RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 CEP128Q6ZU80 1094 aa5.05□□□□□ -1.6
SNX4-202ENST00000465505 SLITRK4Q8IW52 837 aa5.05□□□□□ -1.6
SNX4-202ENST00000465505 GIPC2Q8TF65 315 aa5.05□□□□□ -1.6
SNX4-202ENST00000465505 NT5C1AQ9BXI3 368 aa5.05□□□□□ -1.6
SNX4-202ENST00000465505 MEIS3P2A8K0S8 358 aa5.04□□□□□ -1.6
SNX4-202ENST00000465505 FADS2P1A8MWK0 482 aa5.04□□□□□ -1.6
SNX4-202ENST00000465505 HRKO00198 91 aa5.04□□□□□ -1.6
SNX4-202ENST00000465505 FKTNO75072 461 aa5.04□□□□□ -1.6
SNX4-202ENST00000465505 INHBBP09529 407 aa5.04□□□□□ -1.6
SNX4-202ENST00000465505 PNLIPP16233 465 aa5.04□□□□□ -1.6
SNX4-202ENST00000465505 ZNF165P49910 485 aa5.04□□□□□ -1.6
SNX4-202ENST00000465505 SRSF3P84103 164 aaKnown RBP5.04□□□□□ -1.6
SNX4-202ENST00000465505 LRRFIP1Q32MZ4 808 aaKnown RBP5.04□□□□□ -1.6
SNX4-202ENST00000465505 ADGRF1Q5T601 910 aa5.04□□□□□ -1.6
SNX4-202ENST00000465505 NKD1Q969G9 470 aa5.04□□□□□ -1.6
SNX4-202ENST00000465505 EAF1Q96JC9 268 aaPredicted RBP5.04□□□□□ -1.6
SNX4-202ENST00000465505 SLC9A7Q96T83 725 aa5.04□□□□□ -1.6
SNX4-202ENST00000465505 PLCD4Q9BRC7 762 aa5.04□□□□□ -1.6
SNX4-202ENST00000465505 KRTAP4-2Q9BYR5 136 aa5.04□□□□□ -1.6
SNX4-202ENST00000465505 CHST7Q9NS84 486 aa5.04□□□□□ -1.6
SNX4-202ENST00000465505 TNFRSF10DQ9UBN6 386 aa5.04□□□□□ -1.6
SNX4-202ENST00000465505 MBD1Q9UIS9 605 aaPredicted RBP5.04□□□□□ -1.6
SNX4-202ENST00000465505 CNOT6Q9ULM6 557 aaKnown RBP5.04□□□□□ -1.6
SNX4-202ENST00000465505 CTSKP43235 329 aa5.03□□□□□ -1.6
SNX4-202ENST00000465505 CEBPAP49715 358 aaPredicted RBP5.03□□□□□ -1.6
SNX4-202ENST00000465505 RTP1P59025 263 aa5.03□□□□□ -1.6
SNX4-202ENST00000465505 YBX1P67809 324 aaKnown RBP5.03□□□□□ -1.6
SNX4-202ENST00000465505 INTS3Q68E01 1043 aaKnown RBP5.03□□□□□ -1.6
SNX4-202ENST00000465505 FCRL2Q96LA5 508 aaPredicted RBP5.03□□□□□ -1.6
SNX4-202ENST00000465505 C20orf173Q96LM9 149 aa5.03□□□□□ -1.6
SNX4-202ENST00000465505 SLC6A18Q96N87 628 aa5.03□□□□□ -1.6
SNX4-202ENST00000465505 KCTD3Q9Y597 815 aa5.03□□□□□ -1.6
SNX4-202ENST00000465505 HOXA5P20719 270 aa5.02□□□□□ -1.61
SNX4-202ENST00000465505 SDHBP21912 280 aa5.02□□□□□ -1.61
SNX4-202ENST00000465505 VIPR1P32241 457 aa5.02□□□□□ -1.61
SNX4-202ENST00000465505 BMP8BP34820 402 aa5.02□□□□□ -1.61
SNX4-202ENST00000465505 AUHQ13825 339 aaKnown RBP5.02□□□□□ -1.61
SNX4-202ENST00000465505 SSPNQ14714 243 aa5.02□□□□□ -1.61
SNX4-202ENST00000465505 KIR3DS1Q14943 382 aa5.02□□□□□ -1.61
SNX4-202ENST00000465505 ZNF385BQ569K4 471 aa5.02□□□□□ -1.61
SNX4-202ENST00000465505 PANK1Q8TE04 598 aa5.02□□□□□ -1.61
SNX4-202ENST00000465505 MKRN2Q9H000 416 aaKnown RBP5.02□□□□□ -1.61
SNX4-202ENST00000465505 CNTD2Q9H8S5 307 aa5.02□□□□□ -1.61
SNX4-202ENST00000465505 SIRT5Q9NXA8 310 aa5.02□□□□□ -1.61
SNX4-202ENST00000465505 FBXL21Q9UKT6 434 aa5.02□□□□□ -1.61
SNX4-202ENST00000465505 PCDHB12Q9Y5F1 795 aa5.02□□□□□ -1.61
SNX4-202ENST00000465505 WTIPA6NIX2 430 aaPredicted RBP5.01□□□□□ -1.61
SNX4-202ENST00000465505 MEIS1O00470 390 aa5.01□□□□□ -1.61
SNX4-202ENST00000465505 PRRG2O14669 202 aa5.01□□□□□ -1.61
SNX4-202ENST00000465505 ZNF205O95201 554 aa5.01□□□□□ -1.61
SNX4-202ENST00000465505 ACRP10323 421 aa5.01□□□□□ -1.61
SNX4-202ENST00000465505 VAV1P15498 845 aa5.01□□□□□ -1.61
SNX4-202ENST00000465505 ERVFRD-1P60508 538 aa5.01□□□□□ -1.61
SNX4-202ENST00000465505 HSF5Q4G112 596 aaPredicted RBP5.01□□□□□ -1.61
SNX4-202ENST00000465505 GALNT18Q6P9A2 607 aa5.01□□□□□ -1.61
SNX4-202ENST00000465505 TMEM87AQ8NBN3 555 aa5.01□□□□□ -1.61
SNX4-202ENST00000465505 TMEM52Q8NDY8 209 aa5.01□□□□□ -1.61
SNX4-202ENST00000465505 SIGLEC10Q96LC7 697 aa5.01□□□□□ -1.61
SNX4-202ENST00000465505 SPON2Q9BUD6 331 aa5.01□□□□□ -1.61
SNX4-202ENST00000465505 PARD6AQ9NPB6 346 aa5.01□□□□□ -1.61
SNX4-202ENST00000465505 ERVK13-1Q9NX77 482 aa5.01□□□□□ -1.61
SNX4-202ENST00000465505 GFOD1Q9NXC2 390 aa5.01□□□□□ -1.61
SNX4-202ENST00000465505 PRR13Q9NZ81 148 aa5.01□□□□□ -1.61
SNX4-202ENST00000465505 NCANO14594 1321 aa5□□□□□ -1.61
SNX4-202ENST00000465505 C9IYK1 514 aa5□□□□□ -1.61
SNX4-202ENST00000465505 N4BP3O15049 544 aa5□□□□□ -1.61
SNX4-202ENST00000465505 BMP7P18075 431 aa5□□□□□ -1.61
SNX4-202ENST00000465505 EPHB3P54753 998 aa5□□□□□ -1.61
SNX4-202ENST00000465505 CTSWP56202 376 aa5□□□□□ -1.61
SNX4-202ENST00000465505 TCERG1LQ5VWI1 586 aa5□□□□□ -1.61
SNX4-202ENST00000465505 SLCO6A1Q86UG4 719 aa5□□□□□ -1.61
SNX4-202ENST00000465505 KIAA0825Q8IV33 1275 aa5□□□□□ -1.61
SNX4-202ENST00000465505 MARCH10Q8NA82 808 aaPredicted RBP5□□□□□ -1.61
SNX4-202ENST00000465505 DHRS1Q96LJ7 313 aa5□□□□□ -1.61
SNX4-202ENST00000465505 KCNC2Q96PR1 638 aa5□□□□□ -1.61
SNX4-202ENST00000465505 EPB41L4AQ9HCS5 686 aaPredicted RBP5□□□□□ -1.61
SNX4-202ENST00000465505 KLHL14Q9P2G3 628 aa5□□□□□ -1.61
SNX4-202ENST00000465505 SUCOQ9UBS9 1254 aaKnown RBP5□□□□□ -1.61
SNX4-202ENST00000465505 ACSL6Q9UKU0 697 aa5□□□□□ -1.61
SNX4-202ENST00000465505 GPR55Q9Y2T6 319 aaPredicted RBP5□□□□□ -1.61
SNX4-202ENST00000465505 A0A1W2PQ45 241 aaPredicted RBP4.99□□□□□ -1.61
SNX4-202ENST00000465505 A0A1W2PQY0 241 aa4.99□□□□□ -1.61
SNX4-202ENST00000465505 B8ZZF3 427 aa4.99□□□□□ -1.61
SNX4-202ENST00000465505 ABLIM1O14639 778 aa4.99□□□□□ -1.61
SNX4-202ENST00000465505 SHOXO15266 292 aa4.99□□□□□ -1.61
SNX4-202ENST00000465505 MPOP05164 745 aa4.99□□□□□ -1.61
SNX4-202ENST00000465505 PRKCAP17252 672 aa4.99□□□□□ -1.61
SNX4-202ENST00000465505 PI3P19957 117 aa4.99□□□□□ -1.61
SNX4-202ENST00000465505 ENDOUP21128 410 aaKnown RBP4.99□□□□□ -1.61
SNX4-202ENST00000465505 ANKRD39Q53RE8 183 aa4.99□□□□□ -1.61
SNX4-202ENST00000465505 RTP2Q5QGT7 225 aa4.99□□□□□ -1.61
SNX4-202ENST00000465505 C7orf61Q8IZ16 206 aa4.99□□□□□ -1.61
SNX4-202ENST00000465505 DACT3Q96B18 629 aaPredicted RBP4.99□□□□□ -1.61
SNX4-202ENST00000465505 CDADC1Q9BWV3 514 aa4.99□□□□□ -1.61
SNX4-202ENST00000465505 AP5S1Q9NUS5 200 aa4.99□□□□□ -1.61
SNX4-202ENST00000465505 ZNRF3Q9ULT6 936 aa4.99□□□□□ -1.61
SNX4-202ENST00000465505 IRAK3Q9Y616 596 aa4.99□□□□□ -1.61
SNX4-202ENST00000465505 ADAMTS20P59510 1910 aa4.99□□□□□ -1.61
SNX4-202ENST00000465505 RFXAPO00287 272 aa4.98□□□□□ -1.61
SNX4-202ENST00000465505 IRS4O14654 1257 aaPredicted RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms