RNA–Protein interactions for RNA: ENST00000461343.1

LSG1-205, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 428 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-205ENST00000461343 LINC00301Q8NCQ3 95 aa8.54□□□□□ -1.04
LSG1-205ENST00000461343 MRPS27Q92552 414 aaKnown RBP8.54□□□□□ -1.04
LSG1-205ENST00000461343 CUL5Q93034 780 aa8.54□□□□□ -1.04
LSG1-205ENST00000461343 AMNQ9BXJ7 453 aa8.54□□□□□ -1.04
LSG1-205ENST00000461343 RAB34Q9BZG1 259 aa8.54□□□□□ -1.04
LSG1-205ENST00000461343 TMEM39BQ9GZU3 492 aa8.54□□□□□ -1.04
LSG1-205ENST00000461343 DNAJC18Q9H819 358 aa8.54□□□□□ -1.04
LSG1-205ENST00000461343 USP25Q9UHP3 1055 aa8.54□□□□□ -1.04
LSG1-205ENST00000461343 CTDP1Q9Y5B0 961 aaPredicted RBP8.54□□□□□ -1.04
LSG1-205ENST00000461343 STK24Q9Y6E0 443 aa8.54□□□□□ -1.04
LSG1-205ENST00000461343 ZNF541Q9H0D2 1346 aa8.54□□□□□ -1.04
LSG1-205ENST00000461343 ADAMTSL1Q8N6G6 1762 aa8.53□□□□□ -1.04
LSG1-205ENST00000461343 MYH15Q9Y2K3 1946 aa8.53□□□□□ -1.04
LSG1-205ENST00000461343 MYH4Q9Y623 1939 aa8.53□□□□□ -1.04
LSG1-205ENST00000461343 WDR46O15213 610 aaKnown RBP8.53□□□□□ -1.04
LSG1-205ENST00000461343 GCFC2P16383 781 aaKnown RBP8.53□□□□□ -1.04
LSG1-205ENST00000461343 CMA1P23946 247 aa8.53□□□□□ -1.04
LSG1-205ENST00000461343 IREB2P48200 963 aaKnown RBP8.53□□□□□ -1.04
LSG1-205ENST00000461343 FAM160A1Q05DH4 1040 aa8.53□□□□□ -1.04
LSG1-205ENST00000461343 AP3B2Q13367 1082 aa8.53□□□□□ -1.04
LSG1-205ENST00000461343 NONOQ15233 471 aaKnown RBP eCLIP8.53□□□□□ -1.04
LSG1-205ENST00000461343 FOXD4L6Q3SYB3 417 aaPredicted RBP8.53□□□□□ -1.04
LSG1-205ENST00000461343 NOL9Q5SY16 702 aaKnown RBP8.53□□□□□ -1.04
LSG1-205ENST00000461343 SYDE2Q5VT97 1194 aa8.53□□□□□ -1.04
LSG1-205ENST00000461343 CAVIN1Q6NZI2 390 aaKnown RBP8.53□□□□□ -1.04
LSG1-205ENST00000461343 BTNL9Q6UXG8 535 aa8.53□□□□□ -1.04
LSG1-205ENST00000461343 FOXD4L3Q6VB84 417 aaPredicted RBP8.53□□□□□ -1.04
LSG1-205ENST00000461343 ZFPM1Q8IX07 1006 aa8.53□□□□□ -1.04
LSG1-205ENST00000461343 WDR18Q9BV38 432 aa8.53□□□□□ -1.04
LSG1-205ENST00000461343 GTPBP4Q9BZE4 634 aaKnown RBP8.53□□□□□ -1.04
LSG1-205ENST00000461343 KIAA1683Q9H0B3 1180 aa8.53□□□□□ -1.04
LSG1-205ENST00000461343 VCPKMTQ9H867 229 aa8.53□□□□□ -1.04
LSG1-205ENST00000461343 MAP3K20Q9NYL2 800 aaKnown RBP8.53□□□□□ -1.04
LSG1-205ENST00000461343 VPS54Q9P1Q0 977 aa8.53□□□□□ -1.04
LSG1-205ENST00000461343 CSADQ9Y600 493 aa8.53□□□□□ -1.04
LSG1-205ENST00000461343 SBF1O95248 1867 aa8.52□□□□□ -1.05
LSG1-205ENST00000461343 SMCO2A6NFE2 343 aa8.52□□□□□ -1.05
LSG1-205ENST00000461343 BTBD18B2RXH4 712 aa8.52□□□□□ -1.05
LSG1-205ENST00000461343 USP17L10C9JJH3 530 aa8.52□□□□□ -1.05
LSG1-205ENST00000461343 STXBP3O00186 592 aa8.52□□□□□ -1.05
LSG1-205ENST00000461343 SLC26A4O43511 780 aa8.52□□□□□ -1.05
LSG1-205ENST00000461343 RAD21O60216 631 aa8.52□□□□□ -1.05
LSG1-205ENST00000461343 GDF11O95390 407 aa8.52□□□□□ -1.05
LSG1-205ENST00000461343 NDUFB10O96000 172 aa8.52□□□□□ -1.05
LSG1-205ENST00000461343 MRE11P49959 708 aa8.52□□□□□ -1.05
LSG1-205ENST00000461343 FOSBP53539 338 aa8.52□□□□□ -1.05
LSG1-205ENST00000461343 SEMA3FQ13275 785 aa8.52□□□□□ -1.05
LSG1-205ENST00000461343 MAP3K11Q16584 847 aa8.52□□□□□ -1.05
LSG1-205ENST00000461343 ANGEL2Q5VTE6 544 aaKnown RBP8.52□□□□□ -1.05
LSG1-205ENST00000461343 SAMD7Q7Z3H4 446 aa8.52□□□□□ -1.05
LSG1-205ENST00000461343 FBXO11Q86XK2 927 aa8.52□□□□□ -1.05
LSG1-205ENST00000461343 HOMER1Q86YM7 354 aa8.52□□□□□ -1.05
LSG1-205ENST00000461343 ELOA2Q8IYF1 753 aaPredicted RBP8.52□□□□□ -1.05
LSG1-205ENST00000461343 SCYL3Q8IZE3 742 aa8.52□□□□□ -1.05
LSG1-205ENST00000461343 ADGRF4Q8IZF3 695 aa8.52□□□□□ -1.05
LSG1-205ENST00000461343 MTMR8Q96EF0 704 aa8.52□□□□□ -1.05
LSG1-205ENST00000461343 AK8Q96MA6 479 aa8.52□□□□□ -1.05
LSG1-205ENST00000461343 TIGD1Q96MW7 591 aa8.52□□□□□ -1.05
LSG1-205ENST00000461343 USP28Q96RU2 1077 aa8.52□□□□□ -1.05
LSG1-205ENST00000461343 NUP62CLQ9H1M0 184 aa8.52□□□□□ -1.05
LSG1-205ENST00000461343 RIC8AQ9NPQ8 531 aa8.52□□□□□ -1.05
LSG1-205ENST00000461343 GGA3Q9NZ52 723 aa8.52□□□□□ -1.05
LSG1-205ENST00000461343 TMOD4Q9NZQ9 345 aa8.52□□□□□ -1.05
LSG1-205ENST00000461343 TFIP11Q9UBB9 837 aaKnown RBP8.52□□□□□ -1.05
LSG1-205ENST00000461343 ZNF112Q9UJU3 913 aa8.52□□□□□ -1.05
LSG1-205ENST00000461343 TCHHQ07283 1943 aa8.51□□□□□ -1.05
LSG1-205ENST00000461343 GLTPD2A6NH11 291 aa8.51□□□□□ -1.05
LSG1-205ENST00000461343 SMIM22K7EJ46 135 aa8.51□□□□□ -1.05
LSG1-205ENST00000461343 CCDC192P0DO97 292 aa8.51□□□□□ -1.05
LSG1-205ENST00000461343 HOXA7P31268 230 aaPredicted RBP8.51□□□□□ -1.05
LSG1-205ENST00000461343 GUCY1A2P33402 732 aa8.51□□□□□ -1.05
LSG1-205ENST00000461343 PRPHP41219 470 aa8.51□□□□□ -1.05
LSG1-205ENST00000461343 EVX2Q03828 476 aa8.51□□□□□ -1.05
LSG1-205ENST00000461343 TMEM266Q2M3C6 531 aa8.51□□□□□ -1.05
LSG1-205ENST00000461343 ZSCAN23Q3MJ62 389 aa8.51□□□□□ -1.05
LSG1-205ENST00000461343 TTC38Q5R3I4 469 aa8.51□□□□□ -1.05
LSG1-205ENST00000461343 WWC2Q6AWC2 1192 aa8.51□□□□□ -1.05
LSG1-205ENST00000461343 MOXD1Q6UVY6 613 aa8.51□□□□□ -1.05
LSG1-205ENST00000461343 MCF2L2Q86YR7 1114 aa8.51□□□□□ -1.05
LSG1-205ENST00000461343 STAG2Q8N3U4 1231 aa8.51□□□□□ -1.05
LSG1-205ENST00000461343 PRPF38AQ8NAV1 312 aaKnown RBP8.51□□□□□ -1.05
LSG1-205ENST00000461343 NKX2-3Q8TAU0 364 aa8.51□□□□□ -1.05
LSG1-205ENST00000461343 TEPSINQ96N21 525 aa8.51□□□□□ -1.05
LSG1-205ENST00000461343 NAT10Q9H0A0 1025 aaKnown RBP8.51□□□□□ -1.05
LSG1-205ENST00000461343 TNMDQ9H2S6 317 aa8.51□□□□□ -1.05
LSG1-205ENST00000461343 PSTPIP2Q9H939 334 aa8.51□□□□□ -1.05
LSG1-205ENST00000461343 GPCPD1Q9NPB8 672 aa8.51□□□□□ -1.05
LSG1-205ENST00000461343 KCNJ14Q9UNX9 436 aa8.51□□□□□ -1.05
LSG1-205ENST00000461343 MTMR7Q9Y216 660 aa8.51□□□□□ -1.05
LSG1-205ENST00000461343 MRPL11Q9Y3B7 192 aaKnown RBP8.51□□□□□ -1.05
LSG1-205ENST00000461343 PCDHAC2Q9Y5I4 1007 aa8.51□□□□□ -1.05
LSG1-205ENST00000461343 SRPRBQ9Y5M8 271 aaKnown RBP8.51□□□□□ -1.05
LSG1-205ENST00000461343 SIPA1L1O43166 1804 aa8.51□□□□□ -1.05
LSG1-205ENST00000461343 SCN4AP35499 1836 aa8.51□□□□□ -1.05
LSG1-205ENST00000461343 ABCB11O95342 1321 aa8.51□□□□□ -1.05
LSG1-205ENST00000461343 FRMPD2Q68DX3 1309 aaPredicted RBP8.51□□□□□ -1.05
LSG1-205ENST00000461343 MYPNQ86TC9 1320 aa8.51□□□□□ -1.05
LSG1-205ENST00000461343 SPDYE3A6NKU9 549 aa8.5□□□□□ -1.05
LSG1-205ENST00000461343 PHF20L1A8MW92 1017 aa8.5□□□□□ -1.05
LSG1-205ENST00000461343 TMEM232C9JQI7 657 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms