RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 PLEKHH3Q7Z736 793 aa18.06■□□□□ 0.48
RAB11FIP3-208ENST00000464263 SHCBP1Q8NEM2 672 aa18.06■□□□□ 0.48
RAB11FIP3-208ENST00000464263 NEK1Q96PY6 1258 aa18.06■□□□□ 0.48
RAB11FIP3-208ENST00000464263 MTA3Q9BTC8 594 aa18.06■□□□□ 0.48
RAB11FIP3-208ENST00000464263 GPCPD1Q9NPB8 672 aa18.06■□□□□ 0.48
RAB11FIP3-208ENST00000464263 PRR12Q9ULL5 1215 aa18.06■□□□□ 0.48
RAB11FIP3-208ENST00000464263 FRMPD2Q68DX3 1309 aaPredicted RBP18.05■□□□□ 0.48
RAB11FIP3-208ENST00000464263 SMCHD1A6NHR9 2005 aa18.05■□□□□ 0.48
RAB11FIP3-208ENST00000464263 ERICH2A1L162 156 aa18.05■□□□□ 0.48
RAB11FIP3-208ENST00000464263 ATP2A1O14983 1001 aa18.05■□□□□ 0.48
RAB11FIP3-208ENST00000464263 PRC1O43663 620 aa18.05■□□□□ 0.48
RAB11FIP3-208ENST00000464263 ZBED4O75132 1171 aa18.05■□□□□ 0.48
RAB11FIP3-208ENST00000464263 ZKSCAN1P17029 563 aaPredicted RBP18.05■□□□□ 0.48
RAB11FIP3-208ENST00000464263 ERCC3P19447 782 aa18.05■□□□□ 0.48
RAB11FIP3-208ENST00000464263 STAT3P40763 770 aa18.05■□□□□ 0.48
RAB11FIP3-208ENST00000464263 IRF5Q13568 498 aa18.05■□□□□ 0.48
RAB11FIP3-208ENST00000464263 CCDC96Q2M329 555 aa18.05■□□□□ 0.48
RAB11FIP3-208ENST00000464263 TMEM67Q5HYA8 995 aa18.05■□□□□ 0.48
RAB11FIP3-208ENST00000464263 MORN1Q5T089 497 aa18.05■□□□□ 0.48
RAB11FIP3-208ENST00000464263 RIOX2Q8IUF8 465 aa18.05■□□□□ 0.48
RAB11FIP3-208ENST00000464263 CCAR1Q8IX12 1150 aaKnown RBP18.05■□□□□ 0.48
RAB11FIP3-208ENST00000464263 USP6NLQ92738 828 aa18.05■□□□□ 0.48
RAB11FIP3-208ENST00000464263 ISY1Q9ULR0 285 aaKnown RBP18.05■□□□□ 0.48
RAB11FIP3-208ENST00000464263 SLC25A27O95847 323 aa18.04■□□□□ 0.48
RAB11FIP3-208ENST00000464263 PTPREP23469 700 aa18.04■□□□□ 0.48
RAB11FIP3-208ENST00000464263 SLC16A2P36021 539 aa18.04■□□□□ 0.48
RAB11FIP3-208ENST00000464263 EXOSC10Q01780 885 aaKnown RBP18.04■□□□□ 0.48
RAB11FIP3-208ENST00000464263 IKQ13123 557 aaPredicted RBP18.04■□□□□ 0.48
RAB11FIP3-208ENST00000464263 KRT32Q14532 448 aa18.04■□□□□ 0.48
RAB11FIP3-208ENST00000464263 WTAPQ15007 396 aa18.04■□□□□ 0.48
RAB11FIP3-208ENST00000464263 SART3Q15020 963 aaKnown RBP18.04■□□□□ 0.48
RAB11FIP3-208ENST00000464263 GPATCH4Q5T3I0 446 aaKnown RBP18.04■□□□□ 0.48
RAB11FIP3-208ENST00000464263 RAET1EQ8TD07 263 aa18.04■□□□□ 0.48
RAB11FIP3-208ENST00000464263 TMEM87BQ96K49 555 aa18.04■□□□□ 0.48
RAB11FIP3-208ENST00000464263 MROH8Q9H579 483 aa18.04■□□□□ 0.48
RAB11FIP3-208ENST00000464263 LY9Q9HBG7 655 aa18.04■□□□□ 0.48
RAB11FIP3-208ENST00000464263 GPHNQ9NQX3 736 aaPredicted RBP18.04■□□□□ 0.48
RAB11FIP3-208ENST00000464263 SNX14Q9Y5W7 946 aa18.04■□□□□ 0.48
RAB11FIP3-208ENST00000464263 GOLGA8HP0CJ92 632 aa18.03■□□□□ 0.48
RAB11FIP3-208ENST00000464263 OAZ1P54368 228 aa18.03■□□□□ 0.48
RAB11FIP3-208ENST00000464263 SYDE2Q5VT97 1194 aa18.03■□□□□ 0.48
RAB11FIP3-208ENST00000464263 NCAPG2Q86XI2 1143 aa18.03■□□□□ 0.48
RAB11FIP3-208ENST00000464263 NUDT12Q9BQG2 462 aa18.03■□□□□ 0.48
RAB11FIP3-208ENST00000464263 TEX13BQ9BXU2 312 aa18.03■□□□□ 0.48
RAB11FIP3-208ENST00000464263 RAVER2Q9HCJ3 691 aaKnown RBP18.03■□□□□ 0.48
RAB11FIP3-208ENST00000464263 RIPK3Q9Y572 518 aa18.03■□□□□ 0.48
RAB11FIP3-208ENST00000464263 CENPFP49454 3210 aa18.03■□□□□ 0.48
RAB11FIP3-208ENST00000464263 ZNF536O15090 1300 aa18.02■□□□□ 0.48
RAB11FIP3-208ENST00000464263 SLC15A5A6NIM6 579 aa18.02■□□□□ 0.48
RAB11FIP3-208ENST00000464263 SH2B2O14492 632 aaPredicted RBP18.02■□□□□ 0.48
RAB11FIP3-208ENST00000464263 STRNO43815 780 aa18.02■□□□□ 0.48
RAB11FIP3-208ENST00000464263 SNAP25P60880 206 aa18.02■□□□□ 0.48
RAB11FIP3-208ENST00000464263 WDR78Q5VTH9 848 aa18.02■□□□□ 0.48
RAB11FIP3-208ENST00000464263 DHX32Q7L7V1 743 aaKnown RBP18.02■□□□□ 0.48
RAB11FIP3-208ENST00000464263 CPXCR1Q8N123 301 aa18.02■□□□□ 0.48
RAB11FIP3-208ENST00000464263 TMTC2Q8N394 836 aa18.02■□□□□ 0.48
RAB11FIP3-208ENST00000464263 PXYLP1Q8TE99 480 aa18.02■□□□□ 0.48
RAB11FIP3-208ENST00000464263 ARMC5Q96C12 935 aa18.02■□□□□ 0.48
RAB11FIP3-208ENST00000464263 RANBP17Q9H2T7 1088 aaKnown RBP18.02■□□□□ 0.48
RAB11FIP3-208ENST00000464263 GTF3C3Q9Y5Q9 886 aa18.02■□□□□ 0.48
RAB11FIP3-208ENST00000464263 WDR19Q8NEZ3 1342 aa18.01■□□□□ 0.47
RAB11FIP3-208ENST00000464263 ADCY3O60266 1144 aa18.01■□□□□ 0.47
RAB11FIP3-208ENST00000464263 GRK4P32298 578 aa18.01■□□□□ 0.47
RAB11FIP3-208ENST00000464263 LIFRP42702 1097 aa18.01■□□□□ 0.47
RAB11FIP3-208ENST00000464263 TROAPQ12815 778 aa18.01■□□□□ 0.47
RAB11FIP3-208ENST00000464263 GRB14Q14449 540 aa18.01■□□□□ 0.47
RAB11FIP3-208ENST00000464263 SLC9C1Q4G0N8 1177 aa18.01■□□□□ 0.47
RAB11FIP3-208ENST00000464263 ASPRV1Q53RT3 343 aa18.01■□□□□ 0.47
RAB11FIP3-208ENST00000464263 SNRNP48Q6IEG0 339 aaKnown RBP18.01■□□□□ 0.47
RAB11FIP3-208ENST00000464263 STAG2Q8N3U4 1231 aa18.01■□□□□ 0.47
RAB11FIP3-208ENST00000464263 SH3TC2Q8TF17 1288 aa18.01■□□□□ 0.47
RAB11FIP3-208ENST00000464263 SOCS4Q8WXH5 440 aa18.01■□□□□ 0.47
RAB11FIP3-208ENST00000464263 UBA5Q9GZZ9 404 aa18.01■□□□□ 0.47
RAB11FIP3-208ENST00000464263 CWC22Q9HCG8 908 aaKnown RBP18.01■□□□□ 0.47
RAB11FIP3-208ENST00000464263 CTDP1Q9Y5B0 961 aaPredicted RBP18.01■□□□□ 0.47
RAB11FIP3-208ENST00000464263 IVNS1ABPQ9Y6Y0 642 aa18.01■□□□□ 0.47
RAB11FIP3-208ENST00000464263 ZNF236Q9UL36 1845 aa18■□□□□ 0.47
RAB11FIP3-208ENST00000464263 PALM3A6NDB9 673 aaPredicted RBP18■□□□□ 0.47
RAB11FIP3-208ENST00000464263 HMGB1P09429 215 aaKnown RBP18■□□□□ 0.47
RAB11FIP3-208ENST00000464263 PARP1P09874 1014 aaKnown RBP18■□□□□ 0.47
RAB11FIP3-208ENST00000464263 XRCC5P13010 732 aaKnown RBP18■□□□□ 0.47
RAB11FIP3-208ENST00000464263 CYP2B6P20813 491 aa18■□□□□ 0.47
RAB11FIP3-208ENST00000464263 COPB2P35606 906 aa18■□□□□ 0.47
RAB11FIP3-208ENST00000464263 MAP2K5Q13163 448 aa18■□□□□ 0.47
RAB11FIP3-208ENST00000464263 NBPF11Q86T75 865 aa18■□□□□ 0.47
RAB11FIP3-208ENST00000464263 ABRAQ8N0Z2 381 aa18■□□□□ 0.47
RAB11FIP3-208ENST00000464263 SLAIN1Q8ND83 568 aa18■□□□□ 0.47
RAB11FIP3-208ENST00000464263 AGBL1Q96MI9 1066 aa18■□□□□ 0.47
RAB11FIP3-208ENST00000464263 LRRC2Q9BYS8 371 aa18■□□□□ 0.47
RAB11FIP3-208ENST00000464263 CPVLQ9H3G5 476 aa18■□□□□ 0.47
RAB11FIP3-208ENST00000464263 MAD2L2Q9UI95 211 aa18■□□□□ 0.47
RAB11FIP3-208ENST00000464263 MYH6P13533 1939 aa18■□□□□ 0.47
RAB11FIP3-208ENST00000464263 SEC24BO95487 1268 aa17.99■□□□□ 0.47
RAB11FIP3-208ENST00000464263 ELNP15502 786 aa17.99■□□□□ 0.47
RAB11FIP3-208ENST00000464263 RGS2P41220 211 aa17.99■□□□□ 0.47
RAB11FIP3-208ENST00000464263 GRM4Q14833 912 aa17.99■□□□□ 0.47
RAB11FIP3-208ENST00000464263 CCDC174Q6PII3 467 aa17.99■□□□□ 0.47
RAB11FIP3-208ENST00000464263 CATIPQ7Z7H3 387 aa17.99■□□□□ 0.47
RAB11FIP3-208ENST00000464263 SGMS1Q86VZ5 419 aa17.99■□□□□ 0.47
RAB11FIP3-208ENST00000464263 ZNF333Q96JL9 665 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms