RNA–Protein interactions for RNA: ENST00000462257.1

SH3D19-205, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-205ENST00000462257 USP17L10C9JJH3 530 aa8.69□□□□□ -1.02
SH3D19-205ENST00000462257 DNM1LO00429 736 aa8.69□□□□□ -1.02
SH3D19-205ENST00000462257 F12P00748 615 aaPredicted RBP8.69□□□□□ -1.02
SH3D19-205ENST00000462257 BMP1P13497 986 aa8.69□□□□□ -1.02
SH3D19-205ENST00000462257 RHBDL3P58872 404 aa8.69□□□□□ -1.02
SH3D19-205ENST00000462257 ERVK-9P63128 1117 aa8.69□□□□□ -1.02
SH3D19-205ENST00000462257 ERVK-24P63145 666 aa8.69□□□□□ -1.02
SH3D19-205ENST00000462257 SMAD3P84022 425 aaKnown RBP8.69□□□□□ -1.02
SH3D19-205ENST00000462257 MECOMQ03112 1051 aa8.69□□□□□ -1.02
SH3D19-205ENST00000462257 MVPQ14764 893 aaKnown RBP8.69□□□□□ -1.02
SH3D19-205ENST00000462257 CCDC84Q86UT8 332 aaPredicted RBP8.69□□□□□ -1.02
SH3D19-205ENST00000462257 FOXP4Q8IVH2 680 aaPredicted RBP8.69□□□□□ -1.02
SH3D19-205ENST00000462257 ARRDC4Q8NCT1 418 aa8.69□□□□□ -1.02
SH3D19-205ENST00000462257 LPAR1Q92633 364 aa8.69□□□□□ -1.02
SH3D19-205ENST00000462257 FAM161BQ96MY7 647 aa8.69□□□□□ -1.02
SH3D19-205ENST00000462257 RBPJLQ9UBG7 517 aa8.69□□□□□ -1.02
SH3D19-205ENST00000462257 MAST2Q6P0Q8 1798 aa8.68□□□□□ -1.02
SH3D19-205ENST00000462257 FRMPD3Q5JV73 1810 aa8.68□□□□□ -1.02
SH3D19-205ENST00000462257 DNAH12Q6ZR08 3092 aa8.68□□□□□ -1.02
SH3D19-205ENST00000462257 CAPN5O15484 640 aaPredicted RBP8.68□□□□□ -1.02
SH3D19-205ENST00000462257 IGSF3O75054 1194 aa8.68□□□□□ -1.02
SH3D19-205ENST00000462257 UBTFL1P0CB47 393 aaPredicted RBP8.68□□□□□ -1.02
SH3D19-205ENST00000462257 CCND3P30281 292 aaPredicted RBP8.68□□□□□ -1.02
SH3D19-205ENST00000462257 ATP2B2Q01814 1243 aa8.68□□□□□ -1.02
SH3D19-205ENST00000462257 RASGRF1Q13972 1273 aa8.68□□□□□ -1.02
SH3D19-205ENST00000462257 ATF7IPQ6VMQ6 1270 aa8.68□□□□□ -1.02
SH3D19-205ENST00000462257 GPR142Q7Z601 462 aa8.68□□□□□ -1.02
SH3D19-205ENST00000462257 KCTD17Q8N5Z5 321 aa8.68□□□□□ -1.02
SH3D19-205ENST00000462257 SSH1Q8WYL5 1049 aa8.68□□□□□ -1.02
SH3D19-205ENST00000462257 TRIM34Q9BYJ4 488 aa8.68□□□□□ -1.02
SH3D19-205ENST00000462257 SIL1Q9H173 461 aa8.68□□□□□ -1.02
SH3D19-205ENST00000462257 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.68□□□□□ -1.02
SH3D19-205ENST00000462257 DDX20Q9UHI6 824 aaKnown RBP8.68□□□□□ -1.02
SH3D19-205ENST00000462257 RABGAP1Q9Y3P9 1069 aa8.68□□□□□ -1.02
SH3D19-205ENST00000462257 IVNS1ABPQ9Y6Y0 642 aa8.68□□□□□ -1.02
SH3D19-205ENST00000462257 SLC15A5A6NIM6 579 aa8.67□□□□□ -1.02
SH3D19-205ENST00000462257 FAM196BA6NMK8 535 aa8.67□□□□□ -1.02
SH3D19-205ENST00000462257 LILRB3O75022 631 aa8.67□□□□□ -1.02
SH3D19-205ENST00000462257 BAG3O95817 575 aa8.67□□□□□ -1.02
SH3D19-205ENST00000462257 HOXC6P09630 235 aa8.67□□□□□ -1.02
SH3D19-205ENST00000462257 VARSP26640 1264 aaKnown RBP8.67□□□□□ -1.02
SH3D19-205ENST00000462257 CNGA1P29973 690 aa8.67□□□□□ -1.02
SH3D19-205ENST00000462257 RARSP54136 660 aaKnown RBP8.67□□□□□ -1.02
SH3D19-205ENST00000462257 TIMM10P62072 90 aa8.67□□□□□ -1.02
SH3D19-205ENST00000462257 QPCTQ16769 361 aa8.67□□□□□ -1.02
SH3D19-205ENST00000462257 CSPP1Q1MSJ5 1256 aa8.67□□□□□ -1.02
SH3D19-205ENST00000462257 USP17L2Q6R6M4 530 aa8.67□□□□□ -1.02
SH3D19-205ENST00000462257 CRACR2BQ8N4Y2 399 aaPredicted RBP8.67□□□□□ -1.02
SH3D19-205ENST00000462257 COPRSQ9NQ92 184 aa8.67□□□□□ -1.02
SH3D19-205ENST00000462257 SMC4Q9NTJ3 1288 aa8.67□□□□□ -1.02
SH3D19-205ENST00000462257 USP17L15C9J2P7 530 aa8.66□□□□□ -1.02
SH3D19-205ENST00000462257 USP17L13C9JLJ4 530 aa8.66□□□□□ -1.02
SH3D19-205ENST00000462257 KBTBD13C9JR72 458 aa8.66□□□□□ -1.02
SH3D19-205ENST00000462257 USP17L11C9JVI0 530 aa8.66□□□□□ -1.02
SH3D19-205ENST00000462257 USP17L18D6R9N7 530 aa8.66□□□□□ -1.02
SH3D19-205ENST00000462257 USP17L22D6RA61 530 aa8.66□□□□□ -1.02
SH3D19-205ENST00000462257 USP17L17D6RBQ6 530 aa8.66□□□□□ -1.02
SH3D19-205ENST00000462257 USP17L19D6RCP7 530 aa8.66□□□□□ -1.02
SH3D19-205ENST00000462257 USP17L20D6RJB6 530 aa8.66□□□□□ -1.02
SH3D19-205ENST00000462257 STRNO43815 780 aa8.66□□□□□ -1.02
SH3D19-205ENST00000462257 SLURP2P0DP57 97 aa8.66□□□□□ -1.02
SH3D19-205ENST00000462257 FOSL2P15408 326 aa8.66□□□□□ -1.02
SH3D19-205ENST00000462257 CTHP32929 405 aa8.66□□□□□ -1.02
SH3D19-205ENST00000462257 RTP1P59025 263 aa8.66□□□□□ -1.02
SH3D19-205ENST00000462257 USP17L24Q0WX57 530 aa8.66□□□□□ -1.02
SH3D19-205ENST00000462257 KCNMA1Q12791 1236 aa8.66□□□□□ -1.02
SH3D19-205ENST00000462257 SHHQ15465 462 aa8.66□□□□□ -1.02
SH3D19-205ENST00000462257 CCL14Q16627 93 aa8.66□□□□□ -1.02
SH3D19-205ENST00000462257 GORABQ5T7V8 394 aa8.66□□□□□ -1.02
SH3D19-205ENST00000462257 SLC39A5Q6ZMH5 540 aa8.66□□□□□ -1.02
SH3D19-205ENST00000462257 TRIM46Q7Z4K8 759 aa8.66□□□□□ -1.02
SH3D19-205ENST00000462257 METTL16Q86W50 562 aaKnown RBP8.66□□□□□ -1.02
SH3D19-205ENST00000462257 TEX11Q8IYF3 940 aa8.66□□□□□ -1.02
SH3D19-205ENST00000462257 NSUN4Q96CB9 384 aaKnown RBP8.66□□□□□ -1.02
SH3D19-205ENST00000462257 XAGE2Q96GT9 111 aa8.66□□□□□ -1.02
SH3D19-205ENST00000462257 PAGR1Q9BTK6 254 aa8.66□□□□□ -1.02
SH3D19-205ENST00000462257 PORCNQ9H237 461 aa8.66□□□□□ -1.02
SH3D19-205ENST00000462257 TXNRD2Q9NNW7 524 aa8.66□□□□□ -1.02
SH3D19-205ENST00000462257 RAI14Q9P0K7 980 aa8.66□□□□□ -1.02
SH3D19-205ENST00000462257 MAP10Q9P2G4 905 aa8.66□□□□□ -1.02
SH3D19-205ENST00000462257 WASF2Q9Y6W5 498 aa8.66□□□□□ -1.02
SH3D19-205ENST00000462257 LAMA2P24043 3122 aaKnown RBP8.66□□□□□ -1.02
SH3D19-205ENST00000462257 LTBP2Q14767 1821 aa8.66□□□□□ -1.02
SH3D19-205ENST00000462257 RLFQ13129 1914 aa8.65□□□□□ -1.02
SH3D19-205ENST00000462257 A0A1B0GUL7 405 aa8.65□□□□□ -1.02
SH3D19-205ENST00000462257 IPO8O15397 1037 aaKnown RBP8.65□□□□□ -1.02
SH3D19-205ENST00000462257 USP14P54578 494 aa8.65□□□□□ -1.02
SH3D19-205ENST00000462257 C1orf53Q5VUE5 145 aa8.65□□□□□ -1.02
SH3D19-205ENST00000462257 SPATA5Q8NB90 893 aa8.65□□□□□ -1.02
SH3D19-205ENST00000462257 MYLIPQ8WY64 445 aa8.65□□□□□ -1.02
SH3D19-205ENST00000462257 ARHGAP45Q92619 1136 aa8.65□□□□□ -1.02
SH3D19-205ENST00000462257 SLC5A4Q9NY91 659 aa8.65□□□□□ -1.02
SH3D19-205ENST00000462257 LRP2BPQ9P2M1 347 aa8.65□□□□□ -1.02
SH3D19-205ENST00000462257 ATP11BQ9Y2G3 1177 aa8.65□□□□□ -1.02
SH3D19-205ENST00000462257 TACC3Q9Y6A5 838 aa8.65□□□□□ -1.02
SH3D19-205ENST00000462257 HLA-DOAP06340 250 aa8.64□□□□□ -1.03
SH3D19-205ENST00000462257 UQCRFS1P1P0C7P4 283 aa8.64□□□□□ -1.03
SH3D19-205ENST00000462257 ADORA1P30542 326 aa8.64□□□□□ -1.03
SH3D19-205ENST00000462257 RRP1BQ14684 758 aaKnown RBP8.64□□□□□ -1.03
SH3D19-205ENST00000462257 WDR78Q5VTH9 848 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms