RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 FOCADQ5VW36 1801 aa21.18■□□□□ 0.98
TSPAN4-210ENST00000464987 ARHGAP6O43182 974 aa21.18■□□□□ 0.98
TSPAN4-210ENST00000464987 GNAQP50148 359 aa21.18■□□□□ 0.98
TSPAN4-210ENST00000464987 PPP2R2CQ9Y2T4 447 aa21.18■□□□□ 0.98
TSPAN4-210ENST00000464987 SPDYE4A6NLX3 237 aa21.17■□□□□ 0.98
TSPAN4-210ENST00000464987 ETF1P62495 437 aaKnown RBP21.17■□□□□ 0.98
TSPAN4-210ENST00000464987 RRAGBQ5VZM2 374 aa21.17■□□□□ 0.98
TSPAN4-210ENST00000464987 FAM177A1Q8N128 213 aaPredicted RBP21.17■□□□□ 0.98
TSPAN4-210ENST00000464987 PLIN2Q99541 437 aa21.17■□□□□ 0.98
TSPAN4-210ENST00000464987 L2HGDHQ9H9P8 463 aa21.17■□□□□ 0.98
TSPAN4-210ENST00000464987 ADD3Q9UEY8 706 aaKnown RBP21.17■□□□□ 0.98
TSPAN4-210ENST00000464987 MAPK8IP1Q9UQF2 711 aa21.17■□□□□ 0.98
TSPAN4-210ENST00000464987 SLU7O95391 586 aaKnown RBP21.17■□□□□ 0.98
TSPAN4-210ENST00000464987 LONP1P36776 959 aaKnown RBP21.17■□□□□ 0.98
TSPAN4-210ENST00000464987 ELF2Q15723 593 aa21.17■□□□□ 0.98
TSPAN4-210ENST00000464987 NAALADL2Q58DX5 795 aa21.17■□□□□ 0.98
TSPAN4-210ENST00000464987 CEP95Q96GE4 821 aa21.17■□□□□ 0.98
TSPAN4-210ENST00000464987 GDAQ9Y2T3 454 aa21.17■□□□□ 0.98
TSPAN4-210ENST00000464987 C6orf229H3BNL8 230 aa21.16■□□□□ 0.98
TSPAN4-210ENST00000464987 GTPBP6O43824 516 aaPredicted RBP21.16■□□□□ 0.98
TSPAN4-210ENST00000464987 ONECUT3O60422 494 aaPredicted RBP21.16■□□□□ 0.98
TSPAN4-210ENST00000464987 CBX1P83916 185 aa21.16■□□□□ 0.98
TSPAN4-210ENST00000464987 MTF1Q14872 753 aa21.16■□□□□ 0.98
TSPAN4-210ENST00000464987 CCDC93Q567U6 631 aa21.16■□□□□ 0.98
TSPAN4-210ENST00000464987 CCDC178Q5BJE1 867 aa21.16■□□□□ 0.98
TSPAN4-210ENST00000464987 LRRC15Q8TF66 581 aa21.16■□□□□ 0.98
TSPAN4-210ENST00000464987 LTBP1Q14766 1721 aa21.16■□□□□ 0.98
TSPAN4-210ENST00000464987 CT47A1Q5JQC4 288 aaPredicted RBP21.16■□□□□ 0.98
TSPAN4-210ENST00000464987 NEDD1Q8NHV4 660 aa21.16■□□□□ 0.98
TSPAN4-210ENST00000464987 CPLX3Q8WVH0 158 aa21.16■□□□□ 0.98
TSPAN4-210ENST00000464987 ERO1AQ96HE7 468 aa21.16■□□□□ 0.98
TSPAN4-210ENST00000464987 DESI2Q9BSY9 194 aa21.16■□□□□ 0.98
TSPAN4-210ENST00000464987 VAT1LQ9HCJ6 419 aa21.16■□□□□ 0.98
TSPAN4-210ENST00000464987 RIMBP2O15034 1052 aa21.15■□□□□ 0.98
TSPAN4-210ENST00000464987 STX10O60499 249 aa21.15■□□□□ 0.98
TSPAN4-210ENST00000464987 IGSF3O75054 1194 aa21.15■□□□□ 0.98
TSPAN4-210ENST00000464987 PBX1P40424 430 aa21.15■□□□□ 0.98
TSPAN4-210ENST00000464987 STAT6P42226 847 aa21.15■□□□□ 0.98
TSPAN4-210ENST00000464987 RBL2Q08999 1139 aa21.15■□□□□ 0.98
TSPAN4-210ENST00000464987 DAGLBQ8NCG7 672 aa21.15■□□□□ 0.98
TSPAN4-210ENST00000464987 CCDC148Q8NFR7 591 aa21.15■□□□□ 0.98
TSPAN4-210ENST00000464987 DISC1Q9NRI5 854 aa21.15■□□□□ 0.98
TSPAN4-210ENST00000464987 RPN1P04843 607 aaKnown RBP21.14■□□□□ 0.98
TSPAN4-210ENST00000464987 CCT6AP40227 531 aaKnown RBP21.14■□□□□ 0.98
TSPAN4-210ENST00000464987 GTF2IP78347 998 aa21.14■□□□□ 0.98
TSPAN4-210ENST00000464987 DTHD1Q6ZMT9 781 aa21.14■□□□□ 0.98
TSPAN4-210ENST00000464987 F8W031 263 aaPredicted RBP21.14■□□□□ 0.97
TSPAN4-210ENST00000464987 POLRMTO00411 1230 aaKnown RBP21.14■□□□□ 0.97
TSPAN4-210ENST00000464987 CCP110O43303 1012 aa21.14■□□□□ 0.97
TSPAN4-210ENST00000464987 BBOX1O75936 387 aa21.14■□□□□ 0.97
TSPAN4-210ENST00000464987 NT5C2P49902 561 aa21.14■□□□□ 0.97
TSPAN4-210ENST00000464987 FCHSD1Q86WN1 690 aa21.14■□□□□ 0.97
TSPAN4-210ENST00000464987 IGSF22Q8N9C0 903 aa21.14■□□□□ 0.97
TSPAN4-210ENST00000464987 UBA5Q9GZZ9 404 aa21.14■□□□□ 0.97
TSPAN4-210ENST00000464987 GAKO14976 1311 aa21.14■□□□□ 0.97
TSPAN4-210ENST00000464987 ANKRD31Q8N7Z5 1873 aa21.14■□□□□ 0.97
TSPAN4-210ENST00000464987 SOWAHDA6NJG2 315 aa21.13■□□□□ 0.97
TSPAN4-210ENST00000464987 PARP1P09874 1014 aaKnown RBP21.13■□□□□ 0.97
TSPAN4-210ENST00000464987 NAPAP54920 295 aa21.13■□□□□ 0.97
TSPAN4-210ENST00000464987 PICALMQ13492 652 aa21.13■□□□□ 0.97
TSPAN4-210ENST00000464987 ZMYND12Q9H0C1 365 aa21.13■□□□□ 0.97
TSPAN4-210ENST00000464987 DAGLAQ9Y4D2 1042 aa21.13■□□□□ 0.97
TSPAN4-210ENST00000464987 ADAMTSL1Q8N6G6 1762 aa21.13■□□□□ 0.97
TSPAN4-210ENST00000464987 PRCPP42785 496 aa21.13■□□□□ 0.97
TSPAN4-210ENST00000464987 ZNF658Q5TYW1 1059 aaPredicted RBP21.13■□□□□ 0.97
TSPAN4-210ENST00000464987 CLEC10AQ8IUN9 316 aa21.13■□□□□ 0.97
TSPAN4-210ENST00000464987 FAM163AQ96GL9 167 aaPredicted RBP21.13■□□□□ 0.97
TSPAN4-210ENST00000464987 PIGSQ96S52 555 aa21.13■□□□□ 0.97
TSPAN4-210ENST00000464987 SPZ1Q9BXG8 430 aa21.13■□□□□ 0.97
TSPAN4-210ENST00000464987 ZNF287Q9HBT7 754 aa21.13■□□□□ 0.97
TSPAN4-210ENST00000464987 LRRC37AA6NMS7 1700 aa21.13■□□□□ 0.97
TSPAN4-210ENST00000464987 PHLPP2Q6ZVD8 1323 aa21.12■□□□□ 0.97
TSPAN4-210ENST00000464987 USP17L5A8MUK1 530 aa21.12■□□□□ 0.97
TSPAN4-210ENST00000464987 AKR1B15C9JRZ8 316 aaPredicted RBP21.12■□□□□ 0.97
TSPAN4-210ENST00000464987 HOXA10P31260 410 aaPredicted RBP21.12■□□□□ 0.97
TSPAN4-210ENST00000464987 TXLNAP40222 546 aa21.12■□□□□ 0.97
TSPAN4-210ENST00000464987 KRT31Q15323 416 aa21.12■□□□□ 0.97
TSPAN4-210ENST00000464987 NELFBQ8WX92 580 aa21.12■□□□□ 0.97
TSPAN4-210ENST00000464987 MXD3Q9BW11 206 aa21.12■□□□□ 0.97
TSPAN4-210ENST00000464987 A0A0U1RQJ8 604 aa21.12■□□□□ 0.97
TSPAN4-210ENST00000464987 TRIM49BA6NDI0 452 aa21.12■□□□□ 0.97
TSPAN4-210ENST00000464987 SMCO2A6NFE2 343 aa21.12■□□□□ 0.97
TSPAN4-210ENST00000464987 ZSCAN12O43309 604 aa21.12■□□□□ 0.97
TSPAN4-210ENST00000464987 TRIM37O94972 964 aa21.12■□□□□ 0.97
TSPAN4-210ENST00000464987 PAK1Q13153 545 aa21.12■□□□□ 0.97
TSPAN4-210ENST00000464987 ERCC6LQ2NKX8 1250 aa21.12■□□□□ 0.97
TSPAN4-210ENST00000464987 KMT5BQ4FZB7 885 aa21.12■□□□□ 0.97
TSPAN4-210ENST00000464987 CREBRFQ8IUR6 639 aa21.12■□□□□ 0.97
TSPAN4-210ENST00000464987 ATRIPQ8WXE1 791 aa21.12■□□□□ 0.97
TSPAN4-210ENST00000464987 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.12■□□□□ 0.97
TSPAN4-210ENST00000464987 BRWD3Q6RI45 1802 aa21.11■□□□□ 0.97
TSPAN4-210ENST00000464987 FRMPD2Q68DX3 1309 aaPredicted RBP21.11■□□□□ 0.97
TSPAN4-210ENST00000464987 LETM2Q2VYF4 491 aa21.11■□□□□ 0.97
TSPAN4-210ENST00000464987 RASSF8Q8NHQ8 419 aa21.11■□□□□ 0.97
TSPAN4-210ENST00000464987 WDR24Q96S15 920 aa21.11■□□□□ 0.97
TSPAN4-210ENST00000464987 PYM1Q9BRP8 204 aaKnown RBP21.11■□□□□ 0.97
TSPAN4-210ENST00000464987 VPS16Q9H269 839 aa21.11■□□□□ 0.97
TSPAN4-210ENST00000464987 CGNQ9P2M7 1197 aaKnown RBP21.11■□□□□ 0.97
TSPAN4-210ENST00000464987 RWDD2AQ9UIY3 292 aa21.11■□□□□ 0.97
TSPAN4-210ENST00000464987 PLCG2P16885 1265 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms