RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 CYP2B6P20813 491 aa8.26□□□□□ -1.09
CLDN4-204ENST00000466411 FECHP22830 423 aa8.26□□□□□ -1.09
CLDN4-204ENST00000466411 USP5P45974 858 aa8.26□□□□□ -1.09
CLDN4-204ENST00000466411 FOSBP53539 338 aa8.26□□□□□ -1.09
CLDN4-204ENST00000466411 MAP2K5Q13163 448 aa8.26□□□□□ -1.09
CLDN4-204ENST00000466411 HIC1Q14526 733 aa8.26□□□□□ -1.09
CLDN4-204ENST00000466411 AAK1Q2M2I8 961 aa8.26□□□□□ -1.09
CLDN4-204ENST00000466411 TSR1Q2NL82 804 aaKnown RBP8.26□□□□□ -1.09
CLDN4-204ENST00000466411 C1orf53Q5VUE5 145 aa8.26□□□□□ -1.09
CLDN4-204ENST00000466411 TYW1BQ6NUM6 668 aa8.26□□□□□ -1.09
CLDN4-204ENST00000466411 TTC6Q86TZ1 520 aa8.26□□□□□ -1.09
CLDN4-204ENST00000466411 RILPL2Q969X0 211 aa8.26□□□□□ -1.09
CLDN4-204ENST00000466411 TBC1D2Q9BYX2 928 aa8.26□□□□□ -1.09
CLDN4-204ENST00000466411 ANTXR1Q9H6X2 564 aa8.26□□□□□ -1.09
CLDN4-204ENST00000466411 ARPP21Q9UBL0 812 aaPredicted RBP8.26□□□□□ -1.09
CLDN4-204ENST00000466411 KMT2BQ9UMN6 2715 aaPredicted RBP8.26□□□□□ -1.09
CLDN4-204ENST00000466411 TRIOO75962 3097 aa8.25□□□□□ -1.09
CLDN4-204ENST00000466411 LAMA4Q16363 1823 aa8.25□□□□□ -1.09
CLDN4-204ENST00000466411 DNM1LO00429 736 aa8.25□□□□□ -1.09
CLDN4-204ENST00000466411 IGHA2P01877 340 aa8.25□□□□□ -1.09
CLDN4-204ENST00000466411 PTPRAP18433 802 aa8.25□□□□□ -1.09
CLDN4-204ENST00000466411 IGFBP4P22692 258 aa8.25□□□□□ -1.09
CLDN4-204ENST00000466411 RGS3P49796 1198 aa8.25□□□□□ -1.09
CLDN4-204ENST00000466411 RHBDL3P58872 404 aa8.25□□□□□ -1.09
CLDN4-204ENST00000466411 CCL14Q16627 93 aa8.25□□□□□ -1.09
CLDN4-204ENST00000466411 MCMDC2Q4G0Z9 681 aa8.25□□□□□ -1.09
CLDN4-204ENST00000466411 ZMYM1Q5SVZ6 1142 aa8.25□□□□□ -1.09
CLDN4-204ENST00000466411 TREML2Q5T2D2 321 aa8.25□□□□□ -1.09
CLDN4-204ENST00000466411 ZSCAN29Q8IWY8 852 aaPredicted RBP8.25□□□□□ -1.09
CLDN4-204ENST00000466411 OTUD7AQ8TE49 926 aaPredicted RBP8.25□□□□□ -1.09
CLDN4-204ENST00000466411 SMCR8Q8TEV9 937 aaPredicted RBP8.25□□□□□ -1.09
CLDN4-204ENST00000466411 ANKS1AQ92625 1134 aa8.25□□□□□ -1.09
CLDN4-204ENST00000466411 RIOK1Q9BRS2 568 aaKnown RBP8.25□□□□□ -1.09
CLDN4-204ENST00000466411 OSBPL5Q9H0X9 879 aaPredicted RBP8.25□□□□□ -1.09
CLDN4-204ENST00000466411 EHD4Q9H223 541 aa8.25□□□□□ -1.09
CLDN4-204ENST00000466411 PI4KBQ9UBF8 816 aa8.25□□□□□ -1.09
CLDN4-204ENST00000466411 AGTPBP1Q9UPW5 1226 aa8.25□□□□□ -1.09
CLDN4-204ENST00000466411 ATP11BQ9Y2G3 1177 aa8.25□□□□□ -1.09
CLDN4-204ENST00000466411 ZHX2Q9Y6X8 837 aa8.25□□□□□ -1.09
CLDN4-204ENST00000466411 GBF1Q92538 1859 aa8.25□□□□□ -1.09
CLDN4-204ENST00000466411 PKD1L2Q7Z442 2459 aa8.25□□□□□ -1.09
CLDN4-204ENST00000466411 FLT1P17948 1338 aa8.25□□□□□ -1.09
CLDN4-204ENST00000466411 ZFHX4Q86UP3 3567 aa8.24□□□□□ -1.09
CLDN4-204ENST00000466411 DOCK1Q14185 1865 aa8.24□□□□□ -1.09
CLDN4-204ENST00000466411 CACNA1HO95180 2353 aa8.24□□□□□ -1.09
CLDN4-204ENST00000466411 TRIM66O15016 1216 aa8.24□□□□□ -1.09
CLDN4-204ENST00000466411 KRT37O76014 449 aa8.24□□□□□ -1.09
CLDN4-204ENST00000466411 MBD4O95243 580 aa8.24□□□□□ -1.09
CLDN4-204ENST00000466411 PCP11498 1178 aaKnown RBP8.24□□□□□ -1.09
CLDN4-204ENST00000466411 POU3F3P20264 500 aaPredicted RBP8.24□□□□□ -1.09
CLDN4-204ENST00000466411 TRIM60Q495X7 471 aa8.24□□□□□ -1.09
CLDN4-204ENST00000466411 PPP4R3BQ5MIZ7 849 aa8.24□□□□□ -1.09
CLDN4-204ENST00000466411 TSHZ3Q63HK5 1081 aa8.24□□□□□ -1.09
CLDN4-204ENST00000466411 GADL1Q6ZQY3 521 aa8.24□□□□□ -1.09
CLDN4-204ENST00000466411 C16orf59Q7L2K0 433 aa8.24□□□□□ -1.09
CLDN4-204ENST00000466411 FOXP4Q8IVH2 680 aaPredicted RBP8.24□□□□□ -1.09
CLDN4-204ENST00000466411 CRACR2BQ8N4Y2 399 aaPredicted RBP8.24□□□□□ -1.09
CLDN4-204ENST00000466411 ZNF454Q8N9F8 522 aa8.24□□□□□ -1.09
CLDN4-204ENST00000466411 MIGA1Q8NAN2 632 aa8.24□□□□□ -1.09
CLDN4-204ENST00000466411 ZNF384Q8TF68 577 aa8.24□□□□□ -1.09
CLDN4-204ENST00000466411 LPAR1Q92633 364 aa8.24□□□□□ -1.09
CLDN4-204ENST00000466411 PRDM5Q9NQX1 630 aaPredicted RBP8.24□□□□□ -1.09
CLDN4-204ENST00000466411 NPDC1Q9NQX5 325 aaPredicted RBP8.24□□□□□ -1.09
CLDN4-204ENST00000466411 MORF4L1Q9UBU8 362 aa8.24□□□□□ -1.09
CLDN4-204ENST00000466411 SWAP70Q9UH65 585 aa8.24□□□□□ -1.09
CLDN4-204ENST00000466411 EPG5Q9HCE0 2579 aa8.24□□□□□ -1.09
CLDN4-204ENST00000466411 ATAD5Q96QE3 1844 aa8.24□□□□□ -1.09
CLDN4-204ENST00000466411 PATL2C9JE40 543 aaKnown RBP8.23□□□□□ -1.09
CLDN4-204ENST00000466411 KIAA0355O15063 1070 aa8.23□□□□□ -1.09
CLDN4-204ENST00000466411 GPAA1O43292 621 aa8.23□□□□□ -1.09
CLDN4-204ENST00000466411 EPB41L2O43491 1005 aaKnown RBP8.23□□□□□ -1.09
CLDN4-204ENST00000466411 SDSP20132 328 aa8.23□□□□□ -1.09
CLDN4-204ENST00000466411 GCLCP48506 637 aaPredicted RBP8.23□□□□□ -1.09
CLDN4-204ENST00000466411 MAP3K10Q02779 954 aa8.23□□□□□ -1.09
CLDN4-204ENST00000466411 PICALMQ13492 652 aa8.23□□□□□ -1.09
CLDN4-204ENST00000466411 MORN1Q5T089 497 aa8.23□□□□□ -1.09
CLDN4-204ENST00000466411 ADGRA1Q86SQ6 560 aa8.23□□□□□ -1.09
CLDN4-204ENST00000466411 TRMT44Q8IYL2 757 aaKnown RBP8.23□□□□□ -1.09
CLDN4-204ENST00000466411 ZNF710Q8N1W2 664 aa8.23□□□□□ -1.09
CLDN4-204ENST00000466411 SH3RF3Q8TEJ3 882 aaPredicted RBP8.23□□□□□ -1.09
CLDN4-204ENST00000466411 TGFBRAP1Q8WUH2 860 aa8.23□□□□□ -1.09
CLDN4-204ENST00000466411 HERVK_113Q902F9 699 aa8.23□□□□□ -1.09
CLDN4-204ENST00000466411 FAM198AQ9UFP1 575 aa8.23□□□□□ -1.09
CLDN4-204ENST00000466411 CTNNA3Q9UI47 895 aa8.23□□□□□ -1.09
CLDN4-204ENST00000466411 SERPINB13Q9UIV8 391 aa8.23□□□□□ -1.09
CLDN4-204ENST00000466411 NDUFB9Q9Y6M9 179 aa8.23□□□□□ -1.09
CLDN4-204ENST00000466411 SLC4A4Q9Y6R1 1079 aa8.23□□□□□ -1.09
CLDN4-204ENST00000466411 CCDC171Q6TFL3 1326 aa8.23□□□□□ -1.09
CLDN4-204ENST00000466411 RIF1Q5UIP0 2472 aaKnown RBP8.23□□□□□ -1.09
CLDN4-204ENST00000466411 BAZ2AQ9UIF9 1905 aaKnown RBP8.23□□□□□ -1.09
CLDN4-204ENST00000466411 ROBO3Q96MS0 1386 aa8.22□□□□□ -1.09
CLDN4-204ENST00000466411 TPRP12270 2363 aaKnown RBP8.22□□□□□ -1.09
CLDN4-204ENST00000466411 ZFHX2Q9C0A1 2572 aaPredicted RBP8.22□□□□□ -1.09
CLDN4-204ENST00000466411 CDC45O75419 566 aa8.22□□□□□ -1.09
CLDN4-204ENST00000466411 RGS20O76081 388 aa8.22□□□□□ -1.09
CLDN4-204ENST00000466411 APPP05067 770 aa8.22□□□□□ -1.09
CLDN4-204ENST00000466411 POLR3DP05423 398 aaPredicted RBP8.22□□□□□ -1.09
CLDN4-204ENST00000466411 TDO2P48775 406 aa8.22□□□□□ -1.09
CLDN4-204ENST00000466411 TLE2Q04725 743 aa8.22□□□□□ -1.09
CLDN4-204ENST00000466411 ALX1Q15699 326 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms