RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 COA7Q96BR5 231 aa14.51□□□□□ -0.09
CHPF2-202ENST00000465601 NEK1Q96PY6 1258 aa14.51□□□□□ -0.09
CHPF2-202ENST00000465601 MOV10L1Q9BXT6 1211 aaKnown RBP14.51□□□□□ -0.09
CHPF2-202ENST00000465601 PTCH2Q9Y6C5 1203 aa14.51□□□□□ -0.09
CHPF2-202ENST00000465601 CENPFP49454 3210 aa14.51□□□□□ -0.09
CHPF2-202ENST00000465601 A0A0G2JMZ2 1700 aa14.5□□□□□ -0.09
CHPF2-202ENST00000465601 PLA2G6O60733 806 aa14.5□□□□□ -0.09
CHPF2-202ENST00000465601 GOLGA8HP0CJ92 632 aa14.5□□□□□ -0.09
CHPF2-202ENST00000465601 SNHG28P0DPA3 235 aa14.5□□□□□ -0.09
CHPF2-202ENST00000465601 MAPK4P31152 587 aa14.5□□□□□ -0.09
CHPF2-202ENST00000465601 STAT3P40763 770 aa14.5□□□□□ -0.09
CHPF2-202ENST00000465601 FLT3LGP49771 235 aa14.5□□□□□ -0.09
CHPF2-202ENST00000465601 PRMT2P55345 433 aa14.5□□□□□ -0.09
CHPF2-202ENST00000465601 SNAP25P60880 206 aa14.5□□□□□ -0.09
CHPF2-202ENST00000465601 ZNF543Q08ER8 600 aa14.5□□□□□ -0.09
CHPF2-202ENST00000465601 KRT32Q14532 448 aa14.5□□□□□ -0.09
CHPF2-202ENST00000465601 GPR142Q7Z601 462 aa14.5□□□□□ -0.09
CHPF2-202ENST00000465601 PLEKHH3Q7Z736 793 aa14.5□□□□□ -0.09
CHPF2-202ENST00000465601 CPXCR1Q8N123 301 aa14.5□□□□□ -0.09
CHPF2-202ENST00000465601 LRRC2Q9BYS8 371 aa14.5□□□□□ -0.09
CHPF2-202ENST00000465601 CWC22Q9HCG8 908 aaKnown RBP14.5□□□□□ -0.09
CHPF2-202ENST00000465601 PRR12Q9ULL5 1215 aa14.5□□□□□ -0.09
CHPF2-202ENST00000465601 CTDP1Q9Y5B0 961 aaPredicted RBP14.5□□□□□ -0.09
CHPF2-202ENST00000465601 SNX14Q9Y5W7 946 aa14.5□□□□□ -0.09
CHPF2-202ENST00000465601 EPB41L2O43491 1005 aaKnown RBP14.49□□□□□ -0.09
CHPF2-202ENST00000465601 ERCC3P19447 782 aa14.49□□□□□ -0.09
CHPF2-202ENST00000465601 SLC4A3P48751 1232 aa14.49□□□□□ -0.09
CHPF2-202ENST00000465601 BTNL9Q6UXG8 535 aa14.49□□□□□ -0.09
CHPF2-202ENST00000465601 NCAPG2Q86XI2 1143 aa14.49□□□□□ -0.09
CHPF2-202ENST00000465601 RAET1EQ8TD07 263 aa14.49□□□□□ -0.09
CHPF2-202ENST00000465601 ABHD8Q96I13 439 aa14.49□□□□□ -0.09
CHPF2-202ENST00000465601 TCEANC2Q96MN5 208 aa14.49□□□□□ -0.09
CHPF2-202ENST00000465601 LY9Q9HBG7 655 aa14.49□□□□□ -0.09
CHPF2-202ENST00000465601 SLC38A10Q9HBR0 1119 aa14.49□□□□□ -0.09
CHPF2-202ENST00000465601 RAVER2Q9HCJ3 691 aaKnown RBP14.49□□□□□ -0.09
CHPF2-202ENST00000465601 GJD2Q9UKL4 321 aa14.49□□□□□ -0.09
CHPF2-202ENST00000465601 ZNF214Q9UL59 606 aaPredicted RBP14.49□□□□□ -0.09
CHPF2-202ENST00000465601 HPS5Q9UPZ3 1129 aa14.49□□□□□ -0.09
CHPF2-202ENST00000465601 PLXNB2O15031 1838 aa14.49□□□□□ -0.09
CHPF2-202ENST00000465601 MYH6P13533 1939 aa14.49□□□□□ -0.09
CHPF2-202ENST00000465601 SH2B2O14492 632 aaPredicted RBP14.48□□□□□ -0.09
CHPF2-202ENST00000465601 PARP1P09874 1014 aaKnown RBP14.48□□□□□ -0.09
CHPF2-202ENST00000465601 CPA1P15085 419 aa14.48□□□□□ -0.09
CHPF2-202ENST00000465601 EXOSC10Q01780 885 aaKnown RBP14.48□□□□□ -0.09
CHPF2-202ENST00000465601 SYDE2Q5VT97 1194 aa14.48□□□□□ -0.09
CHPF2-202ENST00000465601 DHX32Q7L7V1 743 aaKnown RBP14.48□□□□□ -0.09
CHPF2-202ENST00000465601 RIOX2Q8IUF8 465 aa14.48□□□□□ -0.09
CHPF2-202ENST00000465601 SHCBP1Q8NEM2 672 aa14.48□□□□□ -0.09
CHPF2-202ENST00000465601 TMEM87BQ96K49 555 aa14.48□□□□□ -0.09
CHPF2-202ENST00000465601 JAKMIP1Q96N16 626 aaKnown RBP14.48□□□□□ -0.09
CHPF2-202ENST00000465601 MTA3Q9BTC8 594 aa14.48□□□□□ -0.09
CHPF2-202ENST00000465601 UBA5Q9GZZ9 404 aa14.48□□□□□ -0.09
CHPF2-202ENST00000465601 CPVLQ9H3G5 476 aa14.48□□□□□ -0.09
CHPF2-202ENST00000465601 SEC24BO95487 1268 aa14.47□□□□□ -0.09
CHPF2-202ENST00000465601 SLC25A27O95847 323 aa14.47□□□□□ -0.09
CHPF2-202ENST00000465601 FDX1P10109 184 aa14.47□□□□□ -0.09
CHPF2-202ENST00000465601 CYP2B6P20813 491 aa14.47□□□□□ -0.09
CHPF2-202ENST00000465601 PTPREP23469 700 aa14.47□□□□□ -0.09
CHPF2-202ENST00000465601 GPATCH4Q5T3I0 446 aaKnown RBP14.47□□□□□ -0.09
CHPF2-202ENST00000465601 SNRNP48Q6IEG0 339 aaKnown RBP14.47□□□□□ -0.09
CHPF2-202ENST00000465601 CCDC174Q6PII3 467 aa14.47□□□□□ -0.09
CHPF2-202ENST00000465601 NFXL1Q6ZNB6 911 aa14.47□□□□□ -0.09
CHPF2-202ENST00000465601 NUDT12Q9BQG2 462 aa14.47□□□□□ -0.09
CHPF2-202ENST00000465601 TEX13BQ9BXU2 312 aa14.47□□□□□ -0.09
CHPF2-202ENST00000465601 MROH8Q9H579 483 aa14.47□□□□□ -0.09
CHPF2-202ENST00000465601 RIPK3Q9Y572 518 aa14.47□□□□□ -0.09
CHPF2-202ENST00000465601 IVNS1ABPQ9Y6Y0 642 aa14.47□□□□□ -0.09
CHPF2-202ENST00000465601 ATP2A1O14983 1001 aa14.46□□□□□ -0.09
CHPF2-202ENST00000465601 ADCY3O60266 1144 aa14.46□□□□□ -0.09
CHPF2-202ENST00000465601 ASPRV1Q53RT3 343 aa14.46□□□□□ -0.09
CHPF2-202ENST00000465601 MORN1Q5T089 497 aa14.46□□□□□ -0.09
CHPF2-202ENST00000465601 CATIPQ7Z7H3 387 aa14.46□□□□□ -0.09
CHPF2-202ENST00000465601 TMTC2Q8N394 836 aa14.46□□□□□ -0.09
CHPF2-202ENST00000465601 STAG2Q8N3U4 1231 aa14.46□□□□□ -0.09
CHPF2-202ENST00000465601 SH3TC2Q8TF17 1288 aa14.46□□□□□ -0.09
CHPF2-202ENST00000465601 NUP133Q8WUM0 1156 aa14.46□□□□□ -0.09
CHPF2-202ENST00000465601 AGBL1Q96MI9 1066 aa14.46□□□□□ -0.09
CHPF2-202ENST00000465601 MYL10Q9BUA6 226 aa14.46□□□□□ -0.09
CHPF2-202ENST00000465601 ZNF536O15090 1300 aa14.45□□□□□ -0.1
CHPF2-202ENST00000465601 CCDC69A6NI79 296 aa14.45□□□□□ -0.1
CHPF2-202ENST00000465601 SLC15A5A6NIM6 579 aa14.45□□□□□ -0.1
CHPF2-202ENST00000465601 HMGB1P09429 215 aaKnown RBP14.45□□□□□ -0.1
CHPF2-202ENST00000465601 ELNP15502 786 aa14.45□□□□□ -0.1
CHPF2-202ENST00000465601 GRK4P32298 578 aa14.45□□□□□ -0.1
CHPF2-202ENST00000465601 LIFRP42702 1097 aa14.45□□□□□ -0.1
CHPF2-202ENST00000465601 OAZ1P54368 228 aa14.45□□□□□ -0.1
CHPF2-202ENST00000465601 TROAPQ12815 778 aa14.45□□□□□ -0.1
CHPF2-202ENST00000465601 IRF5Q13568 498 aa14.45□□□□□ -0.1
CHPF2-202ENST00000465601 GRM4Q14833 912 aa14.45□□□□□ -0.1
CHPF2-202ENST00000465601 C8orf34Q49A92 452 aa14.45□□□□□ -0.1
CHPF2-202ENST00000465601 SLC9C1Q4G0N8 1177 aa14.45□□□□□ -0.1
CHPF2-202ENST00000465601 BLOC1S2Q6QNY1 142 aa14.45□□□□□ -0.1
CHPF2-202ENST00000465601 ZNF654Q8IZM8 581 aa14.45□□□□□ -0.1
CHPF2-202ENST00000465601 SOCS4Q8WXH5 440 aa14.45□□□□□ -0.1
CHPF2-202ENST00000465601 USP6NLQ92738 828 aa14.45□□□□□ -0.1
CHPF2-202ENST00000465601 RANBP17Q9H2T7 1088 aaKnown RBP14.45□□□□□ -0.1
CHPF2-202ENST00000465601 VAT1LQ9HCJ6 419 aa14.45□□□□□ -0.1
CHPF2-202ENST00000465601 MAD2L2Q9UI95 211 aa14.45□□□□□ -0.1
CHPF2-202ENST00000465601 WDR19Q8NEZ3 1342 aa14.44□□□□□ -0.1
CHPF2-202ENST00000465601 PALM3A6NDB9 673 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms