RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 NEDD4P46934 1319 aa8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 EIF3CLB5ME19 914 aaKnown RBP8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 IGKV5-2P06315 115 aa8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 SNRPA1P09661 255 aaKnown RBP8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 ATP1A3P13637 1013 aa8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 KRT83P78385 493 aa8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 SSRP1Q08945 709 aaKnown RBP8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 MORC3Q14149 939 aa8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 NR1I3Q14994 352 aa8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 SART3Q15020 963 aaKnown RBP8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 ZNF569Q5MCW4 686 aa8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 PPP1R26Q5T8A7 1209 aaPredicted RBP8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 MCTP2Q6DN12 878 aa8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 TTLL5Q6EMB2 1281 aa8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 VPS37DQ86XT2 251 aa8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 NPAS3Q8IXF0 933 aa8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 MB21D2Q8IYB1 491 aaPredicted RBP8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 TTC5Q8N0Z6 440 aa8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 FAM177A1Q8N128 213 aaPredicted RBP8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 LINC00528Q8N1L1 170 aa8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 TMTC2Q8N394 836 aa8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 IGSF22Q8N9C0 903 aa8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 PLBD2Q8NHP8 589 aa8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 NEUROD6Q96NK8 337 aa8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 GSDMAQ96QA5 445 aa8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 WDR24Q96S15 920 aa8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 EIF3CQ99613 913 aaKnown RBP8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 MYD88Q99836 296 aa8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 NCAPGQ9BPX3 1015 aa8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 LRRC2Q9BYS8 371 aa8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 FTOQ9C0B1 505 aaKnown RBP eCLIP8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 HSD3B7Q9H2F3 369 aa8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 FOXP1Q9H334 677 aaPredicted RBP8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 HAUS4Q9H6D7 363 aa8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 CNNM2Q9H8M5 875 aa8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 LGR6Q9HBX8 967 aa8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 NCOA5Q9HCD5 579 aaKnown RBP8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 CDV3Q9UKY7 258 aaKnown RBP8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 PCDHA5Q9Y5H7 936 aa8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 TAF6LQ9Y6J9 622 aa8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 LAMB4A4D0S4 1761 aa8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 SCN11AQ9UI33 1791 aa8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 ARFGEF2Q9Y6D5 1785 aa8.1□□□□□ -1.11
CLSTN1-204ENST00000464286 SYNRGQ9UMZ2 1314 aa8.1□□□□□ -1.11
CLSTN1-204ENST00000464286 GOLGA8KD6RF30 607 aa8.1□□□□□ -1.11
CLSTN1-204ENST00000464286 EYA2O00167 538 aa8.1□□□□□ -1.11
CLSTN1-204ENST00000464286 ZBTB43O43298 467 aa8.1□□□□□ -1.11
CLSTN1-204ENST00000464286 MFAP3LO75121 409 aa8.1□□□□□ -1.11
CLSTN1-204ENST00000464286 ATP2B1P20020 1258 aa8.1□□□□□ -1.11
CLSTN1-204ENST00000464286 HOXA7P31268 230 aaPredicted RBP8.1□□□□□ -1.11
CLSTN1-204ENST00000464286 VEGFBP49765 207 aa8.1□□□□□ -1.11
CLSTN1-204ENST00000464286 PPFIA1Q13136 1202 aa8.1□□□□□ -1.11
CLSTN1-204ENST00000464286 PNOCQ13519 176 aa8.1□□□□□ -1.11
CLSTN1-204ENST00000464286 PTPAQ15257 358 aa8.1□□□□□ -1.11
CLSTN1-204ENST00000464286 KRT40Q6A162 431 aa8.1□□□□□ -1.11
CLSTN1-204ENST00000464286 SHC4Q6S5L8 630 aa8.1□□□□□ -1.11
CLSTN1-204ENST00000464286 MPRIPQ6WCQ1 1025 aa8.1□□□□□ -1.11
CLSTN1-204ENST00000464286 CCDC129Q6ZRS4 1044 aa8.1□□□□□ -1.11
CLSTN1-204ENST00000464286 TADA2BQ86TJ2 420 aa8.1□□□□□ -1.11
CLSTN1-204ENST00000464286 C14orf37Q86TY3 774 aa8.1□□□□□ -1.11
CLSTN1-204ENST00000464286 THEMISQ8N1K5 641 aaPredicted RBP8.1□□□□□ -1.11
CLSTN1-204ENST00000464286 LRRN4CLQ8ND94 238 aa8.1□□□□□ -1.11
CLSTN1-204ENST00000464286 FAM76AQ8TAV0 307 aa8.1□□□□□ -1.11
CLSTN1-204ENST00000464286 SLC16A10Q8TF71 515 aa8.1□□□□□ -1.11
CLSTN1-204ENST00000464286 FERMT2Q96AC1 680 aa8.1□□□□□ -1.11
CLSTN1-204ENST00000464286 TRERF1Q96PN7 1200 aa8.1□□□□□ -1.11
CLSTN1-204ENST00000464286 TSGA10Q9BZW7 698 aa8.1□□□□□ -1.11
CLSTN1-204ENST00000464286 CEP126Q9P2H0 1117 aa8.1□□□□□ -1.11
CLSTN1-204ENST00000464286 MAN1B1Q9UKM7 699 aa8.1□□□□□ -1.11
CLSTN1-204ENST00000464286 MYO6Q9UM54 1294 aa8.1□□□□□ -1.11
CLSTN1-204ENST00000464286 NID2Q14112 1375 aa8.1□□□□□ -1.11
CLSTN1-204ENST00000464286 A0A087WZG4 1122 aa8.09□□□□□ -1.11
CLSTN1-204ENST00000464286 ANO9A1A5B4 782 aa8.09□□□□□ -1.11
CLSTN1-204ENST00000464286 KIAA0754O94854 1291 aa8.09□□□□□ -1.11
CLSTN1-204ENST00000464286 ANXA1P04083 346 aa8.09□□□□□ -1.11
CLSTN1-204ENST00000464286 BMP2P12643 396 aa8.09□□□□□ -1.11
CLSTN1-204ENST00000464286 CALRP27797 417 aaKnown RBP8.09□□□□□ -1.11
CLSTN1-204ENST00000464286 PPP1R2P41236 205 aa8.09□□□□□ -1.11
CLSTN1-204ENST00000464286 ARHGAP25P42331 645 aa8.09□□□□□ -1.11
CLSTN1-204ENST00000464286 LIFRP42702 1097 aa8.09□□□□□ -1.11
CLSTN1-204ENST00000464286 SARSP49591 514 aaKnown RBP8.09□□□□□ -1.11
CLSTN1-204ENST00000464286 ITIH3Q06033 890 aa8.09□□□□□ -1.11
CLSTN1-204ENST00000464286 AIMP1Q12904 312 aaKnown RBP8.09□□□□□ -1.11
CLSTN1-204ENST00000464286 STIM1Q13586 685 aa8.09□□□□□ -1.11
CLSTN1-204ENST00000464286 INTS6LQ5JSJ4 861 aaKnown RBP8.09□□□□□ -1.11
CLSTN1-204ENST00000464286 NBPF6Q5VWK0 638 aa8.09□□□□□ -1.11
CLSTN1-204ENST00000464286 ZNF790Q6PG37 636 aa8.09□□□□□ -1.11
CLSTN1-204ENST00000464286 TOGARAM2Q6ZUX3 1019 aa8.09□□□□□ -1.11
CLSTN1-204ENST00000464286 Q6ZVU0 165 aa8.09□□□□□ -1.11
CLSTN1-204ENST00000464286 COPS6Q7L5N1 327 aa8.09□□□□□ -1.11
CLSTN1-204ENST00000464286 SGMS1Q86VZ5 419 aa8.09□□□□□ -1.11
CLSTN1-204ENST00000464286 METTL16Q86W50 562 aaKnown RBP8.09□□□□□ -1.11
CLSTN1-204ENST00000464286 NOSTRINQ8IVI9 506 aa8.09□□□□□ -1.11
CLSTN1-204ENST00000464286 AMOTL1Q8IY63 956 aa8.09□□□□□ -1.11
CLSTN1-204ENST00000464286 PNMA1Q8ND90 353 aa8.09□□□□□ -1.11
CLSTN1-204ENST00000464286 XAGE3Q8WTP9 111 aa8.09□□□□□ -1.11
CLSTN1-204ENST00000464286 NOC3LQ8WTT2 800 aaKnown RBP8.09□□□□□ -1.11
CLSTN1-204ENST00000464286 DPF2Q92785 391 aa8.09□□□□□ -1.11
CLSTN1-204ENST00000464286 NBPF4Q96M43 638 aa8.09□□□□□ -1.11
CLSTN1-204ENST00000464286 RUFY1Q96T51 708 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms