RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 DLG4P78352 724 aa7.22□□□□□ -1.25
ITGB1-208ENST00000464001 AUHQ13825 339 aaKnown RBP7.22□□□□□ -1.25
ITGB1-208ENST00000464001 LCNL1Q6ZST4 164 aa7.22□□□□□ -1.25
ITGB1-208ENST00000464001 SIRT2Q8IXJ6 389 aa7.22□□□□□ -1.25
ITGB1-208ENST00000464001 CRTAC1Q9NQ79 661 aa7.22□□□□□ -1.25
ITGB1-208ENST00000464001 GFOD1Q9NXC2 390 aa7.22□□□□□ -1.25
ITGB1-208ENST00000464001 PRR13Q9NZ81 148 aa7.22□□□□□ -1.25
ITGB1-208ENST00000464001 TNFRSF10DQ9UBN6 386 aa7.22□□□□□ -1.25
ITGB1-208ENST00000464001 ZNRF3Q9ULT6 936 aa7.22□□□□□ -1.25
ITGB1-208ENST00000464001 TEX51A0A1B0GUA7 166 aa7.21□□□□□ -1.26
ITGB1-208ENST00000464001 MYOCOSA0A1B0GUC4 107 aa7.21□□□□□ -1.26
ITGB1-208ENST00000464001 GALK1P51570 392 aa7.21□□□□□ -1.26
ITGB1-208ENST00000464001 LINC00310P59036 64 aa7.21□□□□□ -1.26
ITGB1-208ENST00000464001 ADGRF1Q5T601 910 aa7.21□□□□□ -1.26
ITGB1-208ENST00000464001 AMIGO3Q86WK7 504 aa7.21□□□□□ -1.26
ITGB1-208ENST00000464001 HHIPL1Q96JK4 782 aa7.21□□□□□ -1.26
ITGB1-208ENST00000464001 FCRL2Q96LA5 508 aaPredicted RBP7.21□□□□□ -1.26
ITGB1-208ENST00000464001 SUCOQ9UBS9 1254 aaKnown RBP7.21□□□□□ -1.26
ITGB1-208ENST00000464001 MEIS1O00470 390 aa7.2□□□□□ -1.26
ITGB1-208ENST00000464001 BMP8BP34820 402 aa7.2□□□□□ -1.26
ITGB1-208ENST00000464001 RTP1P59025 263 aa7.2□□□□□ -1.26
ITGB1-208ENST00000464001 FANCCQ00597 558 aa7.2□□□□□ -1.26
ITGB1-208ENST00000464001 ZPBP2Q6X784 338 aa7.2□□□□□ -1.26
ITGB1-208ENST00000464001 CCDC144CPQ8IYA2 1237 aa7.2□□□□□ -1.26
ITGB1-208ENST00000464001 RNF34Q969K3 372 aa7.2□□□□□ -1.26
ITGB1-208ENST00000464001 FERD3LQ96RJ6 166 aa7.2□□□□□ -1.26
ITGB1-208ENST00000464001 MINPP1Q9UNW1 487 aa7.2□□□□□ -1.26
ITGB1-208ENST00000464001 NUAK1O60285 661 aa7.19□□□□□ -1.26
ITGB1-208ENST00000464001 PNLIPP16233 465 aa7.19□□□□□ -1.26
ITGB1-208ENST00000464001 MFAP1P55081 439 aaKnown RBP7.19□□□□□ -1.26
ITGB1-208ENST00000464001 ZNF394Q53GI3 561 aa7.19□□□□□ -1.26
ITGB1-208ENST00000464001 GALNT18Q6P9A2 607 aa7.19□□□□□ -1.26
ITGB1-208ENST00000464001 C7orf61Q8IZ16 206 aa7.19□□□□□ -1.26
ITGB1-208ENST00000464001 TAB3Q8N5C8 712 aaPredicted RBP7.19□□□□□ -1.26
ITGB1-208ENST00000464001 SMARCC1Q92922 1105 aaPredicted RBP7.19□□□□□ -1.26
ITGB1-208ENST00000464001 TM9SF2Q99805 663 aa7.19□□□□□ -1.26
ITGB1-208ENST00000464001 FAM86C2PA6NEL3 165 aa7.18□□□□□ -1.26
ITGB1-208ENST00000464001 WTIPA6NIX2 430 aaPredicted RBP7.18□□□□□ -1.26
ITGB1-208ENST00000464001 FADS2P1A8MWK0 482 aa7.18□□□□□ -1.26
ITGB1-208ENST00000464001 HRKO00198 91 aa7.18□□□□□ -1.26
ITGB1-208ENST00000464001 ZNF205O95201 554 aa7.18□□□□□ -1.26
ITGB1-208ENST00000464001 GSNP06396 782 aa7.18□□□□□ -1.26
ITGB1-208ENST00000464001 ACRP10323 421 aa7.18□□□□□ -1.26
ITGB1-208ENST00000464001 VAV1P15498 845 aa7.18□□□□□ -1.26
ITGB1-208ENST00000464001 FBXW10Q5XX13 1052 aa7.18□□□□□ -1.26
ITGB1-208ENST00000464001 DSCC1Q9BVC3 393 aa7.18□□□□□ -1.26
ITGB1-208ENST00000464001 CDADC1Q9BWV3 514 aa7.18□□□□□ -1.26
ITGB1-208ENST00000464001 PCDHGB7Q9Y5F8 929 aa7.18□□□□□ -1.26
ITGB1-208ENST00000464001 ARL4AP40617 200 aa7.17□□□□□ -1.26
ITGB1-208ENST00000464001 PMS1P54277 932 aaKnown RBP7.17□□□□□ -1.26
ITGB1-208ENST00000464001 SRSF3P84103 164 aaKnown RBP7.17□□□□□ -1.26
ITGB1-208ENST00000464001 OLFML2BQ68BL8 750 aa7.17□□□□□ -1.26
ITGB1-208ENST00000464001 IRF2BPLQ9H1B7 796 aa7.17□□□□□ -1.26
ITGB1-208ENST00000464001 SIRT5Q9NXA8 310 aa7.17□□□□□ -1.26
ITGB1-208ENST00000464001 CNOT6Q9ULM6 557 aaKnown RBP7.17□□□□□ -1.26
ITGB1-208ENST00000464001 TAF6LQ9Y6J9 622 aa7.17□□□□□ -1.26
ITGB1-208ENST00000464001 A0A1W2PQ45 241 aaPredicted RBP7.16□□□□□ -1.26
ITGB1-208ENST00000464001 A0A1W2PQY0 241 aa7.16□□□□□ -1.26
ITGB1-208ENST00000464001 C9IYK1 514 aa7.16□□□□□ -1.26
ITGB1-208ENST00000464001 ABLIM1O14639 778 aa7.16□□□□□ -1.26
ITGB1-208ENST00000464001 EFEMP2O95967 443 aa7.16□□□□□ -1.26
ITGB1-208ENST00000464001 CTSKP43235 329 aa7.16□□□□□ -1.26
ITGB1-208ENST00000464001 LAPTM5Q13571 262 aa7.16□□□□□ -1.26
ITGB1-208ENST00000464001 HSF5Q4G112 596 aaPredicted RBP7.16□□□□□ -1.26
ITGB1-208ENST00000464001 ANKRD39Q53RE8 183 aa7.16□□□□□ -1.26
ITGB1-208ENST00000464001 ZNF385BQ569K4 471 aa7.16□□□□□ -1.26
ITGB1-208ENST00000464001 CWF19L1Q69YN2 538 aaKnown RBP7.16□□□□□ -1.26
ITGB1-208ENST00000464001 RBBP8NLQ8NC74 664 aaPredicted RBP7.16□□□□□ -1.26
ITGB1-208ENST00000464001 PLCD4Q9BRC7 762 aa7.16□□□□□ -1.26
ITGB1-208ENST00000464001 SGPP1Q9BX95 441 aa7.16□□□□□ -1.26
ITGB1-208ENST00000464001 GCM1Q9NP62 436 aa7.16□□□□□ -1.26
ITGB1-208ENST00000464001 ERVK13-1Q9NX77 482 aa7.16□□□□□ -1.26
ITGB1-208ENST00000464001 DDX41Q9UJV9 622 aaKnown RBP7.16□□□□□ -1.26
ITGB1-208ENST00000464001 GPR55Q9Y2T6 319 aaPredicted RBP7.16□□□□□ -1.26
ITGB1-208ENST00000464001 SCAMP3O14828 347 aaKnown RBP7.15□□□□□ -1.26
ITGB1-208ENST00000464001 MPOP05164 745 aa7.15□□□□□ -1.26
ITGB1-208ENST00000464001 ERVFRD-1P60508 538 aa7.15□□□□□ -1.26
ITGB1-208ENST00000464001 COL9A2Q14055 689 aaPredicted RBP7.15□□□□□ -1.26
ITGB1-208ENST00000464001 NOL9Q5SY16 702 aaKnown RBP7.15□□□□□ -1.26
ITGB1-208ENST00000464001 CRTC3Q6UUV7 619 aa7.15□□□□□ -1.26
ITGB1-208ENST00000464001 AP5S1Q9NUS5 200 aa7.15□□□□□ -1.26
ITGB1-208ENST00000464001 RFXAPO00287 272 aa7.14□□□□□ -1.27
ITGB1-208ENST00000464001 VAMP1P23763 118 aa7.14□□□□□ -1.27
ITGB1-208ENST00000464001 GUCY2CP25092 1073 aa7.14□□□□□ -1.27
ITGB1-208ENST00000464001 RACK1P63244 317 aaKnown RBP7.14□□□□□ -1.27
ITGB1-208ENST00000464001 UNC5AQ6ZN44 842 aa7.14□□□□□ -1.27
ITGB1-208ENST00000464001 SLCO6A1Q86UG4 719 aa7.14□□□□□ -1.27
ITGB1-208ENST00000464001 ZNF654Q8IZM8 581 aa7.14□□□□□ -1.27
ITGB1-208ENST00000464001 SPATA32Q96LK8 384 aa7.14□□□□□ -1.27
ITGB1-208ENST00000464001 CRBNQ96SW2 442 aa7.14□□□□□ -1.27
ITGB1-208ENST00000464001 KCTD3Q9Y597 815 aa7.14□□□□□ -1.27
ITGB1-208ENST00000464001 SHOXO15266 292 aa7.13□□□□□ -1.27
ITGB1-208ENST00000464001 GSTM1P09488 218 aa7.13□□□□□ -1.27
ITGB1-208ENST00000464001 NOP2P46087 812 aaKnown RBP7.13□□□□□ -1.27
ITGB1-208ENST00000464001 YBX1P67809 324 aaKnown RBP7.13□□□□□ -1.27
ITGB1-208ENST00000464001 CYP4F8P98187 520 aa7.13□□□□□ -1.27
ITGB1-208ENST00000464001 TMEM62Q0P6H9 643 aa7.13□□□□□ -1.27
ITGB1-208ENST00000464001 LCE4AQ5TA78 99 aa7.13□□□□□ -1.27
ITGB1-208ENST00000464001 TDRD10Q5VZ19 366 aaKnown RBP7.13□□□□□ -1.27
ITGB1-208ENST00000464001 TMEM151BQ8IW70 566 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms