RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 RGS2P41220 211 aa7.28□□□□□ -1.24
SMARCC1-204ENST00000462198 USP46P62068 366 aa7.28□□□□□ -1.24
SMARCC1-204ENST00000462198 FOXO4P98177 505 aa7.28□□□□□ -1.24
SMARCC1-204ENST00000462198 TLE2Q04725 743 aa7.28□□□□□ -1.24
SMARCC1-204ENST00000462198 VAC14Q08AM6 782 aa7.28□□□□□ -1.24
SMARCC1-204ENST00000462198 NFIAQ12857 509 aa7.28□□□□□ -1.24
SMARCC1-204ENST00000462198 SPP2Q13103 211 aa7.28□□□□□ -1.24
SMARCC1-204ENST00000462198 PABPC4Q13310 644 aaKnown RBP eCLIP7.28□□□□□ -1.24
SMARCC1-204ENST00000462198 MVPQ14764 893 aaKnown RBP7.28□□□□□ -1.24
SMARCC1-204ENST00000462198 C20orf194Q5TEA3 1177 aa7.28□□□□□ -1.24
SMARCC1-204ENST00000462198 CDC42EP5Q6NZY7 148 aa7.28□□□□□ -1.24
SMARCC1-204ENST00000462198 LMBR1LQ6UX01 489 aa7.28□□□□□ -1.24
SMARCC1-204ENST00000462198 FBXO33Q7Z6M2 555 aa7.28□□□□□ -1.24
SMARCC1-204ENST00000462198 VPS37DQ86XT2 251 aa7.28□□□□□ -1.24
SMARCC1-204ENST00000462198 CCAR1Q8IX12 1150 aaKnown RBP7.28□□□□□ -1.24
SMARCC1-204ENST00000462198 GPRC5AQ8NFJ5 357 aa7.28□□□□□ -1.24
SMARCC1-204ENST00000462198 SUCLG2Q96I99 432 aa7.28□□□□□ -1.24
SMARCC1-204ENST00000462198 ZNF594Q96JF6 807 aaPredicted RBP7.28□□□□□ -1.24
SMARCC1-204ENST00000462198 PBX4Q9BYU1 374 aa7.28□□□□□ -1.24
SMARCC1-204ENST00000462198 CHMP4BQ9H444 224 aaKnown RBP7.28□□□□□ -1.24
SMARCC1-204ENST00000462198 CNNM1Q9NRU3 951 aa7.28□□□□□ -1.24
SMARCC1-204ENST00000462198 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.28□□□□□ -1.24
SMARCC1-204ENST00000462198 DDX19BQ9UMR2 479 aa7.28□□□□□ -1.24
SMARCC1-204ENST00000462198 DAGLAQ9Y4D2 1042 aa7.28□□□□□ -1.24
SMARCC1-204ENST00000462198 SPTBN4Q9H254 2564 aa7.27□□□□□ -1.25
SMARCC1-204ENST00000462198 A0A0U1RQG5 324 aaPredicted RBP7.27□□□□□ -1.25
SMARCC1-204ENST00000462198 PRR33A8MZF0 331 aa7.27□□□□□ -1.25
SMARCC1-204ENST00000462198 ERC2O15083 957 aa7.27□□□□□ -1.25
SMARCC1-204ENST00000462198 GNAI2P04899 355 aa7.27□□□□□ -1.25
SMARCC1-204ENST00000462198 SLURP2P0DP57 97 aa7.27□□□□□ -1.25
SMARCC1-204ENST00000462198 MAPK4P31152 587 aa7.27□□□□□ -1.25
SMARCC1-204ENST00000462198 SOX11P35716 441 aa7.27□□□□□ -1.25
SMARCC1-204ENST00000462198 ADCYAP1R1P41586 468 aa7.27□□□□□ -1.25
SMARCC1-204ENST00000462198 IRX6P78412 446 aaPredicted RBP7.27□□□□□ -1.25
SMARCC1-204ENST00000462198 MAP3K10Q02779 954 aa7.27□□□□□ -1.25
SMARCC1-204ENST00000462198 FPGSQ05932 587 aa7.27□□□□□ -1.25
SMARCC1-204ENST00000462198 CTDSPL2Q05D32 466 aa7.27□□□□□ -1.25
SMARCC1-204ENST00000462198 SNX17Q15036 470 aa7.27□□□□□ -1.25
SMARCC1-204ENST00000462198 CCDC57Q2TAC2 916 aa7.27□□□□□ -1.25
SMARCC1-204ENST00000462198 Q3C1V9 767 aa7.27□□□□□ -1.25
SMARCC1-204ENST00000462198 EPHA10Q5JZY3 1008 aa7.27□□□□□ -1.25
SMARCC1-204ENST00000462198 MORN1Q5T089 497 aa7.27□□□□□ -1.25
SMARCC1-204ENST00000462198 MFSD14CQ5VZR4 134 aa7.27□□□□□ -1.25
SMARCC1-204ENST00000462198 B4GALNT3Q6L9W6 998 aa7.27□□□□□ -1.25
SMARCC1-204ENST00000462198 MICALL1Q8N3F8 863 aa7.27□□□□□ -1.25
SMARCC1-204ENST00000462198 FERMT2Q96AC1 680 aa7.27□□□□□ -1.25
SMARCC1-204ENST00000462198 EDC3Q96F86 508 aaKnown RBP7.27□□□□□ -1.25
SMARCC1-204ENST00000462198 KAZALD1Q96I82 304 aa7.27□□□□□ -1.25
SMARCC1-204ENST00000462198 FBXL18Q96ME1 805 aa7.27□□□□□ -1.25
SMARCC1-204ENST00000462198 UIMC1Q96RL1 719 aa7.27□□□□□ -1.25
SMARCC1-204ENST00000462198 BICC1Q9H694 974 aaKnown RBP7.27□□□□□ -1.25
SMARCC1-204ENST00000462198 USP40Q9NVE5 1235 aa7.27□□□□□ -1.25
SMARCC1-204ENST00000462198 MAFBQ9Y5Q3 323 aaPredicted RBP7.27□□□□□ -1.25
SMARCC1-204ENST00000462198 ZDBF2Q9HCK1 2354 aa7.27□□□□□ -1.25
SMARCC1-204ENST00000462198 MAST3O60307 1309 aa7.27□□□□□ -1.25
SMARCC1-204ENST00000462198 XIRP2A4UGR9 3374 aa7.26□□□□□ -1.25
SMARCC1-204ENST00000462198 PRRC2BQ5JSZ5 2229 aaKnown RBP7.26□□□□□ -1.25
SMARCC1-204ENST00000462198 KBTBD13C9JR72 458 aa7.26□□□□□ -1.25
SMARCC1-204ENST00000462198 KIAA0355O15063 1070 aa7.26□□□□□ -1.25
SMARCC1-204ENST00000462198 HMGCS2P54868 508 aa7.26□□□□□ -1.25
SMARCC1-204ENST00000462198 FOXK2Q01167 660 aa7.26□□□□□ -1.25
SMARCC1-204ENST00000462198 ATP2B2Q01814 1243 aa7.26□□□□□ -1.25
SMARCC1-204ENST00000462198 HSP90AA2PQ14568 343 aaPredicted RBP7.26□□□□□ -1.25
SMARCC1-204ENST00000462198 RABL6Q3YEC7 729 aaPredicted RBP7.26□□□□□ -1.25
SMARCC1-204ENST00000462198 C1orf53Q5VUE5 145 aa7.26□□□□□ -1.25
SMARCC1-204ENST00000462198 GPR142Q7Z601 462 aa7.26□□□□□ -1.25
SMARCC1-204ENST00000462198 PLEKHH3Q7Z736 793 aa7.26□□□□□ -1.25
SMARCC1-204ENST00000462198 ANKRD44Q8N8A2 993 aa7.26□□□□□ -1.25
SMARCC1-204ENST00000462198 HERVK_113Q902F9 699 aa7.26□□□□□ -1.25
SMARCC1-204ENST00000462198 NAP1L5Q96NT1 182 aaPredicted RBP7.26□□□□□ -1.25
SMARCC1-204ENST00000462198 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.26□□□□□ -1.253e-17■□□□□ 10.1
SMARCC1-204ENST00000462198 TXNRD2Q9NNW7 524 aa7.26□□□□□ -1.25
SMARCC1-204ENST00000462198 FLRT1Q9NZU1 646 aa7.26□□□□□ -1.25
SMARCC1-204ENST00000462198 RBPJLQ9UBG7 517 aa7.26□□□□□ -1.25
SMARCC1-204ENST00000462198 MSRAQ9UJ68 235 aa7.26□□□□□ -1.25
SMARCC1-204ENST00000462198 PCDHGC3Q9UN70 934 aa7.26□□□□□ -1.25
SMARCC1-204ENST00000462198 SUGT1Q9Y2Z0 365 aa7.26□□□□□ -1.25
SMARCC1-204ENST00000462198 SMCHD1A6NHR9 2005 aa7.25□□□□□ -1.25
SMARCC1-204ENST00000462198 MYH13Q9UKX3 1938 aa7.25□□□□□ -1.25
SMARCC1-204ENST00000462198 CLTBP09497 229 aa7.25□□□□□ -1.25
SMARCC1-204ENST00000462198 FDX1P10109 184 aa7.25□□□□□ -1.25
SMARCC1-204ENST00000462198 IRX3P78415 501 aaPredicted RBP7.25□□□□□ -1.25
SMARCC1-204ENST00000462198 CAVIN4Q5BKX8 364 aa7.25□□□□□ -1.25
SMARCC1-204ENST00000462198 ANO1Q5XXA6 986 aa7.25□□□□□ -1.25
SMARCC1-204ENST00000462198 NUDT18Q6ZVK8 323 aa7.25□□□□□ -1.25
SMARCC1-204ENST00000462198 C16orf59Q7L2K0 433 aa7.25□□□□□ -1.25
SMARCC1-204ENST00000462198 SH3BP5LQ7L8J4 393 aa7.25□□□□□ -1.25
SMARCC1-204ENST00000462198 ZSCAN29Q8IWY8 852 aaPredicted RBP7.25□□□□□ -1.25
SMARCC1-204ENST00000462198 ZNF280CQ8ND82 737 aa7.25□□□□□ -1.25
SMARCC1-204ENST00000462198 TRPV1Q8NER1 839 aa7.25□□□□□ -1.25
SMARCC1-204ENST00000462198 PRR7Q8TB68 274 aa7.25□□□□□ -1.25
SMARCC1-204ENST00000462198 APBA2Q99767 749 aa7.25□□□□□ -1.25
SMARCC1-204ENST00000462198 PORCNQ9H237 461 aa7.25□□□□□ -1.25
SMARCC1-204ENST00000462198 SLC28A3Q9HAS3 691 aa7.25□□□□□ -1.25
SMARCC1-204ENST00000462198 CD320Q9NPF0 282 aa7.25□□□□□ -1.25
SMARCC1-204ENST00000462198 TMEM39AQ9NV64 488 aa7.25□□□□□ -1.25
SMARCC1-204ENST00000462198 TFIP11Q9UBB9 837 aaKnown RBP7.25□□□□□ -1.25
SMARCC1-204ENST00000462198 DOCK1Q14185 1865 aa7.24□□□□□ -1.25
SMARCC1-204ENST00000462198 ATRNL1Q5VV63 1379 aa7.24□□□□□ -1.25
SMARCC1-204ENST00000462198 WDFY4Q6ZS81 3184 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms