-209ENST00000466862 BUD31P41223 144 aaPredicted RBP5.39□□□□□ -1.55
GTF3C3-209ENST00000466862 PMS1P54277 932 aaKnown RBP5.39□□□□□ -1.55
GTF3C3-209ENST00000466862 EPHB3P54753 998 aa5.39□□□□□ -1.55
GTF3C3-209ENST00000466862 RTP1P59025 263 aa5.39□□□□□ -1.55
GTF3C3-209ENST00000466862 RACK1P63244 317 aaKnown RBP5.39□□□□□ -1.55
GTF3C3-209ENST00000466862 SSPNQ14714 243 aa5.39□□□□□ -1.55
GTF3C3-209ENST00000466862 ZYXQ15942 572 aaKnown RBP5.39□□□□□ -1.55
GTF3C3-209ENST00000466862 C7orf61Q8IZ16 206 aa5.39□□□□□ -1.55
GTF3C3-209ENST00000466862 TMEM52Q8NDY8 209 aa5.39□□□□□ -1.55
GTF3C3-209ENST00000466862 KRTAP9-3Q9BYQ3 159 aa5.39□□□□□ -1.55
GTF3C3-209ENST00000466862 MEIS1O00470 390 aa5.38□□□□□ -1.55
GTF3C3-209ENST00000466862 IRS4O14654 1257 aaPredicted RBP5.38□□□□□ -1.55
GTF3C3-209ENST00000466862 INHBBP09529 407 aa5.38□□□□□ -1.55
GTF3C3-209ENST00000466862 IMPDH2P12268 514 aa5.38□□□□□ -1.55
GTF3C3-209ENST00000466862 VAV1P15498 845 aa5.38□□□□□ -1.55
GTF3C3-209ENST00000466862 ENDOUP21128 410 aaKnown RBP5.38□□□□□ -1.55
GTF3C3-209ENST00000466862 VIPR1P32241 457 aa5.38□□□□□ -1.55
GTF3C3-209ENST00000466862 TMCO4Q5TGY1 634 aa5.38□□□□□ -1.55
GTF3C3-209ENST00000466862 TDRD10Q5VZ19 366 aaKnown RBP5.38□□□□□ -1.55
GTF3C3-209ENST00000466862 LSRQ86X29 649 aaPredicted RBP5.38□□□□□ -1.55
GTF3C3-209ENST00000466862 SMARCC1Q92922 1105 aaPredicted RBP5.38□□□□□ -1.55
GTF3C3-209ENST00000466862 TM9SF2Q99805 663 aa5.38□□□□□ -1.55
GTF3C3-209ENST00000466862 SLC12A9Q9BXP2 914 aa5.38□□□□□ -1.55
GTF3C3-209ENST00000466862 SRRTQ9BXP5 876 aaKnown RBP5.38□□□□□ -1.55
GTF3C3-209ENST00000466862 EPB41L4AQ9HCS5 686 aaPredicted RBP5.38□□□□□ -1.55
GTF3C3-209ENST00000466862 AP5S1Q9NUS5 200 aa5.38□□□□□ -1.55
GTF3C3-209ENST00000466862 NCANO14594 1321 aa5.38□□□□□ -1.55
GTF3C3-209ENST00000466862 ADAMTS20P59510 1910 aa5.37□□□□□ -1.55
GTF3C3-209ENST00000466862 FAM86C2PA6NEL3 165 aa5.37□□□□□ -1.55
GTF3C3-209ENST00000466862 PRRG2O14669 202 aa5.37□□□□□ -1.55
GTF3C3-209ENST00000466862 SDHBP21912 280 aa5.37□□□□□ -1.55
GTF3C3-209ENST00000466862 VAMP1P23763 118 aa5.37□□□□□ -1.55
GTF3C3-209ENST00000466862 AXDND1Q5T1B0 1012 aaPredicted RBP5.37□□□□□ -1.55
GTF3C3-209ENST00000466862 DCAF15Q66K64 600 aa5.37□□□□□ -1.55
GTF3C3-209ENST00000466862 GALNT18Q6P9A2 607 aa5.37□□□□□ -1.55
GTF3C3-209ENST00000466862 METTL16Q86W50 562 aaKnown RBP5.37□□□□□ -1.55
GTF3C3-209ENST00000466862 JMJD8Q96S16 334 aa5.37□□□□□ -1.55
GTF3C3-209ENST00000466862 IRF2BPLQ9H1B7 796 aa5.37□□□□□ -1.55
GTF3C3-209ENST00000466862 CNTD2Q9H8S5 307 aa5.37□□□□□ -1.55
GTF3C3-209ENST00000466862 DDX41Q9UJV9 622 aaKnown RBP5.37□□□□□ -1.55
GTF3C3-209ENST00000466862 ACSL6Q9UKU0 697 aa5.37□□□□□ -1.55
GTF3C3-209ENST00000466862 PPT2Q9UMR5 302 aa5.37□□□□□ -1.55
GTF3C3-209ENST00000466862 TAF6LQ9Y6J9 622 aa5.37□□□□□ -1.55
GTF3C3-209ENST00000466862 A0A1W2PQ45 241 aaPredicted RBP5.36□□□□□ -1.55
GTF3C3-209ENST00000466862 A0A1W2PQY0 241 aa5.36□□□□□ -1.55
GTF3C3-209ENST00000466862 SSU72P8A0A1W2PR75 194 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms