RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 Q3C1V9 767 aa10.46□□□□□ -0.73
HDAC9-220ENST00000461409 WDR78Q5VTH9 848 aa10.46□□□□□ -0.73
HDAC9-220ENST00000461409 METTL3Q86U44 580 aaKnown RBP10.46□□□□□ -0.73
HDAC9-220ENST00000461409 LPAR1Q92633 364 aa10.46□□□□□ -0.73
HDAC9-220ENST00000461409 EDC3Q96F86 508 aaKnown RBP10.46□□□□□ -0.73
HDAC9-220ENST00000461409 GPATCH3Q96I76 525 aa10.46□□□□□ -0.73
HDAC9-220ENST00000461409 TANGO6Q9C0B7 1094 aa10.46□□□□□ -0.73
HDAC9-220ENST00000461409 SH2D4AQ9H788 454 aa10.46□□□□□ -0.73
HDAC9-220ENST00000461409 ARMT1Q9H993 441 aa10.46□□□□□ -0.73
HDAC9-220ENST00000461409 OGDHLQ9ULD0 1010 aa10.46□□□□□ -0.73
HDAC9-220ENST00000461409 NAV1Q8NEY1 1877 aa10.46□□□□□ -0.74
HDAC9-220ENST00000461409 CNMDO75829 334 aa10.45□□□□□ -0.74
HDAC9-220ENST00000461409 CACNB2Q08289 660 aaPredicted RBP10.45□□□□□ -0.74
HDAC9-220ENST00000461409 COG2Q14746 738 aa10.45□□□□□ -0.74
HDAC9-220ENST00000461409 MFSD14CQ5VZR4 134 aa10.45□□□□□ -0.74
HDAC9-220ENST00000461409 MB21D1Q8N884 522 aa10.45□□□□□ -0.74
HDAC9-220ENST00000461409 DIS3LQ8TF46 1054 aaKnown RBP10.45□□□□□ -0.74
HDAC9-220ENST00000461409 CCDC17Q96LX7 622 aa10.45□□□□□ -0.74
HDAC9-220ENST00000461409 C11orf49Q9H6J7 331 aa10.45□□□□□ -0.74
HDAC9-220ENST00000461409 ARHGEF10LQ9HCE6 1279 aa10.45□□□□□ -0.74
HDAC9-220ENST00000461409 HOXC10Q9NYD6 342 aa10.45□□□□□ -0.74
HDAC9-220ENST00000461409 A0A1W2PRG0 241 aa10.44□□□□□ -0.74
HDAC9-220ENST00000461409 HOXC6P09630 235 aa10.44□□□□□ -0.74
HDAC9-220ENST00000461409 CYP2D6P10635 497 aa10.44□□□□□ -0.74
HDAC9-220ENST00000461409 ICA1Q05084 483 aa10.44□□□□□ -0.74
HDAC9-220ENST00000461409 GRB14Q14449 540 aa10.44□□□□□ -0.74
HDAC9-220ENST00000461409 CCL14Q16627 93 aa10.44□□□□□ -0.74
HDAC9-220ENST00000461409 TJAP1Q5JTD0 557 aa10.44□□□□□ -0.74
HDAC9-220ENST00000461409 C12orf60Q5U649 245 aa10.44□□□□□ -0.74
HDAC9-220ENST00000461409 SLC44A5Q8NCS7 719 aa10.44□□□□□ -0.74
HDAC9-220ENST00000461409 PRO3102Q9H379 93 aa10.44□□□□□ -0.74
HDAC9-220ENST00000461409 ECHDC1Q9NTX5 307 aa10.44□□□□□ -0.74
HDAC9-220ENST00000461409 BTBD7Q9P203 1132 aa10.44□□□□□ -0.74
HDAC9-220ENST00000461409 SLC4A4Q9Y6R1 1079 aa10.44□□□□□ -0.74
HDAC9-220ENST00000461409 PLXNB2O15031 1838 aa10.44□□□□□ -0.74
HDAC9-220ENST00000461409 USP17L12C9JPN9 530 aa10.43□□□□□ -0.74
HDAC9-220ENST00000461409 USP17L21D6R901 530 aa10.43□□□□□ -0.74
HDAC9-220ENST00000461409 PRKAB2O43741 272 aa10.43□□□□□ -0.74
HDAC9-220ENST00000461409 STRNO43815 780 aa10.43□□□□□ -0.74
HDAC9-220ENST00000461409 MSCO60682 206 aa10.43□□□□□ -0.74
HDAC9-220ENST00000461409 ATP2B2Q01814 1243 aa10.43□□□□□ -0.74
HDAC9-220ENST00000461409 C20orf194Q5TEA3 1177 aa10.43□□□□□ -0.74
HDAC9-220ENST00000461409 C16orf86Q6ZW13 317 aa10.43□□□□□ -0.74
HDAC9-220ENST00000461409 C7orf61Q8IZ16 206 aa10.43□□□□□ -0.74
HDAC9-220ENST00000461409 SHCBP1Q8NEM2 672 aa10.43□□□□□ -0.74
HDAC9-220ENST00000461409 DYNLL2Q96FJ2 89 aa10.43□□□□□ -0.74
HDAC9-220ENST00000461409 TULP1O00294 542 aaPredicted RBP10.42□□□□□ -0.74
HDAC9-220ENST00000461409 WDR46O15213 610 aaKnown RBP10.42□□□□□ -0.74
HDAC9-220ENST00000461409 SMARCA5O60264 1052 aaPredicted RBP10.42□□□□□ -0.74
HDAC9-220ENST00000461409 FLOT1O75955 427 aa10.42□□□□□ -0.74
HDAC9-220ENST00000461409 AKR1B1P15121 316 aa10.42□□□□□ -0.74
HDAC9-220ENST00000461409 CCND3P30281 292 aaPredicted RBP10.42□□□□□ -0.74
HDAC9-220ENST00000461409 SLC4A3P48751 1232 aa10.42□□□□□ -0.74
HDAC9-220ENST00000461409 CDK8P49336 464 aa10.42□□□□□ -0.74
HDAC9-220ENST00000461409 LRRFIP1Q32MZ4 808 aaKnown RBP10.42□□□□□ -0.74
HDAC9-220ENST00000461409 SLFNL1Q499Z3 407 aa10.42□□□□□ -0.74
HDAC9-220ENST00000461409 GIMAP6Q6P9H5 292 aa10.42□□□□□ -0.74
HDAC9-220ENST00000461409 DPP9Q86TI2 863 aa10.42□□□□□ -0.74
HDAC9-220ENST00000461409 MTRQ99707 1265 aa10.42□□□□□ -0.74
HDAC9-220ENST00000461409 MOV10L1Q9BXT6 1211 aaKnown RBP10.42□□□□□ -0.74
HDAC9-220ENST00000461409 SPATC1LQ9H0A9 340 aa10.42□□□□□ -0.74
HDAC9-220ENST00000461409 MROH8Q9H579 483 aa10.42□□□□□ -0.74
HDAC9-220ENST00000461409 VCPKMTQ9H867 229 aa10.42□□□□□ -0.74
HDAC9-220ENST00000461409 KANSL2Q9H9L4 492 aa10.42□□□□□ -0.74
HDAC9-220ENST00000461409 SLC5A4Q9NY91 659 aa10.42□□□□□ -0.74
HDAC9-220ENST00000461409 ARPP21Q9UBL0 812 aaPredicted RBP10.42□□□□□ -0.74
HDAC9-220ENST00000461409 TMX2Q9Y320 296 aa10.42□□□□□ -0.74
HDAC9-220ENST00000461409 SZT2Q5T011 3432 aa10.42□□□□□ -0.74
HDAC9-220ENST00000461409 CYP2D7A0A087X1C5 515 aa10.41□□□□□ -0.74
HDAC9-220ENST00000461409 ZFYP08048 801 aaPredicted RBP10.41□□□□□ -0.74
HDAC9-220ENST00000461409 COL6A1P12109 1028 aa10.41□□□□□ -0.74
HDAC9-220ENST00000461409 ADORA2AP29274 412 aa10.41□□□□□ -0.74
HDAC9-220ENST00000461409 CTR9Q6PD62 1173 aa10.41□□□□□ -0.74
HDAC9-220ENST00000461409 ABRAQ8N0Z2 381 aa10.41□□□□□ -0.74
HDAC9-220ENST00000461409 SPICE1Q8N0Z3 855 aa10.41□□□□□ -0.74
HDAC9-220ENST00000461409 KBTBD3Q8NAB2 608 aa10.41□□□□□ -0.74
HDAC9-220ENST00000461409 PUS7LQ9H0K6 701 aaKnown RBP10.41□□□□□ -0.74
HDAC9-220ENST00000461409 GOPCQ9HD26 462 aa10.41□□□□□ -0.74
HDAC9-220ENST00000461409 STAP2Q9UGK3 403 aa10.41□□□□□ -0.74
HDAC9-220ENST00000461409 DNAH12Q6ZR08 3092 aa10.4□□□□□ -0.74
HDAC9-220ENST00000461409 PFASO15067 1338 aa10.4□□□□□ -0.74
HDAC9-220ENST00000461409 SLC25A27O95847 323 aa10.4□□□□□ -0.74
HDAC9-220ENST00000461409 EEF2P13639 858 aaKnown RBP10.4□□□□□ -0.74
HDAC9-220ENST00000461409 ERCC3P19447 782 aa10.4□□□□□ -0.74
HDAC9-220ENST00000461409 CNGA1P29973 690 aa10.4□□□□□ -0.74
HDAC9-220ENST00000461409 BMP8BP34820 402 aa10.4□□□□□ -0.74
HDAC9-220ENST00000461409 PLS1Q14651 629 aa10.4□□□□□ -0.74
HDAC9-220ENST00000461409 KIAA1755Q5JYT7 1200 aa10.4□□□□□ -0.74
HDAC9-220ENST00000461409 OLFML2BQ68BL8 750 aa10.4□□□□□ -0.74
HDAC9-220ENST00000461409 CLEC10AQ8IUN9 316 aa10.4□□□□□ -0.74
HDAC9-220ENST00000461409 SIAH1Q8IUQ4 282 aa10.4□□□□□ -0.74
HDAC9-220ENST00000461409 APPBP2Q92624 585 aa10.4□□□□□ -0.74
HDAC9-220ENST00000461409 STRBPQ96SI9 672 aaKnown RBP10.4□□□□□ -0.74
HDAC9-220ENST00000461409 DCTPP1Q9H773 170 aa10.4□□□□□ -0.74
HDAC9-220ENST00000461409 ZNF287Q9HBT7 754 aa10.4□□□□□ -0.74
HDAC9-220ENST00000461409 FLRT1Q9NZU1 646 aa10.4□□□□□ -0.74
HDAC9-220ENST00000461409 DDX20Q9UHI6 824 aaKnown RBP10.4□□□□□ -0.74
HDAC9-220ENST00000461409 LAMA3Q16787 3333 aa10.4□□□□□ -0.74
HDAC9-220ENST00000461409 ZNF236Q9UL36 1845 aa10.4□□□□□ -0.75
HDAC9-220ENST00000461409 DNM1LO00429 736 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms