RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 HNRNPUQ00839 825 aaKnown RBP eCLIP18.88■□□□□ 0.61
SND1-203ENST00000463020 FPGSQ05932 587 aa18.88■□□□□ 0.61
SND1-203ENST00000463020 ANKRD33Q7Z3H0 272 aa18.88■□□□□ 0.61
SND1-203ENST00000463020 KLHDC9Q8NEP7 349 aa18.88■□□□□ 0.61
SND1-203ENST00000463020 CCDC17Q96LX7 622 aa18.88■□□□□ 0.61
SND1-203ENST00000463020 SLC4A4Q9Y6R1 1079 aa18.88■□□□□ 0.61
SND1-203ENST00000463020 GRXCR1A8MXD5 290 aa18.87■□□□□ 0.61
SND1-203ENST00000463020 DNAJB2P25686 324 aa18.87■□□□□ 0.61
SND1-203ENST00000463020 PBX2P40425 430 aa18.87■□□□□ 0.61
SND1-203ENST00000463020 KCNA10Q16322 511 aa18.87■□□□□ 0.61
SND1-203ENST00000463020 HAUS7Q99871 368 aa18.87■□□□□ 0.61
SND1-203ENST00000463020 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.87■□□□□ 0.61
SND1-203ENST00000463020 KANSL2Q9H9L4 492 aa18.87■□□□□ 0.61
SND1-203ENST00000463020 TBX21Q9UL17 535 aa18.87■□□□□ 0.61
SND1-203ENST00000463020 DIS3Q9Y2L1 958 aaKnown RBP18.87■□□□□ 0.61
SND1-203ENST00000463020 DNAJC25-GNG10A0A024R161 153 aa18.86■□□□□ 0.61
SND1-203ENST00000463020 ATP5JP18859 108 aa18.86■□□□□ 0.61
SND1-203ENST00000463020 RASA1P20936 1047 aa18.86■□□□□ 0.61
SND1-203ENST00000463020 PTGS1P23219 599 aa18.86■□□□□ 0.61
SND1-203ENST00000463020 HSP90AB4PQ58FF6 505 aa18.86■□□□□ 0.61
SND1-203ENST00000463020 SNRNP48Q6IEG0 339 aaKnown RBP18.86■□□□□ 0.61
SND1-203ENST00000463020 STARD7Q9NQZ5 370 aa18.86■□□□□ 0.61
SND1-203ENST00000463020 ZHX1Q9UKY1 873 aaPredicted RBP18.86■□□□□ 0.61
SND1-203ENST00000463020 NDUFB10O96000 172 aa18.85■□□□□ 0.61
SND1-203ENST00000463020 SLF1Q9BQI6 1058 aa18.85■□□□□ 0.61
SND1-203ENST00000463020 GOPCQ9HD26 462 aa18.85■□□□□ 0.61
SND1-203ENST00000463020 ZBTB40Q9NUA8 1239 aa18.85■□□□□ 0.61
SND1-203ENST00000463020 DDX49Q9Y6V7 483 aaKnown RBP18.85■□□□□ 0.61
SND1-203ENST00000463020 CTAGE5O15320 804 aa18.84■□□□□ 0.61
SND1-203ENST00000463020 SMARCA5O60264 1052 aaPredicted RBP18.84■□□□□ 0.61
SND1-203ENST00000463020 SLC4A3P48751 1232 aa18.84■□□□□ 0.61
SND1-203ENST00000463020 UBE3CQ15386 1083 aa18.84■□□□□ 0.61
SND1-203ENST00000463020 TOX2Q96NM4 488 aa18.84■□□□□ 0.61
SND1-203ENST00000463020 TSEN34Q9BSV6 310 aaKnown RBP18.84■□□□□ 0.61
SND1-203ENST00000463020 CNPY2Q9Y2B0 182 aa18.84■□□□□ 0.61
SND1-203ENST00000463020 COG6Q9Y2V7 657 aa18.84■□□□□ 0.61
SND1-203ENST00000463020 MYH7P12883 1935 aa18.84■□□□□ 0.61
SND1-203ENST00000463020 SYNGAP1Q96PV0 1343 aa18.83■□□□□ 0.61
SND1-203ENST00000463020 TMEM265A0A087WTH1 108 aa18.83■□□□□ 0.6
SND1-203ENST00000463020 TIMP1P01033 207 aa18.83■□□□□ 0.6
SND1-203ENST00000463020 ACRP10323 421 aa18.83■□□□□ 0.6
SND1-203ENST00000463020 CDK7P50613 346 aa18.83■□□□□ 0.6
SND1-203ENST00000463020 TMEM240Q5SV17 173 aa18.83■□□□□ 0.6
SND1-203ENST00000463020 MAMDC4Q6UXC1 1216 aa18.83■□□□□ 0.6
SND1-203ENST00000463020 TEX13BQ9BXU2 312 aa18.83■□□□□ 0.6
SND1-203ENST00000463020 ZNF576Q9H609 170 aa18.83■□□□□ 0.6
SND1-203ENST00000463020 RAVER2Q9HCJ3 691 aaKnown RBP18.83■□□□□ 0.6
SND1-203ENST00000463020 EPB41L4AQ9HCS5 686 aaPredicted RBP18.83■□□□□ 0.6
SND1-203ENST00000463020 MCM3APO60318 1980 aa18.82■□□□□ 0.6
SND1-203ENST00000463020 IGKV6D-41A0A0C4DH26 115 aa18.82■□□□□ 0.6
SND1-203ENST00000463020 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.82■□□□□ 0.6
SND1-203ENST00000463020 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.82■□□□□ 0.6
SND1-203ENST00000463020 GSG1L2A8MUP6 293 aa18.82■□□□□ 0.6
SND1-203ENST00000463020 F5H6K3 240 aa18.82■□□□□ 0.6
SND1-203ENST00000463020 CSF2RAP15509 400 aa18.82■□□□□ 0.6
SND1-203ENST00000463020 KLRC3Q07444 240 aa18.82■□□□□ 0.6
SND1-203ENST00000463020 RASIP1Q5U651 963 aa18.82■□□□□ 0.6
SND1-203ENST00000463020 RPAP2Q8IXW5 612 aaPredicted RBP18.82■□□□□ 0.6
SND1-203ENST00000463020 CPXCR1Q8N123 301 aa18.82■□□□□ 0.6
SND1-203ENST00000463020 TIFAQ96CG3 184 aa18.82■□□□□ 0.6
SND1-203ENST00000463020 STRBPQ96SI9 672 aaKnown RBP18.82■□□□□ 0.6
SND1-203ENST00000463020 PBX4Q9BYU1 374 aa18.82■□□□□ 0.6
SND1-203ENST00000463020 KATNBL1Q9H079 304 aa18.82■□□□□ 0.6
SND1-203ENST00000463020 FAM184BQ9ULE4 1060 aa18.82■□□□□ 0.6
SND1-203ENST00000463020 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.81■□□□□ 0.6
SND1-203ENST00000463020 DCDC2CA8MYV0 355 aa18.81■□□□□ 0.6
SND1-203ENST00000463020 ASGR1P07306 291 aa18.81■□□□□ 0.6
SND1-203ENST00000463020 ACVR2BQ13705 512 aa18.81■□□□□ 0.6
SND1-203ENST00000463020 CCDC144BQ3MJ40 725 aa18.81■□□□□ 0.6
SND1-203ENST00000463020 TSHZ3Q63HK5 1081 aa18.81■□□□□ 0.6
SND1-203ENST00000463020 MFSD5Q6N075 450 aa18.81■□□□□ 0.6
SND1-203ENST00000463020 PPP1R12CQ9BZL4 782 aa18.81■□□□□ 0.6
SND1-203ENST00000463020 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.81■□□□□ 0.61e-8■■■■□ 23.7
SND1-203ENST00000463020 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.81■□□□□ 0.6
SND1-203ENST00000463020 RAPGEFL1Q9UHV5 662 aa18.81■□□□□ 0.6
SND1-203ENST00000463020 ASTN1O14525 1302 aa18.8■□□□□ 0.6
SND1-203ENST00000463020 UMODL1Q5DID0 1318 aa18.8■□□□□ 0.6
SND1-203ENST00000463020 MOXD2PA6NHM9 499 aa18.8■□□□□ 0.6
SND1-203ENST00000463020 RAB11FIP3O75154 756 aa18.8■□□□□ 0.6
SND1-203ENST00000463020 DUSP11O75319 330 aaKnown RBP18.8■□□□□ 0.6
SND1-203ENST00000463020 PRDM1O75626 825 aa18.8■□□□□ 0.6
SND1-203ENST00000463020 C6orf222P0C671 652 aaPredicted RBP18.8■□□□□ 0.6
SND1-203ENST00000463020 CST5P28325 142 aaPredicted RBP18.8■□□□□ 0.6
SND1-203ENST00000463020 BEX3Q00994 111 aa18.8■□□□□ 0.6
SND1-203ENST00000463020 CNTN2Q02246 1040 aa18.8■□□□□ 0.6
SND1-203ENST00000463020 ADGRE1Q14246 886 aa18.8■□□□□ 0.6
SND1-203ENST00000463020 NUP133Q8WUM0 1156 aa18.8■□□□□ 0.6
SND1-203ENST00000463020 PPM1EQ8WY54 764 aa18.8■□□□□ 0.6
SND1-203ENST00000463020 OSBP2Q969R2 916 aa18.8■□□□□ 0.6
SND1-203ENST00000463020 KIFC2Q96AC6 838 aa18.8■□□□□ 0.6
SND1-203ENST00000463020 DDX11Q96FC9 970 aa18.8■□□□□ 0.6
SND1-203ENST00000463020 UPF3AQ9H1J1 476 aaKnown RBP18.8■□□□□ 0.6
SND1-203ENST00000463020 PRDM12Q9H4Q4 367 aa18.8■□□□□ 0.6
SND1-203ENST00000463020 CXXC1Q9P0U4 656 aaPredicted RBP18.8■□□□□ 0.6
SND1-203ENST00000463020 NYAP2Q9P242 653 aa18.8■□□□□ 0.6
SND1-203ENST00000463020 ARPP21Q9UBL0 812 aaPredicted RBP18.8■□□□□ 0.6
SND1-203ENST00000463020 CLIP2Q9UDT6 1046 aa18.8■□□□□ 0.6
SND1-203ENST00000463020 COPB2P35606 906 aa18.79■□□□□ 0.6
SND1-203ENST00000463020 TMEM63BQ5T3F8 832 aa18.79■□□□□ 0.6
SND1-203ENST00000463020 ARMCX2Q7L311 632 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms