RNA–Protein interactions for RNA: ENST00000461710.5

CDK5RAP1-207, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 2

Gene CDK5RAP1, Length 2,650 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-207ENST00000461710 SMARCC1Q92922 1105 aaPredicted RBP12.92□□□□□ -0.34
CDK5RAP1-207ENST00000461710 GDAP1L1Q96MZ0 367 aa12.92□□□□□ -0.34
CDK5RAP1-207ENST00000461710 SELENOOQ9BVL4 669 aa12.92□□□□□ -0.34
CDK5RAP1-207ENST00000461710 TRMT112Q9UI30 125 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP1-207ENST00000461710 TRIM49BA6NDI0 452 aa12.92□□□□□ -0.34
CDK5RAP1-207ENST00000461710 MEA1Q16626 185 aa12.92□□□□□ -0.34
CDK5RAP1-207ENST00000461710 DNAJC21Q5F1R6 531 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP1-207ENST00000461710 CCNI2Q6ZMN8 369 aaPredicted RBP12.92□□□□□ -0.34
CDK5RAP1-207ENST00000461710 EFCAB13Q8IY85 973 aa12.92□□□□□ -0.34
CDK5RAP1-207ENST00000461710 GSPT2Q8IYD1 628 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP1-207ENST00000461710 EHBP1Q8NDI1 1231 aa12.92□□□□□ -0.34
CDK5RAP1-207ENST00000461710 ANAPC4Q9UJX5 808 aa12.92□□□□□ -0.34
CDK5RAP1-207ENST00000461710 PDE2AO00408 941 aaPredicted RBP12.91□□□□□ -0.34
CDK5RAP1-207ENST00000461710 CPP00450 1065 aa12.91□□□□□ -0.34
CDK5RAP1-207ENST00000461710 KRT83P78385 493 aa12.91□□□□□ -0.34
CDK5RAP1-207ENST00000461710 ZSCAN10Q96SZ4 725 aaPredicted RBP12.91□□□□□ -0.34
CDK5RAP1-207ENST00000461710 LACRTQ9GZZ8 138 aa12.91□□□□□ -0.34
CDK5RAP1-207ENST00000461710 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP1-207ENST00000461710 PDS5AQ29RF7 1337 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP1-207ENST00000461710 RCCD1A6NED2 376 aa12.91□□□□□ -0.34
CDK5RAP1-207ENST00000461710 MINDY4BA8MYZ0 360 aa12.91□□□□□ -0.34
CDK5RAP1-207ENST00000461710 KRT86O43790 486 aa12.91□□□□□ -0.34
CDK5RAP1-207ENST00000461710 PMS1P54277 932 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP1-207ENST00000461710 TROAPQ12815 778 aa12.91□□□□□ -0.34
CDK5RAP1-207ENST00000461710 ADSSL1Q8N142 457 aa12.91□□□□□ -0.34
CDK5RAP1-207ENST00000461710 SDR42E1Q8WUS8 393 aa12.91□□□□□ -0.34
CDK5RAP1-207ENST00000461710 CRACR2AQ9BSW2 395 aa12.91□□□□□ -0.34
CDK5RAP1-207ENST00000461710 GNL3LQ9NVN8 582 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP1-207ENST00000461710 RBM28Q9NW13 759 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP1-207ENST00000461710 TMOD3Q9NYL9 352 aa12.91□□□□□ -0.34
CDK5RAP1-207ENST00000461710 IQSEC3Q9UPP2 1182 aaPredicted RBP12.91□□□□□ -0.34
CDK5RAP1-207ENST00000461710 JRKLQ9Y4A0 524 aa12.91□□□□□ -0.34
CDK5RAP1-207ENST00000461710 DUOX1Q9NRD9 1551 aa12.91□□□□□ -0.34
CDK5RAP1-207ENST00000461710 ANO9A1A5B4 782 aa12.9□□□□□ -0.34
CDK5RAP1-207ENST00000461710 ZNF185O15231 689 aa12.9□□□□□ -0.34
CDK5RAP1-207ENST00000461710 ATF3P18847 181 aa12.9□□□□□ -0.34
CDK5RAP1-207ENST00000461710 EEF1GP26641 437 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP1-207ENST00000461710 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.9□□□□□ -0.34
CDK5RAP1-207ENST00000461710 CATIPQ7Z7H3 387 aa12.9□□□□□ -0.34
CDK5RAP1-207ENST00000461710 KIAA1328Q86T90 577 aa12.9□□□□□ -0.34
CDK5RAP1-207ENST00000461710 TTYH3Q9C0H2 523 aa12.9□□□□□ -0.34
CDK5RAP1-207ENST00000461710 ASAP1Q9ULH1 1129 aa12.9□□□□□ -0.34
CDK5RAP1-207ENST00000461710 DLEC1Q9Y238 1755 aa12.9□□□□□ -0.34
CDK5RAP1-207ENST00000461710 NUP98P52948 1817 aa12.9□□□□□ -0.34
CDK5RAP1-207ENST00000461710 NHSL1Q5SYE7 1610 aa12.9□□□□□ -0.34
CDK5RAP1-207ENST00000461710 IL2RBP14784 551 aa12.9□□□□□ -0.34
CDK5RAP1-207ENST00000461710 MCM7P33993 719 aa12.9□□□□□ -0.34
CDK5RAP1-207ENST00000461710 TRAPPC10P48553 1259 aa12.9□□□□□ -0.34
CDK5RAP1-207ENST00000461710 TSR1Q2NL82 804 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP1-207ENST00000461710 IFIT1BQ5T764 474 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP1-207ENST00000461710 PIK3AP1Q6ZUJ8 805 aa12.9□□□□□ -0.34
CDK5RAP1-207ENST00000461710 TMTC3Q6ZXV5 915 aa12.9□□□□□ -0.34
CDK5RAP1-207ENST00000461710 ADGRA1Q86SQ6 560 aa12.9□□□□□ -0.34
CDK5RAP1-207ENST00000461710 PURBQ96QR8 312 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP1-207ENST00000461710 SOS2Q07890 1332 aaPredicted RBP12.9□□□□□ -0.34
CDK5RAP1-207ENST00000461710 CNTNAP5Q8WYK1 1306 aa12.9□□□□□ -0.34
CDK5RAP1-207ENST00000461710 STARD3NLO95772 234 aa12.89□□□□□ -0.35
CDK5RAP1-207ENST00000461710 BCAMP50895 628 aa12.89□□□□□ -0.35
CDK5RAP1-207ENST00000461710 TADA2BQ86TJ2 420 aa12.89□□□□□ -0.35
CDK5RAP1-207ENST00000461710 FAM76AQ8TAV0 307 aa12.89□□□□□ -0.35
CDK5RAP1-207ENST00000461710 CAGE1Q8TC20 777 aa12.89□□□□□ -0.35
CDK5RAP1-207ENST00000461710 AENQ8WTP8 325 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP1-207ENST00000461710 KAT14Q9H8E8 782 aa12.89□□□□□ -0.35
CDK5RAP1-207ENST00000461710 PES1O00541 588 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP1-207ENST00000461710 CYLC1P35663 651 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP1-207ENST00000461710 GTF2A1P52655 376 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP1-207ENST00000461710 EIF5P55010 431 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP1-207ENST00000461710 THAP9Q9H5L6 903 aa12.89□□□□□ -0.35
CDK5RAP1-207ENST00000461710 AGPAT5Q9NUQ2 364 aa12.89□□□□□ -0.35
CDK5RAP1-207ENST00000461710 A0A087WUV0 522 aaPredicted RBP12.88□□□□□ -0.35
CDK5RAP1-207ENST00000461710 GOLGA6CA6NDK9 693 aa12.88□□□□□ -0.35
CDK5RAP1-207ENST00000461710 GOLGA6BA6NDN3 693 aa12.88□□□□□ -0.35
CDK5RAP1-207ENST00000461710 RASSF10A6NK89 507 aa12.88□□□□□ -0.35
CDK5RAP1-207ENST00000461710 ADAMTS3O15072 1205 aa12.88□□□□□ -0.35
CDK5RAP1-207ENST00000461710 COL5A2P05997 1499 aaPredicted RBP12.88□□□□□ -0.35
CDK5RAP1-207ENST00000461710 GOLGA6DP0CG33 693 aa12.88□□□□□ -0.35
CDK5RAP1-207ENST00000461710 CALM1P0DP23 149 aa12.88□□□□□ -0.35
CDK5RAP1-207ENST00000461710 CALM2P0DP24 149 aa12.88□□□□□ -0.35
CDK5RAP1-207ENST00000461710 CALM3P0DP25 149 aa12.88□□□□□ -0.35
CDK5RAP1-207ENST00000461710 SRGNP10124 158 aa12.88□□□□□ -0.35
CDK5RAP1-207ENST00000461710 DNM2P50570 870 aa12.88□□□□□ -0.35
CDK5RAP1-207ENST00000461710 C2orf54Q08AI8 447 aa12.88□□□□□ -0.35
CDK5RAP1-207ENST00000461710 NHEJ1Q9H9Q4 299 aaPredicted RBP12.88□□□□□ -0.35
CDK5RAP1-207ENST00000461710 GOLGA6AQ9NYA3 693 aa12.88□□□□□ -0.35
CDK5RAP1-207ENST00000461710 LRP2BPQ9P2M1 347 aa12.88□□□□□ -0.35
CDK5RAP1-207ENST00000461710 BAZ2BQ9UIF8 2168 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP1-207ENST00000461710 FAM184BQ9ULE4 1060 aa12.88□□□□□ -0.35
CDK5RAP1-207ENST00000461710 DUSP10Q9Y6W6 482 aa12.88□□□□□ -0.35
CDK5RAP1-207ENST00000461710 BAZ2AQ9UIF9 1905 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP1-207ENST00000461710 CYP7A1P22680 504 aa12.88□□□□□ -0.35
CDK5RAP1-207ENST00000461710 LONP1P36776 959 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP1-207ENST00000461710 STAT6P42226 847 aa12.88□□□□□ -0.35
CDK5RAP1-207ENST00000461710 IRAK1P51617 712 aa12.88□□□□□ -0.35
CDK5RAP1-207ENST00000461710 ARL6IP4Q66PJ3 421 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP1-207ENST00000461710 CERS3Q8IU89 383 aa12.88□□□□□ -0.35
CDK5RAP1-207ENST00000461710 CCDC170Q8IYT3 715 aa12.88□□□□□ -0.35
CDK5RAP1-207ENST00000461710 C4orf32Q8N8J7 132 aa12.88□□□□□ -0.35
CDK5RAP1-207ENST00000461710 B4DLN1 442 aa12.87□□□□□ -0.35
CDK5RAP1-207ENST00000461710 EXOC5O00471 708 aa12.87□□□□□ -0.35
CDK5RAP1-207ENST00000461710 DDAH1O94760 285 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms