RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 AMOTL1Q8IY63 956 aa8.19□□□□□ -1.1
USP48-206ENST00000464577 CCDC170Q8IYT3 715 aa8.19□□□□□ -1.1
USP48-206ENST00000464577 MMGT1Q8N4V1 131 aa8.19□□□□□ -1.1
USP48-206ENST00000464577 ZNF507Q8TCN5 953 aa8.19□□□□□ -1.1
USP48-206ENST00000464577 JAKMIP2Q96AA8 810 aa8.19□□□□□ -1.1
USP48-206ENST00000464577 FAM89AQ96GI7 184 aa8.19□□□□□ -1.1
USP48-206ENST00000464577 DEF6Q9H4E7 631 aa8.19□□□□□ -1.1
USP48-206ENST00000464577 CNNM1Q9NRU3 951 aa8.19□□□□□ -1.1
USP48-206ENST00000464577 RBM28Q9NW13 759 aaKnown RBP8.19□□□□□ -1.1
USP48-206ENST00000464577 GOLGA6AQ9NYA3 693 aa8.19□□□□□ -1.1
USP48-206ENST00000464577 HDAC6Q9UBN7 1215 aa8.19□□□□□ -1.1
USP48-206ENST00000464577 TRIM10Q9UDY6 481 aa8.19□□□□□ -1.1
USP48-206ENST00000464577 FAM184BQ9ULE4 1060 aa8.19□□□□□ -1.1
USP48-206ENST00000464577 SOS2Q07890 1332 aaPredicted RBP8.19□□□□□ -1.1
USP48-206ENST00000464577 MYH6P13533 1939 aa8.19□□□□□ -1.1
USP48-206ENST00000464577 GOLGA6BA6NDN3 693 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 RPN1P04843 607 aaKnown RBP8.18□□□□□ -1.1
USP48-206ENST00000464577 PARP1P09874 1014 aaKnown RBP8.18□□□□□ -1.1
USP48-206ENST00000464577 EPB41P11171 864 aaKnown RBP8.18□□□□□ -1.1
USP48-206ENST00000464577 FGFR2P21802 821 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 TDO2P48775 406 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 IRAK1P51617 712 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 CTSWP56202 376 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 FUT2Q10981 343 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 PUM3Q15397 648 aaKnown RBP8.18□□□□□ -1.1
USP48-206ENST00000464577 EARS2Q5JPH6 523 aaKnown RBP8.18□□□□□ -1.1
USP48-206ENST00000464577 WDR59Q6PJI9 974 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 MAGEB6Q8N7X4 407 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 SPATA5Q8NB90 893 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 RETREG2Q8NC44 543 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 NOC3LQ8WTT2 800 aaKnown RBP8.18□□□□□ -1.1
USP48-206ENST00000464577 NUP133Q8WUM0 1156 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 LPIN2Q92539 896 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 CCDC85AQ96PX6 553 aaPredicted RBP8.18□□□□□ -1.1
USP48-206ENST00000464577 CEP89Q96ST8 783 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 SH3GL2Q99962 352 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 NCAPGQ9BPX3 1015 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 UBAC1Q9BSL1 405 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 NUP58Q9BVL2 599 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 THAP9Q9H5L6 903 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 GREM2Q9H772 168 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 KAT14Q9H8E8 782 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 ARMT1Q9H993 441 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 ANAPC4Q9UJX5 808 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 MYH13Q9UKX3 1938 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 MYH3P11055 1940 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 EXOC5O00471 708 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 EBAG9O00559 213 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 ENC1O14682 589 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 EIF3HO15372 352 aaKnown RBP eCLIP8.18□□□□□ -1.1
USP48-206ENST00000464577 CLSTN1O94985 981 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 CDK17Q00537 523 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 RRP12Q5JTH9 1297 aaKnown RBP8.18□□□□□ -1.1
USP48-206ENST00000464577 KIAA1328Q86T90 577 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 IRF2BP1Q8IU81 584 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 ADSSL1Q8N142 457 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 CAGE1Q8TC20 777 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 ZKSCAN3Q9BRR0 538 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 TSGA10Q9BZW7 698 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 VPS54Q9P1Q0 977 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 MROH5Q6ZUA9 1318 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 MYH2Q9UKX2 1941 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 RREB1Q92766 1687 aa8.18□□□□□ -1.1
USP48-206ENST00000464577 ANKRD36CQ5JPF3 1778 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 DLEC1Q9Y238 1755 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 SHTN1A0MZ66 631 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 WNT7AO00755 349 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 OPA1O60313 960 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 ERLIN2O94905 339 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 IPO7O95373 1038 aaKnown RBP8.17□□□□□ -1.1
USP48-206ENST00000464577 CALM1P0DP23 149 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 CALM2P0DP24 149 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 CALM3P0DP25 149 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 SRGNP10124 158 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 MYBL2P10244 700 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 PRLRP16471 622 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 TNFRSF8P28908 595 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 DNM2P50570 870 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 SKOR1P84550 965 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 KCNB1Q14721 858 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 ZNF174Q15697 407 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 NPY5RQ15761 445 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 CMTR1Q8N1G2 835 aaKnown RBP8.17□□□□□ -1.1
USP48-206ENST00000464577 CCDC82Q8N4S0 544 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 IQCDQ96DY2 449 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 MYCBPQ99417 103 aaPredicted RBP8.17□□□□□ -1.1
USP48-206ENST00000464577 MTRQ99707 1265 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 CAPS2Q9BXY5 557 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 TTYH3Q9C0H2 523 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 BLZF1Q9H2G9 400 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 PLEKHA4Q9H4M7 779 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 GNL3LQ9NVN8 582 aaKnown RBP8.17□□□□□ -1.1
USP48-206ENST00000464577 SLC4A4Q9Y6R1 1079 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 FAM169AQ9Y6X4 670 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 GRIN2DO15399 1336 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 TNKSO95271 1327 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 DUOX1Q9NRD9 1551 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 PDE2AO00408 941 aaPredicted RBP8.17□□□□□ -1.1
USP48-206ENST00000464577 SRGAP2O75044 1071 aa8.17□□□□□ -1.1
USP48-206ENST00000464577 MYL1P05976 194 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms