RNA–Protein interactions for RNA: ENST00000462256.5

DDX39B-215, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 4,027 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-215ENST00000462256 SDF4Q9BRK5 362 aa10.59□□□□□ -0.71
DDX39B-215ENST00000462256 MTMR4Q9NYA4 1195 aa10.59□□□□□ -0.71
DDX39B-215ENST00000462256 ZSWIM5Q9P217 1185 aa10.59□□□□□ -0.71
DDX39B-215ENST00000462256 RABGAP1Q9Y3P9 1069 aa10.59□□□□□ -0.71
DDX39B-215ENST00000462256 BRWD3Q6RI45 1802 aa10.59□□□□□ -0.71
DDX39B-215ENST00000462256 HERVK_113P62684 666 aa10.58□□□□□ -0.72
DDX39B-215ENST00000462256 MCTP2Q6DN12 878 aa10.58□□□□□ -0.72
DDX39B-215ENST00000462256 SEPT14Q6ZU15 432 aa10.58□□□□□ -0.72
DDX39B-215ENST00000462256 CLEC10AQ8IUN9 316 aa10.58□□□□□ -0.72
DDX39B-215ENST00000462256 ZFPM1Q8IX07 1006 aa10.58□□□□□ -0.72
DDX39B-215ENST00000462256 TRERF1Q96PN7 1200 aa10.58□□□□□ -0.72
DDX39B-215ENST00000462256 TCP11L1Q9NUJ3 509 aa10.58□□□□□ -0.72
DDX39B-215ENST00000462256 ASB14A6NK59 587 aa10.58□□□□□ -0.72
DDX39B-215ENST00000462256 KIF3CO14782 793 aa10.58□□□□□ -0.72
DDX39B-215ENST00000462256 GSPT1P15170 499 aaKnown RBP10.58□□□□□ -0.72
DDX39B-215ENST00000462256 CCDC73Q6ZRK6 1079 aa10.58□□□□□ -0.72
DDX39B-215ENST00000462256 SAPCD2Q86UD0 394 aa10.58□□□□□ -0.72
DDX39B-215ENST00000462256 NECAB1Q8N987 351 aa10.58□□□□□ -0.72
DDX39B-215ENST00000462256 NAP1L4Q99733 375 aaKnown RBP10.58□□□□□ -0.72
DDX39B-215ENST00000462256 hCG_1642624A0A1W2PR95 340 aa10.58□□□□□ -0.72
DDX39B-215ENST00000462256 USP2O75604 605 aaPredicted RBP10.58□□□□□ -0.72
DDX39B-215ENST00000462256 CDC37Q16543 378 aaPredicted RBP10.58□□□□□ -0.72
DDX39B-215ENST00000462256 RUFY3Q7L099 469 aa10.58□□□□□ -0.72
DDX39B-215ENST00000462256 ATG4CQ96DT6 458 aa10.58□□□□□ -0.72
DDX39B-215ENST00000462256 RPS6KB1P23443 525 aa10.57□□□□□ -0.72
DDX39B-215ENST00000462256 REXO1Q8N1G1 1221 aaKnown RBP10.57□□□□□ -0.72
DDX39B-215ENST00000462256 PROCA1Q8NCQ7 364 aaPredicted RBP10.57□□□□□ -0.72
DDX39B-215ENST00000462256 AGTPBP1Q9UPW5 1226 aa10.57□□□□□ -0.72
DDX39B-215ENST00000462256 TLL2Q9Y6L7 1015 aa10.57□□□□□ -0.72
DDX39B-215ENST00000462256 ORC4O43929 436 aa10.57□□□□□ -0.72
DDX39B-215ENST00000462256 DEXIO95424 95 aa10.57□□□□□ -0.72
DDX39B-215ENST00000462256 CYP21A2P08686 494 aa10.57□□□□□ -0.72
DDX39B-215ENST00000462256 CPA1P15085 419 aa10.57□□□□□ -0.72
DDX39B-215ENST00000462256 LIG1P18858 919 aa10.57□□□□□ -0.72
DDX39B-215ENST00000462256 SNAP25P60880 206 aa10.57□□□□□ -0.72
DDX39B-215ENST00000462256 TPD52L1Q16890 204 aaPredicted RBP10.57□□□□□ -0.72
DDX39B-215ENST00000462256 MAP4K1Q92918 833 aa10.57□□□□□ -0.72
DDX39B-215ENST00000462256 GMLQ99445 158 aa10.57□□□□□ -0.72
DDX39B-215ENST00000462256 RIOK1Q9BRS2 568 aaKnown RBP10.57□□□□□ -0.72
DDX39B-215ENST00000462256 ASCC2Q9H1I8 757 aaPredicted RBP10.57□□□□□ -0.72
DDX39B-215ENST00000462256 NR2E3Q9Y5X4 410 aa10.57□□□□□ -0.72
DDX39B-215ENST00000462256 SCN11AQ9UI33 1791 aa10.57□□□□□ -0.72
DDX39B-215ENST00000462256 DKC1O60832 514 aaKnown RBP eCLIP10.57□□□□□ -0.725e-19■■□□□ 13.7
DDX39B-215ENST00000462256 FOSP01100 380 aaPredicted RBP10.57□□□□□ -0.72
DDX39B-215ENST00000462256 SMCO2A6NFE2 343 aa10.56□□□□□ -0.72
DDX39B-215ENST00000462256 NPM3O75607 178 aaKnown RBP10.56□□□□□ -0.72
DDX39B-215ENST00000462256 RASA1P20936 1047 aa10.56□□□□□ -0.72
DDX39B-215ENST00000462256 CA8P35219 290 aa10.56□□□□□ -0.72
DDX39B-215ENST00000462256 LBX1P52954 281 aa10.56□□□□□ -0.72
DDX39B-215ENST00000462256 CDHR1Q96JP9 859 aa10.56□□□□□ -0.72
DDX39B-215ENST00000462256 KIAA1683Q9H0B3 1180 aa10.56□□□□□ -0.72
DDX39B-215ENST00000462256 PRDM5Q9NQX1 630 aaPredicted RBP10.56□□□□□ -0.72
DDX39B-215ENST00000462256 RHBDL3P58872 404 aa10.56□□□□□ -0.72
DDX39B-215ENST00000462256 NUCB2P80303 420 aa10.56□□□□□ -0.72
DDX39B-215ENST00000462256 UNCXA6NJT0 531 aa10.56□□□□□ -0.72
DDX39B-215ENST00000462256 RARBP10826 455 aa10.56□□□□□ -0.72
DDX39B-215ENST00000462256 EIF2AK2P19525 551 aaKnown RBP10.56□□□□□ -0.72
DDX39B-215ENST00000462256 DHX8Q14562 1220 aaKnown RBP10.56□□□□□ -0.72
DDX39B-215ENST00000462256 LETM2Q2VYF4 491 aa10.56□□□□□ -0.72
DDX39B-215ENST00000462256 FERMT3Q86UX7 667 aa10.56□□□□□ -0.72
DDX39B-215ENST00000462256 SOCS4Q8WXH5 440 aa10.56□□□□□ -0.72
DDX39B-215ENST00000462256 MROH8Q9H579 483 aa10.56□□□□□ -0.72
DDX39B-215ENST00000462256 AK9Q5TCS8 1911 aa10.56□□□□□ -0.72
DDX39B-215ENST00000462256 VCAM1P19320 739 aa10.55□□□□□ -0.72
DDX39B-215ENST00000462256 UBA7P41226 1012 aa10.55□□□□□ -0.72
DDX39B-215ENST00000462256 C8orf34Q49A92 452 aa10.55□□□□□ -0.72
DDX39B-215ENST00000462256 DDX39AO00148 427 aaKnown RBP10.55□□□□□ -0.72
DDX39B-215ENST00000462256 TBC1D12O60347 775 aa10.55□□□□□ -0.72
DDX39B-215ENST00000462256 ME1P48163 572 aa10.55□□□□□ -0.72
DDX39B-215ENST00000462256 PLCB2Q00722 1185 aa10.55□□□□□ -0.72
DDX39B-215ENST00000462256 UTP14CQ5TAP6 766 aaKnown RBP10.55□□□□□ -0.72
DDX39B-215ENST00000462256 ARRDC4Q8NCT1 418 aa10.55□□□□□ -0.72
DDX39B-215ENST00000462256 NSUN6Q8TEA1 469 aaKnown RBP10.55□□□□□ -0.72
DDX39B-215ENST00000462256 RMDN3Q96TC7 470 aa10.55□□□□□ -0.72
DDX39B-215ENST00000462256 P2RX7Q99572 595 aaKnown RBP10.55□□□□□ -0.72
DDX39B-215ENST00000462256 HMX1Q9NP08 348 aaPredicted RBP10.55□□□□□ -0.72
DDX39B-215ENST00000462256 KCNG1Q9UIX4 513 aa10.55□□□□□ -0.72
DDX39B-215ENST00000462256 GPR25O00155 361 aa10.55□□□□□ -0.72
DDX39B-215ENST00000462256 PES1O00541 588 aaKnown RBP10.55□□□□□ -0.72
DDX39B-215ENST00000462256 ADCY3O60266 1144 aa10.55□□□□□ -0.72
DDX39B-215ENST00000462256 NMT2O60551 498 aa10.55□□□□□ -0.72
DDX39B-215ENST00000462256 STXBP2Q15833 593 aa10.55□□□□□ -0.72
DDX39B-215ENST00000462256 TKFCQ3LXA3 575 aa10.55□□□□□ -0.72
DDX39B-215ENST00000462256 RETREG2Q8NC44 543 aa10.55□□□□□ -0.72
DDX39B-215ENST00000462256 ZNF830Q96NB3 372 aaPredicted RBP10.55□□□□□ -0.72
DDX39B-215ENST00000462256 INCENPQ9NQS7 918 aa10.55□□□□□ -0.72
DDX39B-215ENST00000462256 FAM13BQ9NYF5 915 aa10.55□□□□□ -0.72
DDX39B-215ENST00000462256 TRPC6Q9Y210 931 aa10.55□□□□□ -0.72
DDX39B-215ENST00000462256 MYPNQ86TC9 1320 aa10.55□□□□□ -0.72
DDX39B-215ENST00000462256 K7ELQ4 463 aaPredicted RBP10.55□□□□□ -0.72
DDX39B-215ENST00000462256 C6orf222P0C671 652 aaPredicted RBP10.55□□□□□ -0.72
DDX39B-215ENST00000462256 KRT2P35908 639 aa10.55□□□□□ -0.72
DDX39B-215ENST00000462256 PIGSQ96S52 555 aa10.55□□□□□ -0.72
DDX39B-215ENST00000462256 TMX2Q9Y320 296 aa10.55□□□□□ -0.72
DDX39B-215ENST00000462256 SNX14Q9Y5W7 946 aa10.55□□□□□ -0.72
DDX39B-215ENST00000462256 BTBD19C9JJ37 291 aa10.54□□□□□ -0.72
DDX39B-215ENST00000462256 CHMP2AO43633 222 aa10.54□□□□□ -0.72
DDX39B-215ENST00000462256 SORBS3O60504 671 aa10.54□□□□□ -0.72
DDX39B-215ENST00000462256 ERCC3P19447 782 aa10.54□□□□□ -0.72
DDX39B-215ENST00000462256 CTU1Q7Z7A3 348 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms