RNA–Protein interactions for RNA: ENST00000463744.1

PCGF1-202, Transcript of polycomb group ring finger 1, humanhuman

TSL 1 (best)

Gene PCGF1, Length 227 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1-202ENST00000463744 ZKSCAN4Q969J2 545 aaPredicted RBP6.9□□□□□ -1.3
PCGF1-202ENST00000463744 SHISA4Q96DD7 197 aa6.9□□□□□ -1.3
PCGF1-202ENST00000463744 CDCA5Q96FF9 252 aa6.9□□□□□ -1.3
PCGF1-202ENST00000463744 PIGSQ96S52 555 aa6.9□□□□□ -1.3
PCGF1-202ENST00000463744 FEZ1Q99689 392 aa6.9□□□□□ -1.3
PCGF1-202ENST00000463744 ZMYND12Q9H0C1 365 aa6.9□□□□□ -1.3
PCGF1-202ENST00000463744 CPVLQ9H3G5 476 aa6.9□□□□□ -1.3
PCGF1-202ENST00000463744 JMJD4Q9H9V9 463 aa6.9□□□□□ -1.3
PCGF1-202ENST00000463744 VAT1LQ9HCJ6 419 aa6.9□□□□□ -1.3
PCGF1-202ENST00000463744 LMBRD1Q9NUN5 540 aa6.9□□□□□ -1.3
PCGF1-202ENST00000463744 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.9□□□□□ -1.3
PCGF1-202ENST00000463744 FEM1BQ9UK73 627 aa6.9□□□□□ -1.3
PCGF1-202ENST00000463744 ISY1Q9ULR0 285 aaKnown RBP6.9□□□□□ -1.3
PCGF1-202ENST00000463744 CNPY2Q9Y2B0 182 aa6.9□□□□□ -1.3
PCGF1-202ENST00000463744 ESYT2A0FGR8 921 aa6.89□□□□□ -1.31
PCGF1-202ENST00000463744 PRPF40AO75400 957 aaKnown RBP6.89□□□□□ -1.31
PCGF1-202ENST00000463744 YEATS4O95619 227 aa6.89□□□□□ -1.31
PCGF1-202ENST00000463744 SLC16A2P36021 539 aa6.89□□□□□ -1.31
PCGF1-202ENST00000463744 NAPAP54920 295 aa6.89□□□□□ -1.31
PCGF1-202ENST00000463744 BACE1P56817 501 aa6.89□□□□□ -1.31
PCGF1-202ENST00000463744 IKQ13123 557 aaPredicted RBP6.89□□□□□ -1.31
PCGF1-202ENST00000463744 VGLL4Q14135 290 aa6.89□□□□□ -1.31
PCGF1-202ENST00000463744 NPY5RQ15761 445 aa6.89□□□□□ -1.31
PCGF1-202ENST00000463744 RILPL1Q5EBL4 403 aa6.89□□□□□ -1.31
PCGF1-202ENST00000463744 KIAA1755Q5JYT7 1200 aa6.89□□□□□ -1.31
PCGF1-202ENST00000463744 FAM83BQ5T0W9 1011 aa6.89□□□□□ -1.31
PCGF1-202ENST00000463744 FAM173BQ6P4H8 233 aa6.89□□□□□ -1.31
PCGF1-202ENST00000463744 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.89□□□□□ -1.31
PCGF1-202ENST00000463744 ARMC9Q7Z3E5 817 aa6.89□□□□□ -1.31
PCGF1-202ENST00000463744 LDHDQ86WU2 507 aa6.89□□□□□ -1.31
PCGF1-202ENST00000463744 HOMER1Q86YM7 354 aa6.89□□□□□ -1.31
PCGF1-202ENST00000463744 ANKRD13AQ8IZ07 590 aa6.89□□□□□ -1.31
PCGF1-202ENST00000463744 BLIDQ8IZY5 108 aa6.89□□□□□ -1.31
PCGF1-202ENST00000463744 SPICE1Q8N0Z3 855 aa6.89□□□□□ -1.31
PCGF1-202ENST00000463744 RBM46Q8TBY0 533 aaKnown RBP6.89□□□□□ -1.31
PCGF1-202ENST00000463744 BICD2Q8TD16 824 aa6.89□□□□□ -1.31
PCGF1-202ENST00000463744 GPKOWQ92917 476 aaPredicted RBP eCLIP6.89□□□□□ -1.31
PCGF1-202ENST00000463744 TNFRSF25Q93038 417 aa6.89□□□□□ -1.31
PCGF1-202ENST00000463744 CHAMP1Q96JM3 812 aa6.89□□□□□ -1.31
PCGF1-202ENST00000463744 C12orf42Q96LP6 360 aa6.89□□□□□ -1.31
PCGF1-202ENST00000463744 NUP88Q99567 741 aaPredicted RBP6.89□□□□□ -1.31
PCGF1-202ENST00000463744 GLIS2Q9BZE0 524 aaPredicted RBP6.89□□□□□ -1.31
PCGF1-202ENST00000463744 GLT8D2Q9H1C3 349 aa6.89□□□□□ -1.31
PCGF1-202ENST00000463744 RRAGCQ9HB90 399 aa6.89□□□□□ -1.31
PCGF1-202ENST00000463744 C6orf50Q9HD87 102 aa6.89□□□□□ -1.31
PCGF1-202ENST00000463744 POLR3EQ9NVU0 708 aa6.89□□□□□ -1.31
PCGF1-202ENST00000463744 RTEL1Q9NZ71 1219 aa6.89□□□□□ -1.31
PCGF1-202ENST00000463744 TFIP11Q9UBB9 837 aaKnown RBP6.89□□□□□ -1.31
PCGF1-202ENST00000463744 PCDHA4Q9UN74 947 aa6.89□□□□□ -1.31
PCGF1-202ENST00000463744 CLEC11AQ9Y240 323 aa6.89□□□□□ -1.31
PCGF1-202ENST00000463744 AFG3L2Q9Y4W6 797 aa6.89□□□□□ -1.31
PCGF1-202ENST00000463744 CSADQ9Y600 493 aa6.89□□□□□ -1.31
PCGF1-202ENST00000463744 SNCAIPQ9Y6H5 919 aa6.89□□□□□ -1.31
PCGF1-202ENST00000463744 ZHX2Q9Y6X8 837 aa6.89□□□□□ -1.31
PCGF1-202ENST00000463744 ELP1O95163 1332 aa6.89□□□□□ -1.31
PCGF1-202ENST00000463744 SCN4AP35499 1836 aa6.89□□□□□ -1.31
PCGF1-202ENST00000463744 SMCO2A6NFE2 343 aa6.88□□□□□ -1.31
PCGF1-202ENST00000463744 M0R2N6 131 aa6.88□□□□□ -1.31
PCGF1-202ENST00000463744 FIBPO43427 364 aa6.88□□□□□ -1.31
PCGF1-202ENST00000463744 TRAK2O60296 914 aa6.88□□□□□ -1.31
PCGF1-202ENST00000463744 MBD3O95983 291 aa6.88□□□□□ -1.31
PCGF1-202ENST00000463744 FDX1P10109 184 aa6.88□□□□□ -1.31
PCGF1-202ENST00000463744 NASPP49321 788 aaPredicted RBP6.88□□□□□ -1.31
PCGF1-202ENST00000463744 UBE2HP62256 183 aa6.88□□□□□ -1.31
PCGF1-202ENST00000463744 FKBP1BP68106 108 aa6.88□□□□□ -1.31
PCGF1-202ENST00000463744 PPATQ06203 517 aa6.88□□□□□ -1.31
PCGF1-202ENST00000463744 SPP2Q13103 211 aa6.88□□□□□ -1.31
PCGF1-202ENST00000463744 NR5A1Q13285 461 aa6.88□□□□□ -1.31
PCGF1-202ENST00000463744 MTMR2Q13614 643 aa6.88□□□□□ -1.31
PCGF1-202ENST00000463744 PRKG1Q13976 671 aa6.88□□□□□ -1.31
PCGF1-202ENST00000463744 ZYXQ15942 572 aaKnown RBP6.88□□□□□ -1.31
PCGF1-202ENST00000463744 CDC37Q16543 378 aaPredicted RBP6.88□□□□□ -1.31
PCGF1-202ENST00000463744 QRICH1Q2TAL8 776 aa6.88□□□□□ -1.31
PCGF1-202ENST00000463744 SH3D19Q5HYK7 790 aa6.88□□□□□ -1.31
PCGF1-202ENST00000463744 TYW1BQ6NUM6 668 aa6.88□□□□□ -1.31
PCGF1-202ENST00000463744 DLK2Q6UY11 383 aa6.88□□□□□ -1.31
PCGF1-202ENST00000463744 CCDC84Q86UT8 332 aaPredicted RBP6.88□□□□□ -1.31
PCGF1-202ENST00000463744 TEX2Q8IWB9 1127 aa6.88□□□□□ -1.31
PCGF1-202ENST00000463744 LINC00301Q8NCQ3 95 aa6.88□□□□□ -1.31
PCGF1-202ENST00000463744 OXER1Q8TDS5 423 aa6.88□□□□□ -1.31
PCGF1-202ENST00000463744 LEO1Q8WVC0 666 aaPredicted RBP6.88□□□□□ -1.31
PCGF1-202ENST00000463744 SPATA32Q96LK8 384 aa6.88□□□□□ -1.31
PCGF1-202ENST00000463744 USP28Q96RU2 1077 aa6.88□□□□□ -1.31
PCGF1-202ENST00000463744 AMNQ9BXJ7 453 aa6.88□□□□□ -1.31
PCGF1-202ENST00000463744 RANBP17Q9H2T7 1088 aaKnown RBP6.88□□□□□ -1.31
PCGF1-202ENST00000463744 GDPD2Q9HCC8 539 aa6.88□□□□□ -1.31
PCGF1-202ENST00000463744 EMILIN3Q9NT22 766 aa6.88□□□□□ -1.31
PCGF1-202ENST00000463744 RCOR1Q9UKL0 485 aa6.88□□□□□ -1.31
PCGF1-202ENST00000463744 PRR12Q9ULL5 1215 aa6.88□□□□□ -1.31
PCGF1-202ENST00000463744 NOL7Q9UMY1 257 aaKnown RBP6.88□□□□□ -1.31
PCGF1-202ENST00000463744 FZD1Q9UP38 647 aa6.88□□□□□ -1.31
PCGF1-202ENST00000463744 MORC2Q9Y6X9 1032 aaPredicted RBP6.88□□□□□ -1.31
PCGF1-202ENST00000463744 CXCL11O14625 94 aa6.87□□□□□ -1.31
PCGF1-202ENST00000463744 PPP1R11O60927 126 aaPredicted RBP6.87□□□□□ -1.31
PCGF1-202ENST00000463744 BMP15O95972 392 aa6.87□□□□□ -1.31
PCGF1-202ENST00000463744 POTEIP0CG38 1075 aa6.87□□□□□ -1.31
PCGF1-202ENST00000463744 POTEJP0CG39 1038 aa6.87□□□□□ -1.31
PCGF1-202ENST00000463744 VCAM1P19320 739 aa6.87□□□□□ -1.31
PCGF1-202ENST00000463744 TRAPPC10P48553 1259 aa6.87□□□□□ -1.31
PCGF1-202ENST00000463744 ADCY7P51828 1080 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms